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ClCG05G013165 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG05G013165
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionC2H2-type domain-containing protein
Genome locationCG_Chr05:18472698..18473470
RNA-Seq ExpressionClCG05G013165
SyntenyClCG05G013165
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6581077.1 hypothetical protein SDJN03_21079, partial [Cucurbita argyrosperma subsp. sororia]1.2e-1788.33Show/hide
Query:  EFFLRQFCDAHTCSGKPKPFSRGRQVSCFIARTSAFYIVISVLTVLFVLFFYVFIYLYKR
        EFFLRQFCDAHTCSGKPKPFSRGRQV     RTS FYIVISVLTV+FVLFFYVFIYLYKR
Subjt:  EFFLRQFCDAHTCSGKPKPFSRGRQVSCFIARTSAFYIVISVLTVLFVLFFYVFIYLYKR
KAG7017805.1 hypothetical protein SDJN02_19671 [Cucurbita argyrosperma subsp. argyrosperma]5.8e-2086.36Show/hide
Query:  EFFLRQFCDAHTCSGKPKPFSRGRQVSCFI------ARTSAFYIVISVLTVLFVLFFYVFIYLYKR
        EFFLRQFCDAHTCSGKPKPFSRGRQVSCFI       RTS FYIVISVLTV+FVLFFYVFIYLYKR
Subjt:  EFFLRQFCDAHTCSGKPKPFSRGRQVSCFI------ARTSAFYIVISVLTVLFVLFFYVFIYLYKR
XP_022935004.1 uncharacterized protein LOC111441996 [Cucurbita moschata]1.2e-1788.33Show/hide
Query:  EFFLRQFCDAHTCSGKPKPFSRGRQVSCFIARTSAFYIVISVLTVLFVLFFYVFIYLYKR
        EFFLRQFCDAHTCSGKPKPFSRGRQV     RTS FYIVISVLTV+FVLFFYVFIYLYKR
Subjt:  EFFLRQFCDAHTCSGKPKPFSRGRQVSCFIARTSAFYIVISVLTVLFVLFFYVFIYLYKR
XP_022984012.1 uncharacterized protein LOC111482459 [Cucurbita maxima]1.2e-1788.33Show/hide
Query:  EFFLRQFCDAHTCSGKPKPFSRGRQVSCFIARTSAFYIVISVLTVLFVLFFYVFIYLYKR
        EFFLRQFCDAHTCSGKPKPFSRGRQV     RTS FYIVISVLTV+FVLFFYVFIYLYKR
Subjt:  EFFLRQFCDAHTCSGKPKPFSRGRQVSCFIARTSAFYIVISVLTVLFVLFFYVFIYLYKR
XP_023526204.1 uncharacterized protein LOC111789755 [Cucurbita pepo subsp. pepo]1.6e-1786.67Show/hide
Query:  EFFLRQFCDAHTCSGKPKPFSRGRQVSCFIARTSAFYIVISVLTVLFVLFFYVFIYLYKR
        EFFLRQFCDAHTCSGKPKPFSRGRQV     RTS FY+VISVLTV+FVLFFYVFIYLYKR
Subjt:  EFFLRQFCDAHTCSGKPKPFSRGRQVSCFIARTSAFYIVISVLTVLFVLFFYVFIYLYKR
TrEMBL top hitse value%identityAlignment
A0A1S3BMS8 uncharacterized protein LOC1034917588.5e-1783.33Show/hide
Query:  EFFLRQFCDAHTCSGKPKPFSRGRQVSCFIARTSAFYIVISVLTVLFVLFFYVFIYLYKR
        EFFLRQFCDAHTCSGKPKPFSRGRQV     RTS FYIVISVLT+LFV+FFYVF YLY R
Subjt:  EFFLRQFCDAHTCSGKPKPFSRGRQVSCFIARTSAFYIVISVLTVLFVLFFYVFIYLYKR
A0A5A7URM7 Zinc finger family protein8.5e-1783.33Show/hide
Query:  EFFLRQFCDAHTCSGKPKPFSRGRQVSCFIARTSAFYIVISVLTVLFVLFFYVFIYLYKR
        EFFLRQFCDAHTCSGKPKPFSRGRQV     RTS FYIVISVLT+LFV+FFYVF YLY R
Subjt:  EFFLRQFCDAHTCSGKPKPFSRGRQVSCFIARTSAFYIVISVLTVLFVLFFYVFIYLYKR
