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ClCG05G010875 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG05G010875
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Descriptionprotein AAR2 homolog
Genome locationCG_Chr05:12403250..12418009
RNA-Seq ExpressionClCG05G010875
SyntenyClCG05G010875
Gene Ontology termsGO:0006811 - ion transport (biological process)
GO:0005622 - intracellular (cellular component)
GO:0016020 - membrane (cellular component)
InterPro domainsIPR007946 - A1 cistron-splicing factor, AAR2
IPR033647 - AAR2, N-terminal
IPR038516 - AAR2, N-terminal domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008457081.1 PREDICTED: protein AAR2 homolog isoform X1 [Cucumis melo]8.2e-5072.15Show/hide
Query:  MDPETALELVKQGSTILLLDVPQYTLVGIDTQSFLSDIGRNLYTLFVGLAEKP------LFHSSSRDGREFSPITGFFVDAGPSEVIVRRWDPREERLVK
        MDPETALELVK G TILLLDVPQYTLVGIDTQ F +         F G+   P       + SSSRDGREFSPITGFFVDAGPSEVIVRRWD REERL+K
Subjt:  MDPETALELVKQGSTILLLDVPQYTLVGIDTQSFLSDIGRNLYTLFVGLAEKP------LFHSSSRDGREFSPITGFFVDAGPSEVIVRRWDPREERLVK

Query:  VLEEESEASEVRPDKEERFGEAIRQLEFDRQLGPYNLGQYGEWKRISNYINSTTIKRL
        VLEEE          EERF EAIR+LEFDRQLGPYNLGQYGEWKRISN+INSTTI+RL
Subjt:  VLEEESEASEVRPDKEERFGEAIRQLEFDRQLGPYNLGQYGEWKRISNYINSTTIKRL

XP_038906828.1 protein AAR2 homolog isoform X1 [Benincasa hispida]4.3e-5174.05Show/hide
Query:  MDPETALELVKQGSTILLLDVPQYTLVGIDTQSFLSDIGRNLYTLFVGLAEKP-----LFHSSS-RDGREFSPITGFFVDAGPSEVIVRRWDPREERLVK
        MD ETALELVKQG+TILLLDVPQYTLVGIDTQ F   +G +    F G+   P     L++SSS RDGREFSPITGFF+DAGPSEVIVRRWDP EERLVK
Subjt:  MDPETALELVKQGSTILLLDVPQYTLVGIDTQSFLSDIGRNLYTLFVGLAEKP-----LFHSSS-RDGREFSPITGFFVDAGPSEVIVRRWDPREERLVK

Query:  VLEEESEASEVRPDKEERFGEAIRQLEFDRQLGPYNLGQYGEWKRISNYINSTTIKRL
        VLEEE          EERFGEA+RQLEFDRQLGPYNLGQYGEWKRISN+I+STTIKRL
Subjt:  VLEEESEASEVRPDKEERFGEAIRQLEFDRQLGPYNLGQYGEWKRISNYINSTTIKRL

XP_038906837.1 protein AAR2 homolog isoform X2 [Benincasa hispida]4.3e-5174.05Show/hide
Query:  MDPETALELVKQGSTILLLDVPQYTLVGIDTQSFLSDIGRNLYTLFVGLAEKP-----LFHSSS-RDGREFSPITGFFVDAGPSEVIVRRWDPREERLVK
        MD ETALELVKQG+TILLLDVPQYTLVGIDTQ F   +G +    F G+   P     L++SSS RDGREFSPITGFF+DAGPSEVIVRRWDP EERLVK
Subjt:  MDPETALELVKQGSTILLLDVPQYTLVGIDTQSFLSDIGRNLYTLFVGLAEKP-----LFHSSS-RDGREFSPITGFFVDAGPSEVIVRRWDPREERLVK

Query:  VLEEESEASEVRPDKEERFGEAIRQLEFDRQLGPYNLGQYGEWKRISNYINSTTIKRL
        VLEEE          EERFGEA+RQLEFDRQLGPYNLGQYGEWKRISN+I+STTIKRL
Subjt:  VLEEESEASEVRPDKEERFGEAIRQLEFDRQLGPYNLGQYGEWKRISNYINSTTIKRL

