; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

ClCG05G009840 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG05G009840
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Descriptioncytochrome b-c1 complex subunit 6-like
Genome locationCG_Chr05:10913548..10917603
RNA-Seq ExpressionClCG05G009840
SyntenyClCG05G009840
Gene Ontology termsGO:0006122 - mitochondrial electron transport, ubiquinol to cytochrome c (biological process)
GO:0005750 - mitochondrial respiratory chain complex III (cellular component)
InterPro domainsIPR003422 - Cytochrome b-c1 complex, subunit 6
IPR023184 - Ubiquinol-cytochrome C reductase hinge domain
IPR036811 - Ubiquinol-cytochrome C reductase hinge domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6576964.1 Cytochrome b-c1 complex subunit 6-1, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]6.7e-3263.03Show/hide
Query:  FLFGIHKFLNHYFSPASSSLWSEELLRADEEPVDQKRYLEEACKPKCVKPLLEYQDVFSLKSGTIYFVSHIWVSADDLLACVKRIQGDDSGHKHCTGQYF
        F+F +  FL++ F+P+   L    L  ADEEPVDQKRYLEEACKPKCVKPLLEYQ                        ACVKRIQGD+SGHKHCTGQYF
Subjt:  FLFGIHKFLNHYFSPASSSLWSEELLRADEEPVDQKRYLEEACKPKCVKPLLEYQDVFSLKSGTIYFVSHIWVSADDLLACVKRIQGDDSGHKHCTGQYF

Query:  DYWSCIDKCVAPKLFTKLK
        DYWSCIDKCVAPKLFTKLK
Subjt:  DYWSCIDKCVAPKLFTKLK

KAG6600342.1 Cytochrome b-c1 complex subunit 6-1, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]2.2e-3064.29Show/hide
Query:  FLNHYFSPASSSLWSEELLRADEEPVDQKRYLEEACKPKCVKPLLEYQDVFSLKSGTIYFVSHIWVSADDLLACVKRIQGDDSGHKHCTGQYFDYWSCID
        FL   F+P+   L    L  ADEEPVDQKRYLEEACKPKCVKPLLEYQ                        ACVKRIQGDDSGHKHCTGQYFDYWSC+D
Subjt:  FLNHYFSPASSSLWSEELLRADEEPVDQKRYLEEACKPKCVKPLLEYQDVFSLKSGTIYFVSHIWVSADDLLACVKRIQGDDSGHKHCTGQYFDYWSCID

Query:  KCVAPKLFTKLK
        KCVAPKLFTK+K
Subjt:  KCVAPKLFTKLK

KAG7014985.1 hypothetical protein SDJN02_22616, partial [Cucurbita argyrosperma subsp. argyrosperma]5.7e-3163.48Show/hide
Query:  IHKFLNHYFSPASSSLWSEELLRADEEPVDQKRYLEEACKPKCVKPLLEYQDVFSLKSGTIYFVSHIWVSADDLLACVKRIQGDDSGHKHCTGQYFDYWS
        +  FL++ F+P+   L    L  ADEEPVDQKRYLEEACKPKCVKPLLEYQ                        ACVKRIQGD+SGHKHCTGQYFDYWS
Subjt:  IHKFLNHYFSPASSSLWSEELLRADEEPVDQKRYLEEACKPKCVKPLLEYQDVFSLKSGTIYFVSHIWVSADDLLACVKRIQGDDSGHKHCTGQYFDYWS

Query:  CIDKCVAPKLFTKLK
        CIDKCVAPKLFTKLK
Subjt:  CIDKCVAPKLFTKLK

KAG7030998.1 hypothetical protein SDJN02_05037 [Cucurbita argyrosperma subsp. argyrosperma]1.2e-3347.87Show/hide
Query:  EDLSYCNFSASKLNLIRVPSFLPDSCFSSEIRVYFPPFLDRADWFSCVLFCSNSVSVISDTSAVLLAFTFLFGIHKFLNHYFSPASSSLWSEELLRADEE
        E LS CNFS SKLNL RV   L  SCFSS+  + F  +                                         HY      +L       ADEE
Subjt:  EDLSYCNFSASKLNLIRVPSFLPDSCFSSEIRVYFPPFLDRADWFSCVLFCSNSVSVISDTSAVLLAFTFLFGIHKFLNHYFSPASSSLWSEELLRADEE

