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ClCG05G012600 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG05G012600
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionUnknown protein
Genome locationCG_Chr05:16932904..16933343
RNA-Seq ExpressionClCG05G012600
SyntenyClCG05G012600
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064635.1 hypothetical protein E6C27_scaffold255G003590 [Cucumis melo var. makuwa]4.5e-0834.39Show/hide
Query:  MKMMQTKRRYITCH----------------------------SSNPKVTQFKTPPTK---------------ISVLSPTRAARVEMLKARFGGTILKAQQ
        M+MMQ KRRY+                               +SN ++ +F++P +K               I VLSP +AARVEMLK +FG TILKAQQ
Subjt:  MKMMQTKRRYITCH----------------------------SSNPKVTQFKTPPTK---------------ISVLSPTRAARVEMLKARFGGTILKAQQ

Query:  ----------------TTKTC--------AKEALNKIKLTFDFNENLDAMREFEKFI
                          K C        ++E+L+KIK  FDFNENLD+MR+FE+ +
Subjt:  ----------------TTKTC--------AKEALNKIKLTFDFNENLDAMREFEKFI

KAE8647905.1 hypothetical protein Csa_000421, partial [Cucumis sativus]8.8e-1239.24Show/hide
Query:  MKMMQTKRRYITCHSSNPKVTQFKT----------------------------------------PPTKISVLSPTRAARVEMLKARFGGTILKAQQ---
        MKMMQTKRR++  H   PKV   K                                         P T I VLSP RAARVE+LKA+FG TILKAQQ   
Subjt:  MKMMQTKRRYITCHSSNPKVTQFKT----------------------------------------PPTKISVLSPTRAARVEMLKARFGGTILKAQQ---

Query:  ----------------TTKTC---------AKEALNKIKLTFDFNENLDAMREFEKFI
                        T KTC         ++EAL+KI   FDFNENLD+MREFEK +
Subjt:  ----------------TTKTC---------AKEALNKIKLTFDFNENLDAMREFEKFI

KAE8647906.1 hypothetical protein Csa_000254, partial [Cucumis sativus]1.3e-0748.39Show/hide
Query:  PPTKISVLSPTRAARVEMLKARFGGTILKAQQ-------------------TTKTC---------AKEALNK-IKLTFDFNENLDAMREFEKF
        P T I VLSP RAARVE+LKA+FG TI KAQQ                   T KTC         ++EAL+K I   FDFNENLD+M+EFE++
Subjt:  PPTKISVLSPTRAARVEMLKARFGGTILKAQQ-------------------TTKTC---------AKEALNK-IKLTFDFNENLDAMREFEKF

KGN61401.2 hypothetical protein Csa_006690, partial [Cucumis sativus]3.3e-1138.61Show/hide
Query:  MKMMQTKRRYITCHSSNPKVTQFKT----------------------------------------PPTKISVLSPTRAARVEMLKARFGGTILKAQQ---
        MKMMQTKRRY+  H   PKV   K                                         P T I VLSP RAARVE+LKA+FG TILKAQQ   
Subjt:  MKMMQTKRRYITCHSSNPKVTQFKT----------------------------------------PPTKISVLSPTRAARVEMLKARFGGTILKAQQ---

Query:  ----------------TTKTC---------AKEALNKIKLTFDFNENLDAMREFEKFI
                        T K C         ++EAL+KI   F+FNENLD+MREFEK +
Subjt:  ----------------TTKTC---------AKEALNKIKLTFDFNENLDAMREFEKFI

TYK19957.1 hypothetical protein E5676_scaffold134G00700 [Cucumis melo var. makuwa]4.5e-0834.39Show/hide
Query:  MKMMQTKRRYITCH----------------------------SSNPKVTQFKTPPTK---------------ISVLSPTRAARVEMLKARFGGTILKAQQ
        M+MMQ KRRY+                               +SN ++ +F++P +K               I VLSP +AARVEMLK +FG TILKAQQ
Subjt:  MKMMQTKRRYITCH----------------------------SSNPKVTQFKTPPTK---------------ISVLSPTRAARVEMLKARFGGTILKAQQ

Query:  ----------------TTKTC--------AKEALNKIKLTFDFNENLDAMREFEKFI
                          K C        ++E+L+KIK  FDFNENLD+MR+FE+ +
Subjt:  ----------------TTKTC--------AKEALNKIKLTFDFNENLDAMREFEKFI