XP_038906864.1 protein AAR2 homolog isoform X4 [Benincasa hispida]4.3e-5174.05Show/hide
Query:  MDPETALELVKQGSTILLLDVPQYTLVGIDTQSFLSDIGRNLYTLFVGLAEKP-----LFHSSS-RDGREFSPITGFFVDAGPSEVIVRRWDPREERLVK
        MD ETALELVKQG+TILLLDVPQYTLVGIDTQ F   +G +    F G+   P     L++SSS RDGREFSPITGFF+DAGPSEVIVRRWDP EERLVK
Subjt:  MDPETALELVKQGSTILLLDVPQYTLVGIDTQSFLSDIGRNLYTLFVGLAEKP-----LFHSSS-RDGREFSPITGFFVDAGPSEVIVRRWDPREERLVK

Query:  VLEEESEASEVRPDKEERFGEAIRQLEFDRQLGPYNLGQYGEWKRISNYINSTTIKRL
        VLEEE          EERFGEA+RQLEFDRQLGPYNLGQYGEWKRISN+I+STTIKRL
Subjt:  VLEEESEASEVRPDKEERFGEAIRQLEFDRQLGPYNLGQYGEWKRISNYINSTTIKRL

XP_038906872.1 protein AAR2 homolog isoform X5 [Benincasa hispida]4.3e-5174.05Show/hide
Query:  MDPETALELVKQGSTILLLDVPQYTLVGIDTQSFLSDIGRNLYTLFVGLAEKP-----LFHSSS-RDGREFSPITGFFVDAGPSEVIVRRWDPREERLVK
        MD ETALELVKQG+TILLLDVPQYTLVGIDTQ F   +G +    F G+   P     L++SSS RDGREFSPITGFF+DAGPSEVIVRRWDP EERLVK
Subjt:  MDPETALELVKQGSTILLLDVPQYTLVGIDTQSFLSDIGRNLYTLFVGLAEKP-----LFHSSS-RDGREFSPITGFFVDAGPSEVIVRRWDPREERLVK

Query:  VLEEESEASEVRPDKEERFGEAIRQLEFDRQLGPYNLGQYGEWKRISNYINSTTIKRL
        VLEEE          EERFGEA+RQLEFDRQLGPYNLGQYGEWKRISN+I+STTIKRL
Subjt:  VLEEESEASEVRPDKEERFGEAIRQLEFDRQLGPYNLGQYGEWKRISNYINSTTIKRL

TrEMBL top hitse value%identityAlignment
A0A0A0M0D1 Uncharacterized protein1.7e-4870.25Show/hide
Query:  MDPETALELVKQGSTILLLDVPQYTLVGIDTQSFLSDIGRNLYTLFVGLAEKP------LFHSSSRDGREFSPITGFFVDAGPSEVIVRRWDPREERLVK
        MDPET+LELVK G T+LLLDVPQYTL+GIDTQ F   +G +    F G+   P       + SSSRDGREFSPITGFFVDAGPSEVIVRRWD REERLVK
Subjt:  MDPETALELVKQGSTILLLDVPQYTLVGIDTQSFLSDIGRNLYTLFVGLAEKP------LFHSSSRDGREFSPITGFFVDAGPSEVIVRRWDPREERLVK

Query:  VLEEESEASEVRPDKEERFGEAIRQLEFDRQLGPYNLGQYGEWKRISNYINSTTIKRL
        VLEEE          E +F EAIR+LEFDRQLGPYNLGQYGEWKR+SN+INSTTIKRL
Subjt:  VLEEESEASEVRPDKEERFGEAIRQLEFDRQLGPYNLGQYGEWKRISNYINSTTIKRL

A0A1S3C5D7 protein AAR2 homolog isoform X14.0e-5072.15Show/hide
Query:  MDPETALELVKQGSTILLLDVPQYTLVGIDTQSFLSDIGRNLYTLFVGLAEKP------LFHSSSRDGREFSPITGFFVDAGPSEVIVRRWDPREERLVK
        MDPETALELVK G TILLLDVPQYTLVGIDTQ F +         F G+   P       + SSSRDGREFSPITGFFVDAGPSEVIVRRWD REERL+K
Subjt:  MDPETALELVKQGSTILLLDVPQYTLVGIDTQSFLSDIGRNLYTLFVGLAEKP------LFHSSSRDGREFSPITGFFVDAGPSEVIVRRWDPREERLVK

Query:  VLEEESEASEVRPDKEERFGEAIRQLEFDRQLGPYNLGQYGEWKRISNYINSTTIKRL
        VLEEE          EERF EAIR+LEFDRQLGPYNLGQYGEWKRISN+INSTTI+RL
Subjt:  VLEEESEASEVRPDKEERFGEAIRQLEFDRQLGPYNLGQYGEWKRISNYINSTTIKRL

A0A1S3C5Z9 protein AAR2 homolog isoform X24.0e-5072.15Show/hide
Query:  MDPETALELVKQGSTILLLDVPQYTLVGIDTQSFLSDIGRNLYTLFVGLAEKP------LFHSSSRDGREFSPITGFFVDAGPSEVIVRRWDPREERLVK
        MDPETALELVK G TILLLDVPQYTLVGIDTQ F +         F G+   P       + SSSRDGREFSPITGFFVDAGPSEVIVRRWD REERL+K
Subjt:  MDPETALELVKQGSTILLLDVPQYTLVGIDTQSFLSDIGRNLYTLFVGLAEKP------LFHSSSRDGREFSPITGFFVDAGPSEVIVRRWDPREERLVK

Query:  VLEEESEASEVRPDKEERFGEAIRQLEFDRQLGPYNLGQYGEWKRISNYINSTTIKRL
        VLEEE          EERF EAIR+LEFDRQLGPYNLGQYGEWKRISN+INSTTI+RL
Subjt:  VLEEESEASEVRPDKEERFGEAIRQLEFDRQLGPYNLGQYGEWKRISNYINSTTIKRL

A0A5A7UZQ3 Protein AAR2-like protein isoform X29.8e-4970.25Show/hide
Query:  MDPETALELVKQGSTILLLDVPQYTLVGIDTQSFLSDIGRNLYTLFVGLAEKP------LFHSSSRDGREFSPITGFFVDAGPSEVIVRRWDPREERLVK
        MDPETALELVK G TILLLDVPQYTLVGIDTQ F +         F G+   P       + SSSRDGREF PITGFFVDAGPSEVIVRRWD REERL+K
Subjt:  MDPETALELVKQGSTILLLDVPQYTLVGIDTQSFLSDIGRNLYTLFVGLAEKP------LFHSSSRDGREFSPITGFFVDAGPSEVIVRRWDPREERLVK

Query:  VLEEESEASEVRPDKEERFGEAIRQLEFDRQLGPYNLGQYGEWKRISNYINSTTIKRL
        VLE+E          EERF EAIR+LEFDRQLGPYNLGQYGEW+RISN+INSTTI+RL
Subjt:  VLEEESEASEVRPDKEERFGEAIRQLEFDRQLGPYNLGQYGEWKRISNYINSTTIKRL

A0A6J1J1Z2 protein AAR2 homolog9.8e-4969.62Show/hide
Query:  MDPETALELVKQGSTILLLDVPQYTLVGIDTQSFLSDIGRNLYTLFVGLAEKP------LFHSSSRDGREFSPITGFFVDAGPSEVIVRRWDPREERLVK
        MDPETAL+LVK G+TILLLDVPQYTL+GIDTQ F   +G +    F G+   P       + SSSR+GREFSPITGFFVDAG SEVIVR+WD REERLVK
Subjt:  MDPETALELVKQGSTILLLDVPQYTLVGIDTQSFLSDIGRNLYTLFVGLAEKP------LFHSSSRDGREFSPITGFFVDAGPSEVIVRRWDPREERLVK

