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ClCG05G009870 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG05G009870
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionTubby-like F-box protein
Genome locationCG_Chr05:10943773..10947626
RNA-Seq ExpressionClCG05G009870
SyntenyClCG05G009870
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8650509.1 hypothetical protein Csa_010751 [Cucumis sativus]4.3e-1381.48Show/hide
Query:  AAAAILCFLLLSAAAVAVSADAADCIDGCFTACVQKDTRLMQRCEGKCRIKCGP
        +A AILC LLLS A V VSADAADCIDGCFTACVQKD+R MQRCE KC IKCGP
Subjt:  AAAAILCFLLLSAAAVAVSADAADCIDGCFTACVQKDTRLMQRCEGKCRIKCGP
KAE9595095.1 hypothetical protein Lalb_Chr18g0060771 [Lupinus albus]5.3e-1150.75Show/hide
Query:  MEKPAAAAILCFLLLSAAAVAVSADAADCIDGCFTACVQKDTRLMQRCEGKCRIKCGPDNEVDENLT
        M+K   A I+   ++ +    V++DA+DC+D C TACVQ+DTRLMQRC+ KC+IKCGPD++V+E+++
Subjt:  MEKPAAAAILCFLLLSAAAVAVSADAADCIDGCFTACVQKDTRLMQRCEGKCRIKCGPDNEVDENLT
KAG6600340.1 hypothetical protein SDJN03_05573, partial [Cucurbita argyrosperma subsp. sororia]6.9e-1980.3Show/hide
Query:  MEKPAAA---AILCFLLLSAAAVAVSADAADCIDGCFTACVQKDTRLMQRCEGKCRIKCGPDNEVD
        M+K  AA   AILCF+LLSAAA  VSADAADCIDGCFTACVQKDTRLMQRCEGKCRIKCGPD + +
Subjt:  MEKPAAA---AILCFLLLSAAAVAVSADAADCIDGCFTACVQKDTRLMQRCEGKCRIKCGPDNEVD
XP_008456107.1 PREDICTED: uncharacterized protein LOC103496144 isoform X2 [Cucumis melo]2.1e-2084.06Show/hide
Query:  MEK--PAAAAILCFLLLSA-AAVAVSADAADCIDGCFTACVQKDTRLMQRCEGKCRIKCGPDNEVDENL
        MEK   AAAAILC LLLSA A V VSADAADCID CFTACVQKDTR+MQRCEGKCRIKCGPDN+VDEN+
Subjt:  MEK--PAAAAILCFLLLSA-AAVAVSADAADCIDGCFTACVQKDTRLMQRCEGKCRIKCGPDNEVDENL
XP_016901882.1 PREDICTED: uncharacterized protein LOC103496144 isoform X1 [Cucumis melo]1.7e-1773.08Show/hide
Query:  MEK--PAAAAILCFLLLSA-AAVAVSADAADCIDGCFTACVQKD---------TRLMQRCEGKCRIKCGPDNEVDENL
        MEK   AAAAILC LLLSA A V VSADAADCID CFTACVQKD          R+MQRCEGKCRIKCGPDN+VDEN+
Subjt:  MEK--PAAAAILCFLLLSA-AAVAVSADAADCIDGCFTACVQKD---------TRLMQRCEGKCRIKCGPDNEVDENL
TrEMBL top hitse value%identityAlignment
A0A0A0LC00 Uncharacterized protein1.8e-1778.12Show/hide
Query:  AAAAILCFLLLSAAAVAVSADAADCIDGCFTACVQKDTRLMQRCEGKCRIKCGPDNEVDENLTR
        +A AILC LLLS A V VSADAADCIDGCFTACVQKD+R MQRCE KC IKCGPDN+V+EN  R
Subjt:  AAAAILCFLLLSAAAVAVSADAADCIDGCFTACVQKDTRLMQRCEGKCRIKCGPDNEVDENLTR
A0A1S3C2J8 uncharacterized protein LOC103496144 isoform X21.0e-2084.06Show/hide
Query:  MEK--PAAAAILCFLLLSA-AAVAVSADAADCIDGCFTACVQKDTRLMQRCEGKCRIKCGPDNEVDENL
        MEK   AAAAILC LLLSA A V VSADAADCID CFTACVQKDTR+MQRCEGKCRIKCGPDN+VDEN+
Subjt:  MEK--PAAAAILCFLLLSA-AAVAVSADAADCIDGCFTACVQKDTRLMQRCEGKCRIKCGPDNEVDENL
