; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

ClCG05G011490 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG05G011490
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionHMG-Y-related protein A-like
Genome locationCG_Chr05:13694399..13696256
RNA-Seq ExpressionClCG05G011490
SyntenyClCG05G011490
Gene Ontology termsGO:0006334 - nucleosome assembly (biological process)
GO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0016584 - nucleosome positioning (biological process)
GO:0030261 - chromosome condensation (biological process)
GO:0045910 - negative regulation of DNA recombination (biological process)
GO:0000786 - nucleosome (cellular component)
GO:0005730 - nucleolus (cellular component)
GO:0003690 - double-stranded DNA binding (molecular function)
GO:0008168 - methyltransferase activity (molecular function)
GO:0031492 - nucleosomal DNA binding (molecular function)
InterPro domainsIPR000116 - High mobility group protein HMGA
IPR005818 - Linker histone H1/H5, domain H15
IPR017956 - AT hook, DNA-binding motif
IPR031059 - High mobility group protein HMGA, plant
IPR036388 - Winged helix-like DNA-binding domain superfamily
IPR036390 - Winged helix DNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004145857.1 HMG-Y-related protein A isoform X2 [Cucumis sativus]8.5e-8592.78Show/hide
Query:  MATEEVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNYMKRDPTAPPRRGRGRPPKPKGPLP
        MAT+EVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASG+LVFWKNNYMKRDPTAPPRRGRGRPPK K PLP
Subjt:  MATEEVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNYMKRDPTAPPRRGRGRPPKPKGPLP

Query:  PNSALSPPKPRGRPPKDPNAPPKPPTPVQMKVSSGTGKPRGRPRKFPQPATTPAPPAPSGRPRGRPPKVKAPLTEVSVQQ
         +S +S PKPRGRPPKDPNAPPKPP PVQMKVSSGTGKPRGRPRKFPQ A+TPAPPAPSGRPRGRPPKVKA LTEVSVQQ
Subjt:  PNSALSPPKPRGRPPKDPNAPPKPPTPVQMKVSSGTGKPRGRPRKFPQPATTPAPPAPSGRPRGRPPKVKAPLTEVSVQQ

XP_008456999.1 PREDICTED: HMG-Y-related protein A-like [Cucumis melo]1.2e-8694.44Show/hide
Query:  MATEEVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNYMKRDPTAPPRRGRGRPPKPKGPLP
        MAT+EVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASG+LVFWKNNYMKRDPTAPPRRGRGRPPK K PLP
Subjt:  MATEEVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNYMKRDPTAPPRRGRGRPPKPKGPLP

Query:  PNSALSPPKPRGRPPKDPNAPPKPPTPVQMKVSSGTGKPRGRPRKFPQPATTPAPPAPSGRPRGRPPKVKAPLTEVSVQQ
         +SA+SPPKPRGRPPKDPNAPPKPP PVQMKVSSGTGKPRGRPRKFPQ ATTPAPPAPSGRPRGRPPKVKA LTEVSVQQ
Subjt:  PNSALSPPKPRGRPPKDPNAPPKPPTPVQMKVSSGTGKPRGRPRKFPQPATTPAPPAPSGRPRGRPPKVKAPLTEVSVQQ

XP_022935331.1 HMG-Y-related protein A-like [Cucurbita moschata]3.8e-8592.9Show/hide
Query:  MATEEVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNYMKRDPTAPPRRGRGRPPKPKGPLP
        MA EEVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNYMKRDPTAPPRRGRGRPPK K PLP
Subjt:  MATEEVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNYMKRDPTAPPRRGRGRPPKPKGPLP

Query:  PNSALSPPKPRGRPPKDPNA---PPKPPTPVQMKVSSGTGKPRGRPRKFPQPATTPAPPAPSGRPRGRPPKVKAPLTEVSVQQ
        P S LSPPKPRGRPPKDPNA   PPKPP PVQMKVSSGTGKPRGRPRKFP+PAT PAPP PSGRPRGRPPKVK PLTEVSVQQ
Subjt:  PNSALSPPKPRGRPPKDPNA---PPKPPTPVQMKVSSGTGKPRGRPRKFPQPATTPAPPAPSGRPRGRPPKVKAPLTEVSVQQ

XP_031739266.1 HMG-Y-related protein A isoform X1 [Cucumis sativus]1.2e-8185.2Show/hide
Query:  MATEEVNKPPSLPPYPE----------------MIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNYMKRDPTAP
        MAT+EVNKPPSLPPYPE                MIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASG+LVFWKNNYMKRDPTAP
Subjt:  MATEEVNKPPSLPPYPE----------------MIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNYMKRDPTAP

Query:  PRRGRGRPPKPKGPLPPNSALSPPKPRGRPPKDPNAPPKPPTPVQMKVSSGTGKPRGRPRKFPQPATTPAPPAPSGRPRGRPPKVKAPLTEVSVQQ
        PRRGRGRPPK K PLP +S +S PKPRGRPPKDPNAPPKPP PVQMKVSSGTGKPRGRPRKFPQ A+TPAPPAPSGRPRGRPPKVKA LTEVSVQQ
Subjt:  PRRGRGRPPKPKGPLPPNSALSPPKPRGRPPKDPNAPPKPPTPVQMKVSSGTGKPRGRPRKFPQPATTPAPPAPSGRPRGRPPKVKAPLTEVSVQQ

XP_038878302.1 HMG-Y-related protein A-like [Benincasa hispida]2.9e-8592.78Show/hide
Query:  MATEEVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNYMKRDPTAPPRRGRGRPPKPKGPLP
        MATEEVNKPPSLPPYPEMIFRAIEALNS+NGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNYMKRDPTAPPRRGRGRPPKPKGPLP
Subjt:  MATEEVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNYMKRDPTAPPRRGRGRPPKPKGPLP

Query:  PNSALSPPKPRGRPPKDPNAPPKPPTPVQMKVSSGTGKPRGRPRKFPQPATTPAPPAPSGRPRGRPPKVKAPLTEVSVQQ
        P+S LSPPKPRGRPPKDPNAPPKPP PVQMKVSSGTGK RGRPRKFP   T P+PP PSGRPRGRPPKVK  LTEVSVQQ
Subjt:  PNSALSPPKPRGRPPKDPNAPPKPPTPVQMKVSSGTGKPRGRPRKFPQPATTPAPPAPSGRPRGRPPKVKAPLTEVSVQQ

TrEMBL top hitse value%identityAlignment
A0A0A0LCH9 H15 domain-containing protein4.1e-8592.78Show/hide
Query:  MATEEVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNYMKRDPTAPPRRGRGRPPKPKGPLP
        MAT+EVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASG+LVFWKNNYMKRDPTAPPRRGRGRPPK K PLP
Subjt:  MATEEVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNYMKRDPTAPPRRGRGRPPKPKGPLP

Query:  PNSALSPPKPRGRPPKDPNAPPKPPTPVQMKVSSGTGKPRGRPRKFPQPATTPAPPAPSGRPRGRPPKVKAPLTEVSVQQ
         +S +S PKPRGRPPKDPNAPPKPP PVQMKVSSGTGKPRGRPRKFPQ A+TPAPPAPSGRPRGRPPKVKA LTEVSVQQ
Subjt:  PNSALSPPKPRGRPPKDPNAPPKPPTPVQMKVSSGTGKPRGRPRKFPQPATTPAPPAPSGRPRGRPPKVKAPLTEVSVQQ

A0A1S3C432 HMG-Y-related protein A-like5.8e-8794.44Show/hide
Query:  MATEEVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNYMKRDPTAPPRRGRGRPPKPKGPLP
        MAT+EVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASG+LVFWKNNYMKRDPTAPPRRGRGRPPK K PLP
Subjt:  MATEEVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNYMKRDPTAPPRRGRGRPPKPKGPLP

Query:  PNSALSPPKPRGRPPKDPNAPPKPPTPVQMKVSSGTGKPRGRPRKFPQPATTPAPPAPSGRPRGRPPKVKAPLTEVSVQQ
         +SA+SPPKPRGRPPKDPNAPPKPP PVQMKVSSGTGKPRGRPRKFPQ ATTPAPPAPSGRPRGRPPKVKA LTEVSVQQ
Subjt:  PNSALSPPKPRGRPPKDPNAPPKPPTPVQMKVSSGTGKPRGRPRKFPQPATTPAPPAPSGRPRGRPPKVKAPLTEVSVQQ

A0A5D3DJY3 HMG-Y-related protein A-like5.8e-8794.44Show/hide
Query:  MATEEVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNYMKRDPTAPPRRGRGRPPKPKGPLP
        MAT+EVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASG+LVFWKNNYMKRDPTAPPRRGRGRPPK K PLP
Subjt:  MATEEVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNYMKRDPTAPPRRGRGRPPKPKGPLP