Query:  VLEEESEASEVRPDKEERFGEAIRQLEFDRQLGPYNLGQYGEWKRISNYINSTTIKRL
        V EEE          E+RFGEA+RQLEFDRQLGPYNLGQYGEWKRISN+IN TTIKRL
Subjt:  VLEEESEASEVRPDKEERFGEAIRQLEFDRQLGPYNLGQYGEWKRISNYINSTTIKRL

SwissProt top hitse value%identityAlignment
Q08DJ7 Protein AAR2 homolog4.3e-0930.19Show/hide
Query:  MDPETALELVKQGSTILLLDVPQYTLVGIDTQSFLSDIGRNLYTLFVGLAEKP----LFHSSSRD---GREFSPITGFFVDAGPSEVIVRRWDPREERLV
        MDPE A  L  +G+T+++L++P+ T  GID  S+  ++G      F G+   P      H SS D    RE  P  GFF++     + V RWD   E + 
Subjt:  MDPETALELVKQGSTILLLDVPQYTLVGIDTQSFLSDIGRNLYTLFVGLAEKP----LFHSSSRD---GREFSPITGFFVDAGPSEVIVRRWDPREERLV

Query:  KVLEEESEASEVRPDKEERFGEAIRQLEFDRQLGPYNLGQYGEWKRISNYINSTTIKRL
             E+E   +R + +          E D+ LGPY      +W  ++N+I+  T+++L
Subjt:  KVLEEESEASEVRPDKEERFGEAIRQLEFDRQLGPYNLGQYGEWKRISNYINSTTIKRL

Q4R7D0 Protein AAR2 homolog1.2e-0828.93Show/hide
Query:  MDPETALELVKQGSTILLLDVPQYTLVGIDTQSFLSDIGRNLYTLFVGLAEKP-----LFHSS--SRDGREFSPITGFFVDAGPSEVIVRRWDPREERLV
        MDPE A  L  +G+T+++L++P+ T  GID  S+  ++G      F G+   P     L++SS    + +E  P  GFF+      + V RW    E + 
Subjt:  MDPETALELVKQGSTILLLDVPQYTLVGIDTQSFLSDIGRNLYTLFVGLAEKP-----LFHSS--SRDGREFSPITGFFVDAGPSEVIVRRWDPREERLV

Query:  KVLEEESEASEVRPDKEERFGEAIRQLEFDRQLGPYNLGQYGEWKRISNYINSTTIKRL
             ESE   +R + +          E D+ LGPY      +W  ++N+I+  T+++L
Subjt:  KVLEEESEASEVRPDKEERFGEAIRQLEFDRQLGPYNLGQYGEWKRISNYINSTTIKRL

Q5R5N9 Protein AAR2 homolog4.3e-0929.75Show/hide
Query:  MDPETALELVKQGSTILLLDVPQYTLVGIDTQSFLSDIG---RNLYTLFVGLAEKPLFHSSSRD---GREFSPITGFFVDAGPSEVIVRRWDPREERLVK
        MDPE A  L  +G+T+++L++P+ T  GID  S+  ++G   R + T+  G+      H SS D    +E  P  GFF+      + V RW    E +  
Subjt:  MDPETALELVKQGSTILLLDVPQYTLVGIDTQSFLSDIG---RNLYTLFVGLAEKPLFHSSSRD---GREFSPITGFFVDAGPSEVIVRRWDPREERLVK

Query:  VLEEESEASEVRPDKEERFGEAIRQLEFDRQLGPYNLGQYGEWKRISNYINSTTIKRL
            ESE   +R + +          E D+ LGPY      +W  ++N+I+  T+++L
Subjt:  VLEEESEASEVRPDKEERFGEAIRQLEFDRQLGPYNLGQYGEWKRISNYINSTTIKRL

Q9D2V5 Protein AAR2 homolog3.6e-0828.3Show/hide
Query:  MDPETALELVKQGSTILLLDVPQYTLVGIDTQSFLSDIGRNLYTLFVGLAEKP-----LFHSS--SRDGREFSPITGFFVDAGPSEVIVRRWDPREERLV
        MDPE A +L  +G+T+++L++P+ T  GID  S+  ++G      F G+   P     L++SS    + RE  P  GFF+      + V RW+  +E + 
Subjt:  MDPETALELVKQGSTILLLDVPQYTLVGIDTQSFLSDIGRNLYTLFVGLAEKP-----LFHSS--SRDGREFSPITGFFVDAGPSEVIVRRWDPREERLV

Query:  KVLEEESEASEVRPDKEERFGEAIRQLEFDRQLGPYNLGQYGEWKRISNYINSTTIKRL
             E+E   +R +            + D+ LGPY      +W  ++N+I+  T+++L
Subjt:  KVLEEESEASEVRPDKEERFGEAIRQLEFDRQLGPYNLGQYGEWKRISNYINSTTIKRL

Q9Y312 Protein AAR2 homolog1.2e-0829.56Show/hide
Query:  MDPETALELVKQGSTILLLDVPQYTLVGIDTQSFLSDIGRNLYTLFVGLAEKP----LFHSSSRD---GREFSPITGFFVDAGPSEVIVRRWDPREERLV
        MDPE A  L  +G+T+++L++P+ T  GID  S+  ++G      F G+   P      H SS D    +E  P  GFF+      + V RW    E + 
Subjt:  MDPETALELVKQGSTILLLDVPQYTLVGIDTQSFLSDIGRNLYTLFVGLAEKP----LFHSSSRD---GREFSPITGFFVDAGPSEVIVRRWDPREERLV

Query:  KVLEEESEASEVRPDKEERFGEAIRQLEFDRQLGPYNLGQYGEWKRISNYINSTTIKRL
             ESE   +R + +          E D+ LGPY      +W  ++N+I+  T+++L
Subjt:  KVLEEESEASEVRPDKEERFGEAIRQLEFDRQLGPYNLGQYGEWKRISNYINSTTIKRL

Arabidopsis top hitse value%identityAlignment
AT1G66510.1 AAR2 protein family2.6e-3852.87Show/hide
Query:  MDPETALELVKQGSTILLLDVPQYTLVGIDTQSFLSDIGRNLYTLFVGLAEKP------LFHSSSRDGREFSPITGFFVDAGPSEVIVRRWDPREERLVK
        MD E ALELVK G+T+L LDVPQYTLVGIDTQ F       +   F G+   P       + SS+RDGREFSP  GFFVD  PS+VIVR+W+ ++E L K
Subjt:  MDPETALELVKQGSTILLLDVPQYTLVGIDTQSFLSDIGRNLYTLFVGLAEKP------LFHSSSRDGREFSPITGFFVDAGPSEVIVRRWDPREERLVK

Query:  VLEEESEASEVRPDKEERFGEAIRQLEFDRQLGPYNLGQYGEWKRISNYINSTTIKR
        V EEE          EER+ +A+R LEFD+ LGPYNL QYGEW+ +SNYI    +++
Subjt:  VLEEESEASEVRPDKEERFGEAIRQLEFDRQLGPYNLGQYGEWKRISNYINSTTIKR

AT1G66510.2 AAR2 protein family2.6e-3852.87Show/hide
Query:  MDPETALELVKQGSTILLLDVPQYTLVGIDTQSFLSDIGRNLYTLFVGLAEKP------LFHSSSRDGREFSPITGFFVDAGPSEVIVRRWDPREERLVK
        MD E ALELVK G+T+L LDVPQYTLVGIDTQ F       +   F G+   P       + SS+RDGREFSP  GFFVD  PS+VIVR+W+ ++E L K
Subjt:  MDPETALELVKQGSTILLLDVPQYTLVGIDTQSFLSDIGRNLYTLFVGLAEKP------LFHSSSRDGREFSPITGFFVDAGPSEVIVRRWDPREERLVK

Query:  VLEEESEASEVRPDKEERFGEAIRQLEFDRQLGPYNLGQYGEWKRISNYINSTTIKR
        V EEE          EER+ +A+R LEFD+ LGPYNL QYGEW+ +SNYI    +++
Subjt:  VLEEESEASEVRPDKEERFGEAIRQLEFDRQLGPYNLGQYGEWKRISNYINSTTIKR