A0A1S4E0W4 uncharacterized protein LOC103496144 isoform X18.2e-1873.08Show/hide
Query:  MEK--PAAAAILCFLLLSA-AAVAVSADAADCIDGCFTACVQKD---------TRLMQRCEGKCRIKCGPDNEVDENL
        MEK   AAAAILC LLLSA A V VSADAADCID CFTACVQKD          R+MQRCEGKCRIKCGPDN+VDEN+
Subjt:  MEK--PAAAAILCFLLLSA-AAVAVSADAADCIDGCFTACVQKD---------TRLMQRCEGKCRIKCGPDNEVDENL
A0A445JGK3 Uncharacterized protein9.7e-1153.85Show/hide
Query:  KPAAAAILCFLLLSAAAVAVSADAADCIDGCFTACVQKDTRLMQRCEGKCRIKCGPDNEVDENLT
        K   AA++ FLL+S    +V  DAADC+DGC TACVQ D+RL  RCE KC I+CGPD+ + E+++
Subjt:  KPAAAAILCFLLLSAAAVAVSADAADCIDGCFTACVQKDTRLMQRCEGKCRIKCGPDNEVDENLT
A0A6A4NXS4 Uncharacterized protein2.5e-1150.75Show/hide
Query:  MEKPAAAAILCFLLLSAAAVAVSADAADCIDGCFTACVQKDTRLMQRCEGKCRIKCGPDNEVDENLT
        M+K   A I+   ++ +    V++DA+DC+D C TACVQ+DTRLMQRC+ KC+IKCGPD++V+E+++
Subjt:  MEKPAAAAILCFLLLSAAAVAVSADAADCIDGCFTACVQKDTRLMQRCEGKCRIKCGPDNEVDENLT
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G25275.1 unknown protein8.4e-0746.43Show/hide
Query:  AAAILCFLLLSAAAVAVSAD--AADCIDGCFTACVQKDTRLMQRCEGKCRIKCGPD
        AA ++   L S+  +   A     DC DGC TACVQ+D R   RC+ KC I+CGPD
Subjt:  AAAILCFLLLSAAAVAVSAD--AADCIDGCFTACVQKDTRLMQRCEGKCRIKCGPD
AT1G25275.2 unknown protein3.2e-0644.64Show/hide
Query:  AAAILCFLLLSAAAVAVSAD--AADCIDGCFTACVQKDTRLMQRCEGKCRIKCGPD
        AA ++   L S+  +   A     DC DGC TACVQ+D     RC+ KC I+CGPD
Subjt:  AAAILCFLLLSAAAVAVSAD--AADCIDGCFTACVQKDTRLMQRCEGKCRIKCGPD
AT1G25275.3 unknown protein4.2e-0645.45Show/hide
Query:  AAAILCFLLLSAAAVAVSAD--AADCIDGCFTACVQKDTRLMQRCEGKCRIKCGP
        AA ++   L S+  +   A     DC DGC TACVQ+D R   RC+ KC I+CGP
Subjt:  AAAILCFLLLSAAAVAVSAD--AADCIDGCFTACVQKDTRLMQRCEGKCRIKCGP

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAAACCCGCGGCGGCGGCGATTTTGTGCTTCTTGCTACTTTCTGCGGCGGCGGTGGCGGTTTCAGCCGACGCTGCCGACTGCATTGACGGCTGTTTCACCGCTTG
TGTCCAGAAAGACACGAGGCTGATGCAGCGTTGTGAGGGCAAGTGTAGAATTAAGTGCGGTCCAGATAACGAAGTTGATGAAAATCTTACTCGTTGA
mRNA sequenceShow/hide mRNA sequence
AAAACTTGCTTTACCAATTTGTATACGGAGAAACAAGCTAATAGAATAGAAGTACTTGTGATCTGAAACAGGGGCGGCCATGGAGAAACCCGCGGCGGCGGCGATTTTGT
GCTTCTTGCTACTTTCTGCGGCGGCGGTGGCGGTTTCAGCCGACGCTGCCGACTGCATTGACGGCTGTTTCACCGCTTGTGTCCAGAAAGACACGAGGCTGATGCAGCGT
TGTGAGGGCAAGTGTAGAATTAAGTGCGGTCCAGATAACGAAGTTGATGAAAATCTTACTCGTTGAGATAGAATAATTAAGGGCATCAATGTTGTGAGAAACTTACCTTC
TTCTTCTGTCGAGGAAAAAACATTTTATGTATGCTTCGAATCAAAGCATTTTTTCTTTCTTATATTATTTTCATTGTTTGTGAAATCTAGATGTTGCATGTTATAAAAAT
GCTTATTTGTGTGGTTATTTATTGTTTTTGTTCCTTTACATTTGAATCAGATTTGACGATATTGCTTCGTATTGAAGGAGATCGAG
Protein sequenceShow/hide protein sequence
MEKPAAAAILCFLLLSAAAVAVSADAADCIDGCFTACVQKDTRLMQRCEGKCRIKCGPDNEVDENLTR