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ClCG05G010940 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG05G010940
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionDehydrogenase, E1 component, Thiamine diphosphate-binding fold protein
Genome locationCG_Chr05:12628431..12629100
RNA-Seq ExpressionClCG05G010940
SyntenyClCG05G010940
Gene Ontology termsGO:0016624 - oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG0538669.1 hypothetical protein BDA96_03G256400 [Sorghum bicolor]1.5e-1061.76Show/hide
Query:  ALDTDGKTTVAGCAMIRRPL--------APTGHSTIAATAKAKNPKVGPTTLHLHGLLWVPHSMQIGT
        AL T G TTVAGCAM+RRPL        AP+GHS   AT  A NP VGPTTLH HGLL VPH    GT
Subjt:  ALDTDGKTTVAGCAMIRRPL--------APTGHSTIAATAKAKNPKVGPTTLHLHGLLWVPHSMQIGT

KAG6507272.1 hypothetical protein ZIOFF_032614 [Zingiber officinale]7.6e-0757.38Show/hide
Query:  MIRRPL--------APTGHSTIAATAKAKNPKVGPTTLHLHGLLWVPHSMQIGTPIPTAIR
        MIRRP         APTGHST AA A A+NP VGPTTLH HGLL  PHS   G  I  + R
Subjt:  MIRRPL--------APTGHSTIAATAKAKNPKVGPTTLHLHGLLWVPHSMQIGTPIPTAIR

PKU71704.1 hypothetical protein MA16_Dca022802 [Dendrobium catenatum]2.7e-0462.5Show/hide
Query:  MIRRPL--------APTGHSTIAATAKAKNPKVGPTTLHLHGLLWVPH
        M+RRP         AP GHST AATA A+ P VGPTTLH HGLL VPH
Subjt:  MIRRPL--------APTGHSTIAATAKAKNPKVGPTTLHLHGLLWVPH

PNT72485.1 hypothetical protein BRADI_2g45053v3 [Brachypodium distachyon]2.4e-0557.41Show/hide
Query:  MIRRPL--------APTGHSTIAATAKAKNPKVGPTTLHLHGLLWVPHSMQIGT
        M+RRPL        AP+GHST   T  A NP VGPTTLH HGLL VPH    GT
Subjt:  MIRRPL--------APTGHSTIAATAKAKNPKVGPTTLHLHGLLWVPHSMQIGT

RCV26405.1 hypothetical protein SETIT_5G242400v2 [Setaria italica]3.2e-0557.41Show/hide
Query:  MIRRPL--------APTGHSTIAATAKAKNPKVGPTTLHLHGLLWVPHSMQIGT
        M+RRPL        AP+GHS   AT KA NP VGP+TLH HGLL VPH    GT
Subjt:  MIRRPL--------APTGHSTIAATAKAKNPKVGPTTLHLHGLLWVPHSMQIGT

TrEMBL top hitse value%identityAlignment
A0A2K2DDW4 Uncharacterized protein1.2e-0557.41Show/hide
Query:  MIRRPL--------APTGHSTIAATAKAKNPKVGPTTLHLHGLLWVPHSMQIGT
        M+RRPL        AP+GHST   T  A NP VGPTTLH HGLL VPH    GT
Subjt:  MIRRPL--------APTGHSTIAATAKAKNPKVGPTTLHLHGLLWVPHSMQIGT

A0A453F4K6 Uncharacterized protein2.2e-0762.96Show/hide
Query:  MIRRPL--------APTGHSTIAATAKAKNPKVGPTTLHLHGLLWVPHSMQIGT
        M+RRPL        AP+GHST  AT  A NP VGPTTLH HGLL VPH  QIGT
Subjt:  MIRRPL--------APTGHSTIAATAKAKNPKVGPTTLHLHGLLWVPHSMQIGT

A0A6M2F144 Uncharacterized protein9.7e-0864Show/hide
Query:  RRPLAPTGHSTIAATAKAKNPKVGPTTLHLHGLLWVPHSMQIGTPIPTAI
        R+  APTGHST  AT  AKNP+VGPTTLH  GLL VPH   IG P P  I
Subjt:  RRPLAPTGHSTIAATAKAKNPKVGPTTLHLHGLLWVPHSMQIGTPIPTAI