Query:  PVDQKRYLEEACKPKCVKPLLEYQDVFSLKSGTIYFVSHIWVSADDLLACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAPKLFTKLK
        PVDQKRYLEEACKPKCVKPLLEYQ                        ACVKRIQGDDSGHKHCTGQYFDYWSC+DKCVAPKLFTK+K
Subjt:  PVDQKRYLEEACKPKCVKPLLEYQDVFSLKSGTIYFVSHIWVSADDLLACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAPKLFTKLK

XP_022942987.1 cytochrome b-c1 complex subunit 6-like [Cucurbita moschata]1.7e-3061.34Show/hide
Query:  FLFGIHKFLNHYFSPASSSLWSEELLRADEEPVDQKRYLEEACKPKCVKPLLEYQDVFSLKSGTIYFVSHIWVSADDLLACVKRIQGDDSGHKHCTGQYF
        F+  +  FL   F+P+   L    L  ADEEPVDQKRYLEEACKPKCVKPLLEYQ                        ACVKRIQGDDSGHKHCTGQYF
Subjt:  FLFGIHKFLNHYFSPASSSLWSEELLRADEEPVDQKRYLEEACKPKCVKPLLEYQDVFSLKSGTIYFVSHIWVSADDLLACVKRIQGDDSGHKHCTGQYF

Query:  DYWSCIDKCVAPKLFTKLK
        DYWSC+DKCVAPKLFTK+K
Subjt:  DYWSCIDKCVAPKLFTKLK

TrEMBL top hitse value%identityAlignment
A0A1S3C350 Cytochrome b-c1 complex subunit 65.2e-3073.91Show/hide
Query:  ADEEPVDQKRYLEEACKPKCVKPLLEYQDVFSLKSGTIYFVSHIWVSADDLLACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAPKLFTKLK
        ADEEPVDQKRYLEEACKPKCVKPLLEYQ                        ACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAPKLFTKLK
Subjt:  ADEEPVDQKRYLEEACKPKCVKPLLEYQDVFSLKSGTIYFVSHIWVSADDLLACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAPKLFTKLK

A0A6J1E3D4 Cytochrome b-c1 complex subunit 61.5e-2972.83Show/hide
Query:  ADEEPVDQKRYLEEACKPKCVKPLLEYQDVFSLKSGTIYFVSHIWVSADDLLACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAPKLFTKLK
        ADEEPVDQKRYLEEACKPKCVKPLLEYQ                        ACVKRIQGD+SGHKHCTGQYFDYWSCIDKCVAPKLFTKLK
Subjt:  ADEEPVDQKRYLEEACKPKCVKPLLEYQDVFSLKSGTIYFVSHIWVSADDLLACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAPKLFTKLK

A0A6J1FRR8 cytochrome b-c1 complex subunit 6-like8.0e-3161.34Show/hide
Query:  FLFGIHKFLNHYFSPASSSLWSEELLRADEEPVDQKRYLEEACKPKCVKPLLEYQDVFSLKSGTIYFVSHIWVSADDLLACVKRIQGDDSGHKHCTGQYF
        F+  +  FL   F+P+   L    L  ADEEPVDQKRYLEEACKPKCVKPLLEYQ                        ACVKRIQGDDSGHKHCTGQYF
Subjt:  FLFGIHKFLNHYFSPASSSLWSEELLRADEEPVDQKRYLEEACKPKCVKPLLEYQDVFSLKSGTIYFVSHIWVSADDLLACVKRIQGDDSGHKHCTGQYF

Query:  DYWSCIDKCVAPKLFTKLK
        DYWSC+DKCVAPKLFTK+K
Subjt:  DYWSCIDKCVAPKLFTKLK

A0A6J1J694 Cytochrome b-c1 complex subunit 61.2e-2971.74Show/hide
Query:  ADEEPVDQKRYLEEACKPKCVKPLLEYQDVFSLKSGTIYFVSHIWVSADDLLACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAPKLFTKLK
        ADEEPVDQKRYLEEACKPKCVKPLLEYQ                        ACVKRIQGDDSGHKHCTGQYFDYWSC+DKCVAPKLFTK+K
Subjt:  ADEEPVDQKRYLEEACKPKCVKPLLEYQDVFSLKSGTIYFVSHIWVSADDLLACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAPKLFTKLK

A0A6J1J7A4 Cytochrome b-c1 complex subunit 61.5e-2972.83Show/hide
Query:  ADEEPVDQKRYLEEACKPKCVKPLLEYQDVFSLKSGTIYFVSHIWVSADDLLACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAPKLFTKLK
        ADEEPVDQKRYLEEACKPKCVKPLLEYQ                        ACVKRIQGD+SGHKHCTGQYFDYWSCIDKCVAPKLFTKLK
Subjt:  ADEEPVDQKRYLEEACKPKCVKPLLEYQDVFSLKSGTIYFVSHIWVSADDLLACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAPKLFTKLK

SwissProt top hitse value%identityAlignment
P48504 Cytochrome b-c1 complex subunit 62.5e-2154.35Show/hide
Query:  ADEEPVDQKRYLEEACKPKCVKPLLEYQDVFSLKSGTIYFVSHIWVSADDLLACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAPKLFTKLK
        +DEE VD K  LE +CKPKCV+ L EYQ                        AC KR++GD+SGHKHCTGQYFDYW CIDKCVA KLF  LK
Subjt:  ADEEPVDQKRYLEEACKPKCVKPLLEYQDVFSLKSGTIYFVSHIWVSADDLLACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAPKLFTKLK

Q0WWE3 Cytochrome b-c1 complex subunit 6-1, mitochondrial9.4e-2966.3Show/hide
Query:  ADEEPVDQKRYLEEACKPKCVKPLLEYQDVFSLKSGTIYFVSHIWVSADDLLACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAPKLFTKLK
        AD+E VD K+YLEE+CKPKCVKPLLEYQ                        ACVKRIQGDDSGHKHCTGQYFDYW CIDKCVAPKLF KLK
Subjt:  ADEEPVDQKRYLEEACKPKCVKPLLEYQDVFSLKSGTIYFVSHIWVSADDLLACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAPKLFTKLK

Q9SJV7 Cytochrome b-c1 complex subunit 6-2, mitochondrial2.9e-2259.04Show/hide
Query:  DEEPVDQKRYLEEACKPKCVKPLLEYQDVFSLKSGTIYFVSHIWVSADDLLACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVA
        +E+ VDQKRY EE+CKPKCVKPLLEYQ                        ACVKRIQ D+SGHKHCTGQYFDYW C+DKCV+
Subjt:  DEEPVDQKRYLEEACKPKCVKPLLEYQDVFSLKSGTIYFVSHIWVSADDLLACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVA

Arabidopsis top hitse value%identityAlignment
AT1G15120.1 Ubiquinol-cytochrome C reductase hinge protein6.7e-3066.3Show/hide
Query:  ADEEPVDQKRYLEEACKPKCVKPLLEYQDVFSLKSGTIYFVSHIWVSADDLLACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAPKLFTKLK
        AD+E VD K+YLEE+CKPKCVKPLLEYQ                        ACVKRIQGDDSGHKHCTGQYFDYW CIDKCVAPKLF KLK
Subjt:  ADEEPVDQKRYLEEACKPKCVKPLLEYQDVFSLKSGTIYFVSHIWVSADDLLACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAPKLFTKLK

AT1G15120.2 Ubiquinol-cytochrome C reductase hinge protein7.7e-2659.18Show/hide
Query:  SPASSSLWSEELL--RADEEPVDQKRYLEEACKPKCVKPLLEYQDVFSLKSGTIYFVSHIWVSADDLLACVKRIQGDDSGHKHCTGQYFDYWSCIDKC
        SP S S++S +L    AD+E VD K+YLEE+CKPKCVKPLLEYQ                        ACVKRIQGDDSGHKHCTGQYFDYW CIDKC
Subjt:  SPASSSLWSEELL--RADEEPVDQKRYLEEACKPKCVKPLLEYQDVFSLKSGTIYFVSHIWVSADDLLACVKRIQGDDSGHKHCTGQYFDYWSCIDKC

AT2G01090.1 Ubiquinol-cytochrome C reductase hinge protein2.1e-2359.04Show/hide
Query:  DEEPVDQKRYLEEACKPKCVKPLLEYQDVFSLKSGTIYFVSHIWVSADDLLACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVA
        +E+ VDQKRY EE+CKPKCVKPLLEYQ                        ACVKRIQ D+SGHKHCTGQYFDYW C+DKCV+
Subjt:  DEEPVDQKRYLEEACKPKCVKPLLEYQDVFSLKSGTIYFVSHIWVSADDLLACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVA

AT2G01090.2 Ubiquinol-cytochrome C reductase hinge protein2.1e-2359.04Show/hide
Query:  DEEPVDQKRYLEEACKPKCVKPLLEYQDVFSLKSGTIYFVSHIWVSADDLLACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVA
        +E+ VDQKRY EE+CKPKCVKPLLEYQ                        ACVKRIQ D+SGHKHCTGQYFDYW C+DKCV+
Subjt:  DEEPVDQKRYLEEACKPKCVKPLLEYQDVFSLKSGTIYFVSHIWVSADDLLACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GAAGATTTGTCATATTGCAATTTCTCAGCTTCGAAACTAAACCTAATCAGAGTTCCTAGTTTCCTCCCAGATTCGTGTTTCAGCTCCGAGATCCGTGTTTACTTTCCTCC
ATTCCTCGATCGCGCGGATTGGTTTTCTTGCGTGTTATTTTGCTCCAATTCAGTATCAGTTATTAGCGATACAAGTGCTGTTTTGTTAGCGTTTACATTCTTATTTGGCA
TTCATAAATTTCTGAATCACTATTTCTCCCCCGCAAGTAGCTCATTGTGGTCTGAAGAGTTATTAAGGGCGGATGAAGAACCCGTTGATCAGAAGAGGTATCTTGAAGAA
GCTTGCAAACCCAAGTGTGTGAAACCACTACTTGAATATCAGGATGTGTTTTCCCTGAAAAGTGGCACAATTTATTTCGTCTCTCATATCTGGGTTTCAGCTGATGACTT
GTTGGCGTGCGTGAAGAGAATTCAAGGGGATGACAGTGGTCATAAGCATTGCACTGGACAATATTTTGATTACTGGTCTTGCATTGACAAATGTGTTGCACCAAAACTAT
TTACGAAACTTAAGTAA
mRNA sequenceShow/hide mRNA sequence
GAAGATTTGTCATATTGCAATTTCTCAGCTTCGAAACTAAACCTAATCAGAGTTCCTAGTTTCCTCCCAGATTCGTGTTTCAGCTCCGAGATCCGTGTTTACTTTCCTCC
ATTCCTCGATCGCGCGGATTGGTTTTCTTGCGTGTTATTTTGCTCCAATTCAGTATCAGTTATTAGCGATACAAGTGCTGTTTTGTTAGCGTTTACATTCTTATTTGGCA
TTCATAAATTTCTGAATCACTATTTCTCCCCCGCAAGTAGCTCATTGTGGTCTGAAGAGTTATTAAGGGCGGATGAAGAACCCGTTGATCAGAAGAGGTATCTTGAAGAA
GCTTGCAAACCCAAGTGTGTGAAACCACTACTTGAATATCAGGATGTGTTTTCCCTGAAAAGTGGCACAATTTATTTCGTCTCTCATATCTGGGTTTCAGCTGATGACTT
GTTGGCGTGCGTGAAGAGAATTCAAGGGGATGACAGTGGTCATAAGCATTGCACTGGACAATATTTTGATTACTGGTCTTGCATTGACAAATGTGTTGCACCAAAACTAT
TTACGAAACTTAAGTAATGGAGAGTTGTTAGGGATGTGGGGATCCTATCCTTTTGGTTGCAGCATTTTTCTGATTTTTTATGCAATGTCGTTTTGTGGACTTGATTTTTG
CATCTACAAAAAATGCCAAGGGCTGTGCAATGTTATAAAAACTATGATAGACCTTTAACCATGGTCAATAAGAAAGGATCTTGGATTCATGTTTCGAGCTTGTGAAAACT
TCTTGAATATTGTGATTGCTCTCTATAAACATTAGTGATCGATCAAAT
Protein sequenceShow/hide protein sequence
EDLSYCNFSASKLNLIRVPSFLPDSCFSSEIRVYFPPFLDRADWFSCVLFCSNSVSVISDTSAVLLAFTFLFGIHKFLNHYFSPASSSLWSEELLRADEEPVDQKRYLEE
ACKPKCVKPLLEYQDVFSLKSGTIYFVSHIWVSADDLLACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAPKLFTKLK