; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

ClCG05G010980 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG05G010980
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionUnknown protein
Genome locationCG_Chr05:12696855..12700643
RNA-Seq ExpressionClCG05G010980
SyntenyClCG05G010980
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_038887873.1 ABC transporter C family member 2-like isoform X1 [Benincasa hispida]1.4e-0435.45Show/hide
Query:  SVFQISNSKIQFLRGTRCNFSVSQQKES-ESDNDSIASVSNEDSDCYGEDVNQEEPVQVDKFGEDFNTLFHCDEDLKRKEVGHSCFCPLNQSDIPTHLKS
        S F+IS S + F+RGT  ++    Q    +SD DSIAS S E+ +    +  QE      ++G D   LF   E       G S   P+++ +IP +L S
Subjt:  SVFQISNSKIQFLRGTRCNFSVSQQKES-ESDNDSIASVSNEDSDCYGEDVNQEEPVQVDKFGEDFNTLFHCDEDLKRKEVGHSCFCPLNQSDIPTHLKS

Query:  IIEDCGLPLG
        ++EDC L LG
Subjt:  IIEDCGLPLG
XP_038887874.1 ABC transporter C family member 2-like isoform X2 [Benincasa hispida]1.4e-0435.45Show/hide
Query:  SVFQISNSKIQFLRGTRCNFSVSQQKES-ESDNDSIASVSNEDSDCYGEDVNQEEPVQVDKFGEDFNTLFHCDEDLKRKEVGHSCFCPLNQSDIPTHLKS
        S F+IS S + F+RGT  ++    Q    +SD DSIAS S E+ +    +  QE      ++G D   LF   E       G S   P+++ +IP +L S
Subjt:  SVFQISNSKIQFLRGTRCNFSVSQQKES-ESDNDSIASVSNEDSDCYGEDVNQEEPVQVDKFGEDFNTLFHCDEDLKRKEVGHSCFCPLNQSDIPTHLKS

