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ClCG05G011030 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG05G011030
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionCalcium-binding EF-hand family protein
Genome locationCG_Chr05:12808359..12810637
RNA-Seq ExpressionClCG05G011030
SyntenyClCG05G011030
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004149790.1 probable calcium-binding protein CML28 [Cucumis sativus]3.8e-3189.16Show/hide
Query:  MGDSSVSSADCERIFKRFDANGDGKISATELGDALNGFGVSAEDAKRMMDAIDKDGDGCISFEEFADFAKDNRALMKDFAKAF
        M DS V+SAD ERIFKRFDANGDGKISATELGDALN FGVS+EDAKRMMDAIDKDGDG ISF+EF DFAKDNRALMKDFAKAF
Subjt:  MGDSSVSSADCERIFKRFDANGDGKISATELGDALNGFGVSAEDAKRMMDAIDKDGDGCISFEEFADFAKDNRALMKDFAKAF

XP_016902062.1 PREDICTED: polcalcin Bra n 2-like [Cucumis melo]1.4e-3391.57Show/hide
Query:  MGDSSVSSADCERIFKRFDANGDGKISATELGDALNGFGVSAEDAKRMMDAIDKDGDGCISFEEFADFAKDNRALMKDFAKAF
        M DS V+SADCERIFKRFDANGDGKISATELGDALNGFGVS+EDAKRMMDAIDKDGDG ISF+EF+DFAKDNRALMKDFAKAF
Subjt:  MGDSSVSSADCERIFKRFDANGDGKISATELGDALNGFGVSAEDAKRMMDAIDKDGDGCISFEEFADFAKDNRALMKDFAKAF

XP_022948513.1 probable calcium-binding protein CML28 [Cucurbita moschata]1.1e-3085.54Show/hide
Query:  MGDSSVSSADCERIFKRFDANGDGKISATELGDALNGFGVSAEDAKRMMDAIDKDGDGCISFEEFADFAKDNRALMKDFAKAF
        M D+ V SA+CERIFKRFDANGDG+ISATELGDALNG GVS+EDAKRMMDAIDKDGDG ISF+EF +FAKDNRALMKDFAKAF
Subjt:  MGDSSVSSADCERIFKRFDANGDGKISATELGDALNGFGVSAEDAKRMMDAIDKDGDGCISFEEFADFAKDNRALMKDFAKAF

XP_022982739.1 polcalcin Syr v 3-like [Cucurbita maxima]2.1e-2980.95Show/hide
Query:  KMGDSSVSSADCERIFKRFDANGDGKISATELGDALNGFGVSAEDAKRMMDAIDKDGDGCISFEEFADFAKDNRALMKDFAKAF
        +M +S +S+A+CERIFKRFDANGDG ISA ELGDALNG GV+AE+AKRMMDAIDKDGDG IS+EEFADF K+NRALMKDFAKAF
Subjt:  KMGDSSVSSADCERIFKRFDANGDGKISATELGDALNGFGVSAEDAKRMMDAIDKDGDGCISFEEFADFAKDNRALMKDFAKAF

XP_038874793.1 probable calcium-binding protein CML28 [Benincasa hispida]5.7e-3593.98Show/hide
Query:  MGDSSVSSADCERIFKRFDANGDGKISATELGDALNGFGVSAEDAKRMMDAIDKDGDGCISFEEFADFAKDNRALMKDFAKAF
        M +S VS+ADCERIFKRFDANGDGKISATELGDALNGFGVSAEDAKRMMDAIDKDGDGCISFEEFA+FAKDNRALMKDFAKAF
Subjt:  MGDSSVSSADCERIFKRFDANGDGKISATELGDALNGFGVSAEDAKRMMDAIDKDGDGCISFEEFADFAKDNRALMKDFAKAF

TrEMBL top hitse value%identityAlignment
A0A0A0L775 Putative calcium-binding protein CML281.9e-3189.16Show/hide
Query:  MGDSSVSSADCERIFKRFDANGDGKISATELGDALNGFGVSAEDAKRMMDAIDKDGDGCISFEEFADFAKDNRALMKDFAKAF
        M DS V+SAD ERIFKRFDANGDGKISATELGDALN FGVS+EDAKRMMDAIDKDGDG ISF+EF DFAKDNRALMKDFAKAF
Subjt:  MGDSSVSSADCERIFKRFDANGDGKISATELGDALNGFGVSAEDAKRMMDAIDKDGDGCISFEEFADFAKDNRALMKDFAKAF

A0A1S4E1G1 polcalcin Bra n 2-like6.8e-3491.57Show/hide
Query:  MGDSSVSSADCERIFKRFDANGDGKISATELGDALNGFGVSAEDAKRMMDAIDKDGDGCISFEEFADFAKDNRALMKDFAKAF
        M DS V+SADCERIFKRFDANGDGKISATELGDALNGFGVS+EDAKRMMDAIDKDGDG ISF+EF+DFAKDNRALMKDFAKAF
Subjt:  MGDSSVSSADCERIFKRFDANGDGKISATELGDALNGFGVSAEDAKRMMDAIDKDGDGCISFEEFADFAKDNRALMKDFAKAF