Query:  PNSALSPPKPRGRPPKDPNAPPKPPTPVQMKVSSGTGKPRGRPRKFPQPATTPAPPAPSGRPRGRPPKVKAPLTEVSVQQ
         +SA+SPPKPRGRPPKDPNAPPKPP PVQMKVSSGTGKPRGRPRKFPQ ATTPAPPAPSGRPRGRPPKVKA LTEVSVQQ
Subjt:  PNSALSPPKPRGRPPKDPNAPPKPPTPVQMKVSSGTGKPRGRPRKFPQPATTPAPPAPSGRPRGRPPKVKAPLTEVSVQQ

A0A6J1F494 HMG-Y-related protein A-like1.9e-8592.9Show/hide
Query:  MATEEVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNYMKRDPTAPPRRGRGRPPKPKGPLP
        MA EEVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNYMKRDPTAPPRRGRGRPPK K PLP
Subjt:  MATEEVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNYMKRDPTAPPRRGRGRPPKPKGPLP

Query:  PNSALSPPKPRGRPPKDPNA---PPKPPTPVQMKVSSGTGKPRGRPRKFPQPATTPAPPAPSGRPRGRPPKVKAPLTEVSVQQ
        P S LSPPKPRGRPPKDPNA   PPKPP PVQMKVSSGTGKPRGRPRKFP+PAT PAPP PSGRPRGRPPKVK PLTEVSVQQ
Subjt:  PNSALSPPKPRGRPPKDPNA---PPKPPTPVQMKVSSGTGKPRGRPRKFPQPATTPAPPAPSGRPRGRPPKVKAPLTEVSVQQ

A0A6J1J6G8 HMG-Y-related protein A-like1.9e-8592.9Show/hide
Query:  MATEEVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNYMKRDPTAPPRRGRGRPPKPKGPLP
        MA EEVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNYMKRDPTAPPRRGRGRPPK K PLP
Subjt:  MATEEVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNYMKRDPTAPPRRGRGRPPKPKGPLP

Query:  PNSALSPPKPRGRPPKDPNA---PPKPPTPVQMKVSSGTGKPRGRPRKFPQPATTPAPPAPSGRPRGRPPKVKAPLTEVSVQQ
        P S LSPPKPRGRPPKDPNA   PPKPP PVQMKVSSGTGKPRGRPRKFP+PAT PAPP PSGRPRGRPPKVK PLTEVSVQQ
Subjt:  PNSALSPPKPRGRPPKDPNA---PPKPPTPVQMKVSSGTGKPRGRPRKFPQPATTPAPPAPSGRPRGRPPKVKAPLTEVSVQQ

SwissProt top hitse value%identityAlignment
Q00423 HMG-Y-related protein A1.3e-5668.33Show/hide
Query:  MATEEVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNYMKRDPTAPPRRGRGRPPKPKGPLP
        MATEEVNKP SLPPYPEMI + +EALN  NGSNKS ISKYIE+TYG LP   +++L  HLN MK SGEL F +NNYMK DP APP+RGRGRPPKPK PLP
Subjt:  MATEEVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNYMKRDPTAPPRRGRGRPPKPKGPLP

Query:  PNSALSPPKPRGRPPKDPNAPPKPPTPVQMKVSSGTGKPRGRPRKFPQPATTPAPPA-PSGRPRGRPPKVKAPLTEVSVQ
        P + +SPP+PRGRPPKDPNAPPK P   + K + G+G+PRGRP+K P+     AP A  SGRPRGRPPKVK  LTEVSV+
Subjt:  PNSALSPPKPRGRPPKDPNAPPKPPTPVQMKVSSGTGKPRGRPRKFPQPATTPAPPA-PSGRPRGRPPKVKAPLTEVSVQ

Q10370 HMG-Y-related protein B (Fragment)1.7e-4365.38Show/hide
Query:  ALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNYMKRDPTAPPRRGRGRPPKPKGPLPPNSALSPPKPRGRPPKDPNAPPKP
        ALN  +GSNKS ISKYIE+TYG LP    ++L  HLN MK SGEL F +NNYMK DP APP+RGRGRPPKPK PLPP + +SPP+PRGRPPKDPNAPPK 
Subjt:  ALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNYMKRDPTAPPRRGRGRPPKPKGPLPPNSALSPPKPRGRPPKDPNAPPKP

Query:  PTPVQMKVSSGTGKPRGRPRKFPQPATTPAPPAPS-GRPRGRPPKVKAPLTEVSVQ
        P   + K +  TG+PRGRP+K  +    P+P A S GRPRGRPPKVK  LTEVSV+
Subjt:  PTPVQMKVSSGTGKPRGRPRKFPQPATTPAPPAPS-GRPRGRPPKVKAPLTEVSVQ

