; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

ClCG05G012500 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG05G012500
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionUnknown protein
Genome locationCG_Chr05:16051172..16051502
RNA-Seq ExpressionClCG05G012500
SyntenyClCG05G012500
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN57680.1 hypothetical protein Csa_010019 [Cucumis sativus]5.9e-1175.47Show/hide
Query:  RQLPPAPTTPETNHCRSSLHRLCPKTPPNIHHVCKLSDLNRTLNLKLASLSVF
        RQLPPA     TNH RSSLH+LCPKTPP IH+V  L DLN+TLNLKLASLSVF
Subjt:  RQLPPAPTTPETNHCRSSLHRLCPKTPPNIHHVCKLSDLNRTLNLKLASLSVF
TrEMBL top hitse value%identityAlignment
A0A0A0L6S4 Uncharacterized protein2.8e-1175.47Show/hide
Query:  RQLPPAPTTPETNHCRSSLHRLCPKTPPNIHHVCKLSDLNRTLNLKLASLSVF
        RQLPPA     TNH RSSLH+LCPKTPP IH+V  L DLN+TLNLKLASLSVF
Subjt:  RQLPPAPTTPETNHCRSSLHRLCPKTPPNIHHVCKLSDLNRTLNLKLASLSVF
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAATTGATCTCTCTCTTACTAAAGACGGGAGAAGAATCCGCCTCCTCTTCTTCTTCAATCTACTCCGGCAGCTTCCTCCGGCTCCGACGACGCCTGAAACAAACCA
CTGCCGATCCTCTCTTCACCGACTATGCCCTAAAACTCCACCCAATATCCACCATGTTTGTAAGCTTTCGGATCTGAATCGGACCCTAAATCTGAAACTGGCTTCTCTCT
CTGTATTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAAATTGATCTCTCTCTTACTAAAGACGGGAGAAGAATCCGCCTCCTCTTCTTCTTCAATCTACTCCGGCAGCTTCCTCCGGCTCCGACGACGCCTGAAACAAACCA
CTGCCGATCCTCTCTTCACCGACTATGCCCTAAAACTCCACCCAATATCCACCATGTTTGTAAGCTTTCGGATCTGAATCGGACCCTAAATCTGAAACTGGCTTCTCTCT
CTGTATTCTGA
Protein sequenceShow/hide protein sequence
MKIDLSLTKDGRRIRLLFFFNLLRQLPPAPTTPETNHCRSSLHRLCPKTPPNIHHVCKLSDLNRTLNLKLASLSVF