A0A6J1G9I0 probable calcium-binding protein CML285.4e-3185.54Show/hide
Query:  MGDSSVSSADCERIFKRFDANGDGKISATELGDALNGFGVSAEDAKRMMDAIDKDGDGCISFEEFADFAKDNRALMKDFAKAF
        M D+ V SA+CERIFKRFDANGDG+ISATELGDALNG GVS+EDAKRMMDAIDKDGDG ISF+EF +FAKDNRALMKDFAKAF
Subjt:  MGDSSVSSADCERIFKRFDANGDGKISATELGDALNGFGVSAEDAKRMMDAIDKDGDGCISFEEFADFAKDNRALMKDFAKAF

A0A6J1J5E7 polcalcin Syr v 3-like1.0e-2980.95Show/hide
Query:  KMGDSSVSSADCERIFKRFDANGDGKISATELGDALNGFGVSAEDAKRMMDAIDKDGDGCISFEEFADFAKDNRALMKDFAKAF
        +M +S +S+A+CERIFKRFDANGDG ISA ELGDALNG GV+AE+AKRMMDAIDKDGDG IS+EEFADF K+NRALMKDFAKAF
Subjt:  KMGDSSVSSADCERIFKRFDANGDGKISATELGDALNGFGVSAEDAKRMMDAIDKDGDGCISFEEFADFAKDNRALMKDFAKAF

A0A6J1KB11 probable calcium-binding protein CML285.4e-3185.54Show/hide
Query:  MGDSSVSSADCERIFKRFDANGDGKISATELGDALNGFGVSAEDAKRMMDAIDKDGDGCISFEEFADFAKDNRALMKDFAKAF
        M D+ V SA+CERIFKRFDANGDG+ISATELGDALNG GVS+EDAKRMMDAIDKDGDG ISF+EF +FAKDNRALMKDFAKAF
Subjt:  MGDSSVSSADCERIFKRFDANGDGKISATELGDALNGFGVSAEDAKRMMDAIDKDGDGCISFEEFADFAKDNRALMKDFAKAF

SwissProt top hitse value%identityAlignment
P69198 Polcalcin Bra n 27.1e-2063.75Show/hide
Query:  SVSSADCERIFKRFDANGDGKISATELGDALNGFG-VSAEDAKRMMDAIDKDGDGCISFEEFADFAKDNRALMKDFAKAF
        +   A+ +RIFK+FDANGDGKISA+ELGDAL   G V+ +D KRMM  ID DGDG IS++EF+DFA  NR LMKD AK F
Subjt:  SVSSADCERIFKRFDANGDGKISATELGDALNGFG-VSAEDAKRMMDAIDKDGDGCISFEEFADFAKDNRALMKDFAKAF

P69199 Polcalcin Bra r 27.1e-2063.75Show/hide
Query:  SVSSADCERIFKRFDANGDGKISATELGDALNGFG-VSAEDAKRMMDAIDKDGDGCISFEEFADFAKDNRALMKDFAKAF
        +   A+ +RIFK+FDANGDGKISA+ELGDAL   G V+ +D KRMM  ID DGDG IS++EF+DFA  NR LMKD AK F
Subjt:  SVSSADCERIFKRFDANGDGKISATELGDALNGFG-VSAEDAKRMMDAIDKDGDGCISFEEFADFAKDNRALMKDFAKAF

Q84V36 Polcalcin Che a 34.6e-1960.98Show/hide
Query:  DSSVSSADCERIFKRFDANGDGKISATELGDALNGFG-VSAEDAKRMMDAIDKDGDGCISFEEFADFAKDNRALMKDFAKAF
        D+    AD ERIFKRFD NGDGKIS++ELGDAL   G V+ ++ +RMM  ID DGDG ISF+EF DFA+ NR L+KD +K F
Subjt:  DSSVSSADCERIFKRFDANGDGKISATELGDALNGFG-VSAEDAKRMMDAIDKDGDGCISFEEFADFAKDNRALMKDFAKAF

Q9LF54 Probable calcium-binding protein CML291.7e-1862.5Show/hide
Query:  SVSSADCERIFKRFDANGDGKISATELGDALNGFG-VSAEDAKRMMDAIDKDGDGCISFEEFADFAKDNRALMKDFAKAF
        +   A+ +RIFK+FDANGDGKISA EL +AL   G V+A+D KRMM  ID DGDG IS++EF DFA  NR LMKD AK F
Subjt:  SVSSADCERIFKRFDANGDGKISATELGDALNGFG-VSAEDAKRMMDAIDKDGDGCISFEEFADFAKDNRALMKDFAKAF

Q9SRP7 Probable calcium-binding protein CML287.1e-2065Show/hide
Query:  SVSSADCERIFKRFDANGDGKISATELGDALNGFG-VSAEDAKRMMDAIDKDGDGCISFEEFADFAKDNRALMKDFAKAF
        +   A+ +RIFK+FDANGDGKISA ELGDAL   G V+ ED KRMM  ID DGDG IS++EF DFA  NR LMKD AK F
Subjt:  SVSSADCERIFKRFDANGDGKISATELGDALNGFG-VSAEDAKRMMDAIDKDGDGCISFEEFADFAKDNRALMKDFAKAF