Q43386 HMG-Y-related protein A9.3e-3452.25Show/hide
Query:  SLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNYMKRDPTAPPRRGRGRPPKPKGPLPPNSALS----
        SLPPYP+MI  AIE+LN  NG NK+TI+K+IEST   LP  H +LL++HLN MK +G+L+  KNNYMK DP APP+RGRGRPPK K     ++A +    
Subjt:  SLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNYMKRDPTAPPRRGRGRPPKPKGPLPPNSALS----

Query:  -------PPKPRGRPPKDPNAPPKPPTPVQMKVSSGTGKPRGRPRKFPQ-PATTPAPPAPSG------RPRGRPPKVK
               PP+ RGRPPK    P  P  P Q KV +G+G+PRGRP K P+  + T A P P+       R RGRPPKVK
Subjt:  -------PPKPRGRPPKDPNAPPKPPTPVQMKVSSGTGKPRGRPRKFPQ-PATTPAPPAPSG------RPRGRPPKVK

Q9FYS5 HMG-Y-related protein A2.1e-3353.19Show/hide
Query:  MATEEVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNYMKRD-PTAPPRRGRGRPPK---PK
        MAT+E  KP  +PPYPEMI  AIE L+  +GSNKS ISKYIE  YG+LP  H+SLLT HL  MK SGELVF KNNY +   P APP+RGRGRPPK   P 
Subjt:  MATEEVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNYMKRD-PTAPPRRGRGRPPK---PK

Query:  GPLP-PNSALSPPKPRGRPPKDPNAPPKPPTPVQMK-VSSGTGKPRGRPRK--------FPQPATTPAP----PAPSGRPRGRPPKVK
         P P P S  S  + RGRPPK      K P    +K  ++G  KPRGRP K         P P+  PAP      P  R RGRPPKV+
Subjt:  GPLP-PNSALSPPKPRGRPPKDPNAPPKPPTPVQMK-VSSGTGKPRGRPRK--------FPQPATTPAP----PAPSGRPRGRPPKVK

Arabidopsis top hitse value%identityAlignment
AT1G14900.1 high mobility group A6.6e-3552.25Show/hide
Query:  SLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNYMKRDPTAPPRRGRGRPPKPKGPLPPNSALS----
        SLPPYP+MI  AIE+LN  NG NK+TI+K+IEST   LP  H +LL++HLN MK +G+L+  KNNYMK DP APP+RGRGRPPK K     ++A +    
Subjt:  SLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNYMKRDPTAPPRRGRGRPPKPKGPLPPNSALS----

Query:  -------PPKPRGRPPKDPNAPPKPPTPVQMKVSSGTGKPRGRPRKFPQ-PATTPAPPAPSG------RPRGRPPKVK
               PP+ RGRPPK    P  P  P Q KV +G+G+PRGRP K P+  + T A P P+       R RGRPPKVK
Subjt:  -------PPKPRGRPPKDPNAPPKPPTPVQMKVSSGTGKPRGRPRKFPQ-PATTPAPPAPSG------RPRGRPPKVK

AT1G48620.1 high mobility group A51.6e-1234.84Show/hide
Query:  TEEVNKPPSL--PPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNY-MKRDPTAPP--------------
        T  V   PS+  PPY +MI  AI ALN  +GS+K  IS+YIE  Y  +PT H +LLTHHL  +K SG LV  K +Y +   P  PP              
Subjt:  TEEVNKPPSL--PPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNY-MKRDPTAPP--------------

Query:  ----------------------RRGRGRPPKPKGPLPPNSALSPPK--------PRGRPPKDPNAPPKPPTPVQMKVSSGTGKPRGRPRK-FPQPATTPA
                              +RGRGRPPK K  +     L+  K        P  RP +    PP+ P   Q  V     +P GRPRK    P   PA
Subjt:  ----------------------RRGRGRPPKPKGPLPPNSALSPPK--------PRGRPPKDPNAPPKPPTPVQMKVSSGTGKPRGRPRK-FPQPATTPA

Query:  PPAPSG----RPRGRPPKVKA
             G    + RGRPP  +A
Subjt:  PPAPSG----RPRGRPPKVKA

AT3G18035.1 winged-helix DNA-binding transcription factor family protein5.1e-1133.65Show/hide
Query:  PPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNY---------------------------------MKR
        PPY EMI  AI ALN  +GS+K  IS+YIE  Y  L + H++LLTHHL  +K SG L   K +Y                                    
Subjt:  PPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNY---------------------------------MKR