AT1G66510.3 AAR2 protein family6.7e-2654.64Show/hide
Query:  FHSSSRDGREFSPITGFFVDAGPSEVIVRRWDPREERLVKVLEEESEASEVRPDKEERFGEAIRQLEFDRQLGPYNLGQYGEWKRISNYINSTTIKR
        + SS+RDGREFSP  GFFVD  PS+VIVR+W+ ++E L KV EEE          EER+ +A+R LEFD+ LGPYNL QYGEW+ +SNYI    +++
Subjt:  FHSSSRDGREFSPITGFFVDAGPSEVIVRRWDPREERLVKVLEEESEASEVRPDKEERFGEAIRQLEFDRQLGPYNLGQYGEWKRISNYINSTTIKR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATCCTGAAACTGCCCTAGAGCTTGTGAAGCAGGGTTCGACGATTCTCCTCCTCGACGTTCCTCAGTACACCCTCGTTGGAATTGATACTCAGTCCTTTTTGTCTGA
TATTGGTCGAAATCTCTATACACTTTTTGTTGGGTTGGCGGAAAAGCCCCTTTTCCATAGTTCTAGCCGAGACGGCAGAGAGTTTTCACCAATTACTGGCTTTTTTGTAG
ATGCCGGTCCCTCTGAGGTTATTGTTCGGAGGTGGGATCCAAGGGAGGAGCGACTGGTTAAAGTATTAGAAGAAGAGTCAGAAGCTTCAGAAGTTAGGCCTGACAAGGAA
GAGCGATTTGGGGAGGCAATTAGACAATTGGAATTTGACAGACAACTTGGTCCGTATAATCTGGGTCAATATGGAGAATGGAAGCGTATATCTAACTACATCAACAGCAC
TACTATTAAACGACTAGGCATGCACCCTTTTCTATTTCAGTGCCTAGTGTGTGTGTAG
mRNA sequenceShow/hide mRNA sequence
CTTTCCACAAGCTTCTGGACTTCAAAAGAAGAACGTTACCGTTCGATTGCCTTCGTTCTATTTCTCCCTTCAGGAGATCGAGAGCGATAAGCAAAGAAGTCACTCAGTTA
GCCGCGAAAAAATTCAGTAAGAACAAGGGGAATTGGAACTCCAATATTCATTTCGCAGTGTTTTCTGAAGTTGAAATGGATCCTGAAACTGCCCTAGAGCTTGTGAAGCA
GGGTTCGACGATTCTCCTCCTCGACGTTCCTCAGTACACCCTCGTTGGAATTGATACTCAGTCCTTTTTGTCTGATATTGGTCGAAATCTCTATACACTTTTTGTTGGGT
TGGCGGAAAAGCCCCTTTTCCATAGTTCTAGCCGAGACGGCAGAGAGTTTTCACCAATTACTGGCTTTTTTGTAGATGCCGGTCCCTCTGAGGTTATTGTTCGGAGGTGG
GATCCAAGGGAGGAGCGACTGGTTAAAGTATTAGAAGAAGAGTCAGAAGCTTCAGAAGTTAGGCCTGACAAGGAAGAGCGATTTGGGGAGGCAATTAGACAATTGGAATT
TGACAGACAACTTGGTCCGTATAATCTGGGTCAATATGGAGAATGGAAGCGTATATCTAACTACATCAACAGCACTACTATTAAACGACTAGGCATGCACCCTTTTCTAT
TTCAGTGCCTAGTGTGTGTGTAG
Protein sequenceShow/hide protein sequence
MDPETALELVKQGSTILLLDVPQYTLVGIDTQSFLSDIGRNLYTLFVGLAEKPLFHSSSRDGREFSPITGFFVDAGPSEVIVRRWDPREERLVKVLEEESEASEVRPDKE
ERFGEAIRQLEFDRQLGPYNLGQYGEWKRISNYINSTTIKRLGMHPFLFQCLVCV