TrEMBL top hitse value%identityAlignment
A0A0A0KMZ1 Uncharacterized protein4.0e-1039.24Show/hide
Query:  MKMMQTKRRYITCHSSNPKV--------------------------TQFK--------------TPPTKISVLSPTRAARVEMLKARFGGTILKAQQ---
        M+MMQTKRRYI  H   PKV                          T FK               P T I VLSP RAARVE+LKA+FG TI KAQQ   
Subjt:  MKMMQTKRRYITCHSSNPKV--------------------------TQFK--------------TPPTKISVLSPTRAARVEMLKARFGGTILKAQQ---

Query:  ----------------TTKTC---------AKEALNK-IKLTFDFNENLDAMREFEKF
                        T KTC         ++EAL+K I   FDFNENLD+M+EFE++
Subjt:  ----------------TTKTC---------AKEALNK-IKLTFDFNENLDAMREFEKF

A0A0A0KRB6 Uncharacterized protein4.4e-0944.23Show/hide
Query:  CHSSNPKVTQFKTPPTKISVLSPTRAARVEMLKARFGGTILKAQQ------------------TTKTCA--------KEALNKIKLTFDFNENLDAMREF
        C S    +      P  I VLSP RAARVE+LKA+FG TILKAQQ                  T   C+        +EAL+KI   FDFNENLD+MREF
Subjt:  CHSSNPKVTQFKTPPTKISVLSPTRAARVEMLKARFGGTILKAQQ------------------TTKTCA--------KEALNKIKLTFDFNENLDAMREF

Query:  EKFI
         K +
Subjt:  EKFI

A0A5A7VFH7 Uncharacterized protein2.2e-0834.39Show/hide
Query:  MKMMQTKRRYITCH----------------------------SSNPKVTQFKTPPTK---------------ISVLSPTRAARVEMLKARFGGTILKAQQ
        M+MMQ KRRY+                               +SN ++ +F++P +K               I VLSP +AARVEMLK +FG TILKAQQ
Subjt:  MKMMQTKRRYITCH----------------------------SSNPKVTQFKTPPTK---------------ISVLSPTRAARVEMLKARFGGTILKAQQ

Query:  ----------------TTKTC--------AKEALNKIKLTFDFNENLDAMREFEKFI
                          K C        ++E+L+KIK  FDFNENLD+MR+FE+ +
Subjt:  ----------------TTKTC--------AKEALNKIKLTFDFNENLDAMREFEKFI

A0A5D3D8Q3 Uncharacterized protein2.2e-0834.39Show/hide
Query:  MKMMQTKRRYITCH----------------------------SSNPKVTQFKTPPTK---------------ISVLSPTRAARVEMLKARFGGTILKAQQ
        M+MMQ KRRY+                               +SN ++ +F++P +K               I VLSP +AARVEMLK +FG TILKAQQ
Subjt:  MKMMQTKRRYITCH----------------------------SSNPKVTQFKTPPTK---------------ISVLSPTRAARVEMLKARFGGTILKAQQ

Query:  ----------------TTKTC--------AKEALNKIKLTFDFNENLDAMREFEKFI
                          K C        ++E+L+KIK  FDFNENLD+MR+FE+ +
Subjt:  ----------------TTKTC--------AKEALNKIKLTFDFNENLDAMREFEKFI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGATGATGCAGACAAAACGGAGATACATAACTTGTCATTCTTCAAATCCCAAGGTAACCCAATTCAAAACTCCACCTACAAAGATTAGTGTATTGTCACCTACAAG
GGCTGCTCGGGTTGAGATGCTGAAAGCCAGATTTGGTGGTACCATTTTGAAAGCTCAACAAACAACAAAGACGTGTGCAAAAGAAGCCCTTAACAAGATCAAGCTGACAT
TTGATTTTAATGAGAATCTTGATGCCATGAGAGAATTTGAAAAGTTCATTGGACTGATCTCGAGTGAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGATGATGCAGACAAAACGGAGATACATAACTTGTCATTCTTCAAATCCCAAGGTAACCCAATTCAAAACTCCACCTACAAAGATTAGTGTATTGTCACCTACAAG
GGCTGCTCGGGTTGAGATGCTGAAAGCCAGATTTGGTGGTACCATTTTGAAAGCTCAACAAACAACAAAGACGTGTGCAAAAGAAGCCCTTAACAAGATCAAGCTGACAT
TTGATTTTAATGAGAATCTTGATGCCATGAGAGAATTTGAAAAGTTCATTGGACTGATCTCGAGTGAA
Protein sequenceShow/hide protein sequence
MKMMQTKRRYITCHSSNPKVTQFKTPPTKISVLSPTRAARVEMLKARFGGTILKAQQTTKTCAKEALNKIKLTFDFNENLDAMREFEKFIGLISSE