A0A6N2KHL3 Uncharacterized protein3.7e-0755.17Show/hide
Query:  RRPLAPTGHSTIAATAKAKNPKVGPTTLHLHGLLWVPHSMQIGTPIPTAIRRSTTEFN
        R+  AP+GHST AATA AKNP VGP+TLH  GLL VPH + IGT   +       +FN
Subjt:  RRPLAPTGHSTIAATAKAKNPKVGPTTLHLHGLLWVPHSMQIGTPIPTAIRRSTTEFN

K3XNZ6 Uncharacterized protein1.5e-0557.41Show/hide
Query:  MIRRPL--------APTGHSTIAATAKAKNPKVGPTTLHLHGLLWVPHSMQIGT
        M+RRPL        AP+GHS   AT KA NP VGP+TLH HGLL VPH    GT
Subjt:  MIRRPL--------APTGHSTIAATAKAKNPKVGPTTLHLHGLLWVPHSMQIGT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTAAGGAAACGCATTAGGTGCGTATTCTCTCAAATAGGAACCGCGTTAGACACCGACGGGAAAACGACGGTGGCCGGATGCGCCATGATACGGCGGCCCTTAGCTCC
GACCGGCCACTCCACCATCGCCGCCACAGCGAAAGCCAAGAACCCCAAGGTCGGTCCCACCACCTTGCACCTGCACGGATTGCTGTGGGTCCCACATTCAATGCAGATCG
GAACGCCGATTCCAACAGCCATTCGCCGGAGCACGACGGAGTTTAACGAAGAAGTGGAAGAGGACAAATTCACCGATTTTAACGCCGAGAGTGAGGAAATGGTTTTCCAG
AATTATTTTATAGAGGGAAGTTTCATGGGAAATTGGATTTTTATAGGACACGTGGCGGTTTTAGCAAGAGTTCATTGGACACGTGTCGTAGAAACGGAGAGTGGTACAGG
TGTCTTGAAGACAGGCCCAACCGATGTTGCTAATGGGCCGAAAGTAGGCCGAATCCGTTTTTGCAAGTTAAAACACAAGCCCATTGTGATCTTGATGGTTCCCATTTTTA
AGTTGGTCCACCTTACGCCCGCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTAAGGAAACGCATTAGGTGCGTATTCTCTCAAATAGGAACCGCGTTAGACACCGACGGGAAAACGACGGTGGCCGGATGCGCCATGATACGGCGGCCCTTAGCTCC
GACCGGCCACTCCACCATCGCCGCCACAGCGAAAGCCAAGAACCCCAAGGTCGGTCCCACCACCTTGCACCTGCACGGATTGCTGTGGGTCCCACATTCAATGCAGATCG
GAACGCCGATTCCAACAGCCATTCGCCGGAGCACGACGGAGTTTAACGAAGAAGTGGAAGAGGACAAATTCACCGATTTTAACGCCGAGAGTGAGGAAATGGTTTTCCAG
AATTATTTTATAGAGGGAAGTTTCATGGGAAATTGGATTTTTATAGGACACGTGGCGGTTTTAGCAAGAGTTCATTGGACACGTGTCGTAGAAACGGAGAGTGGTACAGG
TGTCTTGAAGACAGGCCCAACCGATGTTGCTAATGGGCCGAAAGTAGGCCGAATCCGTTTTTGCAAGTTAAAACACAAGCCCATTGTGATCTTGATGGTTCCCATTTTTA
AGTTGGTCCACCTTACGCCCGCTTAA
Protein sequenceShow/hide protein sequence
MLRKRIRCVFSQIGTALDTDGKTTVAGCAMIRRPLAPTGHSTIAATAKAKNPKVGPTTLHLHGLLWVPHSMQIGTPIPTAIRRSTTEFNEEVEEDKFTDFNAESEEMVFQ
NYFIEGSFMGNWIFIGHVAVLARVHWTRVVETESGTGVLKTGPTDVANGPKVGRIRFCKLKHKPIVILMVPIFKLVHLTPA