A0A6J1DL16 uncharacterized protein LOC1110215151.9e-1683.33Show/hide
Query:  EFFLRQFCDAHTCSGKPKPFSRGRQVSCFIARTSAFYIVISVLTVLFVLFFYVFIYLYKR
        EFFLRQFCDAHTCSGKPKPFS+G++V     RTS FYIVIS+LTVLFVLFFYVFIYLYKR
Subjt:  EFFLRQFCDAHTCSGKPKPFSRGRQVSCFIARTSAFYIVISVLTVLFVLFFYVFIYLYKR
A0A6J1F459 uncharacterized protein LOC1114419965.9e-1888.33Show/hide
Query:  EFFLRQFCDAHTCSGKPKPFSRGRQVSCFIARTSAFYIVISVLTVLFVLFFYVFIYLYKR
        EFFLRQFCDAHTCSGKPKPFSRGRQV     RTS FYIVISVLTV+FVLFFYVFIYLYKR
Subjt:  EFFLRQFCDAHTCSGKPKPFSRGRQVSCFIARTSAFYIVISVLTVLFVLFFYVFIYLYKR
A0A6J1J0Y1 uncharacterized protein LOC1114824595.9e-1888.33Show/hide
Query:  EFFLRQFCDAHTCSGKPKPFSRGRQVSCFIARTSAFYIVISVLTVLFVLFFYVFIYLYKR
        EFFLRQFCDAHTCSGKPKPFSRGRQV     RTS FYIVISVLTV+FVLFFYVFIYLYKR
Subjt:  EFFLRQFCDAHTCSGKPKPFSRGRQVSCFIARTSAFYIVISVLTVLFVLFFYVFIYLYKR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G40710.1 zinc finger (C2H2 type) family protein7.1e-0845Show/hide
Query:  EFFLRQFCDAHTCSGKPKPFSRGRQVSCFIARTSAFYIVISVLTVLFVLFFYVFIYLYKR
        +FFLRQFCDAHTCSG  KP S+  +      + S  YI+ S++ ++ +L +Y F+YL++R
Subjt:  EFFLRQFCDAHTCSGKPKPFSRGRQVSCFIARTSAFYIVISVLTVLFVLFFYVFIYLYKR
AT5G63280.1 C2H2-like zinc finger protein6.4e-0946.67Show/hide
Query:  EFFLRQFCDAHTCSGKPKPFSRGRQVSCFIARTSAFYIVISVLTVLFVLFFYVFIYLYKR
        E FLRQFCDAHTC+G  KPF RG +      ++  FY+ IS+LT++ +  FY+ ++L++R
Subjt:  EFFLRQFCDAHTCSGKPKPFSRGRQVSCFIARTSAFYIVISVLTVLFVLFFYVFIYLYKR

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTAGAATTCTTCTTGCGCCAGTTCTGTGATGCACACACATGTAGCGGAAAGCCAAAACCTTTCTCCAGAGGTCGACAGGTAAGTTGTTTCATTGCTAGGACGAGTGC
GTTCTACATTGTGATTTCAGTTTTGACAGTCCTTTTTGTGCTGTTTTTCTATGTCTTCATTTACTTGTATAAGAGGTATATTTCTTTTGCCTACCCTCATTTGTATGATC
ATAAGATCTTCGACTTTGATTTGACAGTCGCACTCGTCTTACAGGGGAATGAGAACTCGACCACAGGTACTGAAGCGTCTCTCACAAAGTGGAAGAAAGAAAAAACCTTC
ATAGATAGAACCTTTGGCCCTTTCAATAATAACAATATGTTGATTTTATTTTCGACTCATTTTTTAGAGGAAGAGAGAGGGCAAAGCTTGTTCTTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTAGAATTCTTCTTGCGCCAGTTCTGTGATGCACACACATGTAGCGGAAAGCCAAAACCTTTCTCCAGAGGTCGACAGGTAAGTTGTTTCATTGCTAGGACGAGTGC
GTTCTACATTGTGATTTCAGTTTTGACAGTCCTTTTTGTGCTGTTTTTCTATGTCTTCATTTACTTGTATAAGAGGTATATTTCTTTTGCCTACCCTCATTTGTATGATC
ATAAGATCTTCGACTTTGATTTGACAGTCGCACTCGTCTTACAGGGGAATGAGAACTCGACCACAGGTACTGAAGCGTCTCTCACAAAGTGGAAGAAAGAAAAAACCTTC
ATAGATAGAACCTTTGGCCCTTTCAATAATAACAATATGTTGATTTTATTTTCGACTCATTTTTTAGAGGAAGAGAGAGGGCAAAGCTTGTTCTTTTAA
Protein sequenceShow/hide protein sequence
MVEFFLRQFCDAHTCSGKPKPFSRGRQVSCFIARTSAFYIVISVLTVLFVLFFYVFIYLYKRYISFAYPHLYDHKIFDFDLTVALVLQGNENSTTGTEASLTKWKKEKTF
IDRTFGPFNNNNMLILFSTHFLEEERGQSLFF