Query:  IIEDCGLPLG
        ++EDC L LG
Subjt:  IIEDCGLPLG
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTTTTATCTGCTTTGAAAGGAGTCCAGCTGATCAGCAGCACCATGAGGGGGATAGCTTGATCCATGGGCAACGTTTCCGTAGTCTGTCCATAGGGCAACTCCAAAG
TTTTCTGTATAATTCAACTGATGATAAGTCTGAAGAGGACATGAGGGAGGAGTATAATGATTTTTTTAGGGACCATCAGCAATTTGATGCATTCCAAACTTCTTCAATAG
AAGCATTTTTAGAGATGAAGTTGAAGTTGGCCTTTCCCCTTTGCTTGCATAGAAGCTCTTGCTCTATTGAGCGAGCTCTTTATTGTCTTTGGAGGAATCAAGATGATCGG
AGTTCTGAGCAAGTTCCACCGGAAGTGAGTAAGATGACGTCCCCAGATACAATGTTCACACTAAACCCGAAGAAGATGTTAAGTCAAAATGATATGAACGCAAAGAAGGT
TAACGAAGAGACTTTTTCAGCGAGGAGAGAGGAAACGGCTGGCCGCTCGACTCACGTGCCTAATGAATTAATTAGTCGCCACACATTTCCTCGTGAAAAGGCCAACAAGA
TTGAGACCATTGTATTTCCATTGGAAGACGCCCAACGGTTTAGTTGCTCCATAGATGTTGGCATTTCACCTACCTTAGACAACTCATCGCTGATTGGAACAATGAAATCA
TTGGCTTTCATTCGAAAAAGCACATCCGATTCAAAGGAAAGAGATGGTAGTCTGCAGAGCAACAGCCAAGAGATTTTCAGTAAAACTCCAAAGGACGCAGTCAGGAAGAA
GAGATCCATCTTCAAGACAAGTGCAGTTAAGCATTCTGTCTTCCAAATCTCTAATTCTAAGATTCAATTTTTGAGAGGTACCCGGTGCAATTTCTCTGTTTCTCAACAAA
AGGAGTCTGAATCTGATAATGATTCAATAGCAAGTGTTAGCAATGAGGATTCAGATTGCTATGGGGAAGATGTTAATCAAGAAGAGCCAGTGCAAGTAGACAAATTCGGG
GAAGATTTCAATACCCTGTTTCACTGTGATGAAGATTTGAAAAGAAAGGAGGTTGGTCATTCATGTTTCTGCCCATTGAACCAGTCGGATATCCCTACACATTTAAAGTC
CATAATTGAAGATTGTGGACTACCCTTGGGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGACTTTTATCTGCTTTGAAAGGAGTCCAGCTGATCAGCAGCACCATGAGGGGGATAGCTTGATCCATGGGCAACGTTTCCGTAGTCTGTCCATAGGGCAACTCCAAAG
TTTTCTGTATAATTCAACTGATGATAAGTCTGAAGAGGACATGAGGGAGGAGTATAATGATTTTTTTAGGGACCATCAGCAATTTGATGCATTCCAAACTTCTTCAATAG
AAGCATTTTTAGAGATGAAGTTGAAGTTGGCCTTTCCCCTTTGCTTGCATAGAAGCTCTTGCTCTATTGAGCGAGCTCTTTATTGTCTTTGGAGGAATCAAGATGATCGG
AGTTCTGAGCAAGTTCCACCGGAAGTGAGTAAGATGACGTCCCCAGATACAATGTTCACACTAAACCCGAAGAAGATGTTAAGTCAAAATGATATGAACGCAAAGAAGGT
TAACGAAGAGACTTTTTCAGCGAGGAGAGAGGAAACGGCTGGCCGCTCGACTCACGTGCCTAATGAATTAATTAGTCGCCACACATTTCCTCGTGAAAAGGCCAACAAGA
TTGAGACCATTGTATTTCCATTGGAAGACGCCCAACGGTTTAGTTGCTCCATAGATGTTGGCATTTCACCTACCTTAGACAACTCATCGCTGATTGGAACAATGAAATCA
TTGGCTTTCATTCGAAAAAGCACATCCGATTCAAAGGAAAGAGATGGTAGTCTGCAGAGCAACAGCCAAGAGATTTTCAGTAAAACTCCAAAGGACGCAGTCAGGAAGAA
GAGATCCATCTTCAAGACAAGTGCAGTTAAGCATTCTGTCTTCCAAATCTCTAATTCTAAGATTCAATTTTTGAGAGGTACCCGGTGCAATTTCTCTGTTTCTCAACAAA
AGGAGTCTGAATCTGATAATGATTCAATAGCAAGTGTTAGCAATGAGGATTCAGATTGCTATGGGGAAGATGTTAATCAAGAAGAGCCAGTGCAAGTAGACAAATTCGGG
GAAGATTTCAATACCCTGTTTCACTGTGATGAAGATTTGAAAAGAAAGGAGGTTGGTCATTCATGTTTCTGCCCATTGAACCAGTCGGATATCCCTACACATTTAAAGTC
CATAATTGAAGATTGTGGACTACCCTTGGGCTAA
Protein sequenceShow/hide protein sequence
MTFICFERSPADQQHHEGDSLIHGQRFRSLSIGQLQSFLYNSTDDKSEEDMREEYNDFFRDHQQFDAFQTSSIEAFLEMKLKLAFPLCLHRSSCSIERALYCLWRNQDDR
SSEQVPPEVSKMTSPDTMFTLNPKKMLSQNDMNAKKVNEETFSARREETAGRSTHVPNELISRHTFPREKANKIETIVFPLEDAQRFSCSIDVGISPTLDNSSLIGTMKS
LAFIRKSTSDSKERDGSLQSNSQEIFSKTPKDAVRKKRSIFKTSAVKHSVFQISNSKIQFLRGTRCNFSVSQQKESESDNDSIASVSNEDSDCYGEDVNQEEPVQVDKFG
EDFNTLFHCDEDLKRKEVGHSCFCPLNQSDIPTHLKSIIEDCGLPLG