Arabidopsis top hitse value%identityAlignment
AT1G24620.1 EF hand calcium-binding protein family5.7e-0939.24Show/hide
Query:  DCERIFKRFDANGDGKISATELGDALNGFG--VSAEDAKRMMDAIDKDGDGCISFEEFADF---AKDNRALMKDFAKAF
        + E +FK+FD NGDGKIS+ ELG  +   G  V  E+ ++ +  ID+ GDG I+FEEF +      D   ++++   AF
Subjt:  DCERIFKRFDANGDGKISATELGDALNGFG--VSAEDAKRMMDAIDKDGDGCISFEEFADF---AKDNRALMKDFAKAF

AT2G15680.1 Calcium-binding EF-hand family protein6.4e-0844.93Show/hide
Query:  VSSADCERIFKRFDANGDGKISATELGDALNGFG--VSAEDAKRMMDAIDKDGDGCISFEEFADFAKDN
        + S+D    F  FD NGDGKISA E+   L   G   S ED  RM+ A+D DGDG ++ EEF      N
Subjt:  VSSADCERIFKRFDANGDGKISATELGDALNGFG--VSAEDAKRMMDAIDKDGDGCISFEEFADFAKDN

AT2G43290.1 Calcium-binding EF-hand family protein8.3e-0838.71Show/hide
Query:  VSSADCERIFKRFDANGDGKISATELGDALNGFG--VSAEDAKRMMDAIDKDGDGCISFEEF
        +  ++ +R+F+ FD NGDG+I+  EL D+L   G  +  +D  +M+  ID +GDGC+  +EF
Subjt:  VSSADCERIFKRFDANGDGKISATELGDALNGFG--VSAEDAKRMMDAIDKDGDGCISFEEF

AT3G03430.1 Calcium-binding EF-hand family protein5.0e-2165Show/hide
Query:  SVSSADCERIFKRFDANGDGKISATELGDALNGFG-VSAEDAKRMMDAIDKDGDGCISFEEFADFAKDNRALMKDFAKAF
        +   A+ +RIFK+FDANGDGKISA ELGDAL   G V+ ED KRMM  ID DGDG IS++EF DFA  NR LMKD AK F
Subjt:  SVSSADCERIFKRFDANGDGKISATELGDALNGFG-VSAEDAKRMMDAIDKDGDGCISFEEFADFAKDNRALMKDFAKAF

AT5G17480.1 pollen calcium-binding protein 11.2e-1962.5Show/hide
Query:  SVSSADCERIFKRFDANGDGKISATELGDALNGFG-VSAEDAKRMMDAIDKDGDGCISFEEFADFAKDNRALMKDFAKAF
        +   A+ +RIFK+FDANGDGKISA EL +AL   G V+A+D KRMM  ID DGDG IS++EF DFA  NR LMKD AK F
Subjt:  SVSSADCERIFKRFDANGDGKISATELGDALNGFG-VSAEDAKRMMDAIDKDGDGCISFEEFADFAKDNRALMKDFAKAF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGACAACCCACCAGCAGCGGCGTTCAGGTGATGGAGGCAGACAACGTGCGACATCGGTGGTGGCGAGCAAGTGTGCGACGGCGGCAACTACGAGCAGGTTTGCAAC
GGCGGCAGCGACGAACAGAAAAATGGGAGACAGTAGCGTAAGCTCAGCCGATTGCGAGAGGATTTTCAAGCGATTCGACGCTAACGGCGACGGGAAGATCTCGGCGACGG
AGCTGGGCGATGCTTTGAACGGATTCGGAGTTAGTGCTGAGGACGCAAAGAGGATGATGGACGCCATTGATAAAGATGGAGATGGCTGCATTTCCTTCGAAGAGTTCGCG
GATTTTGCTAAGGATAATCGCGCTTTGATGAAGGATTTTGCCAAGGCGTTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTGACAACCCACCAGCAGCGGCGTTCAGGTGATGGAGGCAGACAACGTGCGACATCGGTGGTGGCGAGCAAGTGTGCGACGGCGGCAACTACGAGCAGGTTTGCAAC
GGCGGCAGCGACGAACAGAAAAATGGGAGACAGTAGCGTAAGCTCAGCCGATTGCGAGAGGATTTTCAAGCGATTCGACGCTAACGGCGACGGGAAGATCTCGGCGACGG
AGCTGGGCGATGCTTTGAACGGATTCGGAGTTAGTGCTGAGGACGCAAAGAGGATGATGGACGCCATTGATAAAGATGGAGATGGCTGCATTTCCTTCGAAGAGTTCGCG
GATTTTGCTAAGGATAATCGCGCTTTGATGAAGGATTTTGCCAAGGCGTTTTAG
Protein sequenceShow/hide protein sequence
MVTTHQQRRSGDGGRQRATSVVASKCATAATTSRFATAAATNRKMGDSSVSSADCERIFKRFDANGDGKISATELGDALNGFGVSAEDAKRMMDAIDKDGDGCISFEEFA
DFAKDNRALMKDFAKAF