Query:  DPTA------PPRRGRGRPPKPKGPLPPNSALSPP-----KPRGRP---PKDPNAPPKPPTPVQMKVSSGTGKPRGRPRKFPQPATTPAPPAPSG--RPR
        DP A      P +RGRGRPPKPK    P      P     +  G+P    +   +P   PTPV      G G+PR      P  A        +G  + R
Subjt:  DPTA------PPRRGRGRPPKPKGPLPPNSALSPP-----KPRGRP---PKDPNAPPKPPTPVQMKVSSGTGKPRGRPRKFPQPATTPAPPAPSG--RPR

Query:  GRPPKVKA
        GRPP  +A
Subjt:  GRPPKVKA

AT5G08780.1 winged-helix DNA-binding transcription factor family protein1.8e-0840Show/hide
Query:  VNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNN
        +++ P  P Y  MIF AI  LN + G+++  IS++I+S Y NLP  H++LL+HHL  +    E++   NN
Subjt:  VNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGACTGAAGAGGTTAACAAACCTCCATCACTCCCCCCATACCCTGAGATGATATTTAGGGCTATTGAAGCATTGAATAGTGATAATGGCTCAAACAAGTCCACAAT
ATCAAAGTACATTGAATCAACATATGGGAATTTGCCCACTGGGCACTCATCTTTGCTCACACACCATTTGAACATGATGAAAGCCAGTGGGGAACTTGTGTTTTGGAAGA
ACAACTACATGAAGAGGGATCCCACAGCACCTCCCCGGCGAGGACGGGGCAGGCCTCCAAAACCGAAGGGTCCTCTGCCACCAAATTCTGCTTTATCCCCGCCAAAGCCG
AGAGGCCGCCCGCCGAAGGACCCCAATGCACCTCCAAAACCACCAACGCCAGTGCAGATGAAGGTATCTTCTGGGACTGGAAAACCAAGAGGACGGCCAAGGAAATTCCC
TCAGCCAGCAACCACGCCAGCTCCGCCAGCACCAAGCGGGAGGCCCAGAGGTCGACCTCCTAAGGTGAAGGCTCCATTGACTGAAGTTAGCGTTCAACAATAG
mRNA sequenceShow/hide mRNA sequence
TTTTTTTTTTTTGAACAGCAGTAGTAGGTTCCTCTCTCTATCTCTAGCTGCTTTCTGGGTGACTCTTCTCTTCTCTATAGGCTTCAGGAAAATAATAGCTTTCTTTTTCA
ATTTTCAATGGCGACTGAAGAGGTTAACAAACCTCCATCACTCCCCCCATACCCTGAGATGATATTTAGGGCTATTGAAGCATTGAATAGTGATAATGGCTCAAACAAGT
CCACAATATCAAAGTACATTGAATCAACATATGGGAATTTGCCCACTGGGCACTCATCTTTGCTCACACACCATTTGAACATGATGAAAGCCAGTGGGGAACTTGTGTTT
TGGAAGAACAACTACATGAAGAGGGATCCCACAGCACCTCCCCGGCGAGGACGGGGCAGGCCTCCAAAACCGAAGGGTCCTCTGCCACCAAATTCTGCTTTATCCCCGCC
AAAGCCGAGAGGCCGCCCGCCGAAGGACCCCAATGCACCTCCAAAACCACCAACGCCAGTGCAGATGAAGGTATCTTCTGGGACTGGAAAACCAAGAGGACGGCCAAGGA
AATTCCCTCAGCCAGCAACCACGCCAGCTCCGCCAGCACCAAGCGGGAGGCCCAGAGGTCGACCTCCTAAGGTGAAGGCTCCATTGACTGAAGTTAGCGTTCAACAATAG
ATTGTTGCAGTGCAGTGTTAATTGGTAGTGCCTTGACTCTCTCTCTTATCTCTCTCTGTTGCTGTGTGGGCAGTTTGTAGTTGTAGTGCTAGTTTTAGTTTGATGTGGAT
GTGGGTGTAATTCATGTAAAATGTGGTGTAGTGGTTTGTGAGGCTCTGTTGCTTTCTAATTTACAAAGTGAACATTGACCTGTGCTAATCATAATTTCTTCAGTGTTTCG
A
Protein sequenceShow/hide protein sequence
MATEEVNKPPSLPPYPEMIFRAIEALNSDNGSNKSTISKYIESTYGNLPTGHSSLLTHHLNMMKASGELVFWKNNYMKRDPTAPPRRGRGRPPKPKGPLPPNSALSPPKP
RGRPPKDPNAPPKPPTPVQMKVSSGTGKPRGRPRKFPQPATTPAPPAPSGRPRGRPPKVKAPLTEVSVQQ