; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

ClCG05G013640 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG05G013640
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationCG_Chr05:19825948..19826972
RNA-Seq ExpressionClCG05G013640
SyntenyClCG05G013640
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0026100.1 uncharacterized protein E6C27_scaffold19G00360 [Cucumis melo var. makuwa]1.0e-3740.78Show/hide
Query:  MTSKVVVQLMGYNTANELWDAIHSLFDVQSRAEEDYLHQ--------------YLKLMKLHSNNLAQAGSPVTTKTLVSQVLLGLDEEYNPVVV------
        MT  V +QLMG+    +LWDA    F VQSRAEED+L Q              YL +MK + +NL Q GSPV  + L+SQVLLGLDE YN V+V      
Subjt:  MTSKVVVQLMGYNTANELWDAIHSLFDVQSRAEEDYLHQ--------------YLKLMKLHSNNLAQAGSPVTTKTLVSQVLLGLDEEYNPVVV------

Query:  --------SEILSFEKRLKHQNS---AKSIGAFRHTTSINAAYSRSSNGGKPSNQGNFQSNNQINNRSQYSGQRGNNNNKYNGGNYNNFHGRGKGYAKRL
                S++L FEK LKHQN+    K  G    + ++N A   + NG +  +   F       NR  +SGQRGN NN             GK     L
Subjt:  --------SEILSFEKRLKHQNS---AKSIGAFRHTTSINAAYSRSSNGGKPSNQGNFQSNNQINNRSQYSGQRGNNNNKYNGGNYNNFHGRGKGYAKRL

Query:  DILLMFDKEFSPPSYQNKGNGSSSSSLPGENPTAFLATQNSNPFLAPHETIADPSWYVDSSVTNHVTANCNNLANPAEYGGK
             F+KEFS P  Q++   SS+ S+   NP  F++TQN+ PF  P +T+ DP+WY+DS  TNHVT  C+N+ NP EY G+
Subjt:  DILLMFDKEFSPPSYQNKGNGSSSSSLPGENPTAFLATQNSNPFLAPHETIADPSWYVDSSVTNHVTANCNNLANPAEYGGK

TYK05754.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]2.6e-4940.23Show/hide
Query:  VVVQLMGYNTANELWDAIHSLFDVQSRAEEDYLHQ--------------YLKLMKLHSNNLAQAGSPVTTKTLVSQVLLGLDEEYNPVVV----------
        + +QLMG+  A +LW+A   LF VQSRAEED+L Q              YL++MK +S+ L QAGSPV  +  +SQ LLGLDE YNPV+           
Subjt:  VVVQLMGYNTANELWDAIHSLFDVQSRAEEDYLHQ--------------YLKLMKLHSNNLAQAGSPVTTKTLVSQVLLGLDEEYNPVVV----------

Query:  ----SEILSFEKRLKHQNSAKSIGAFRHTTSINAAYSRSSNGGKPSNQGNFQSNNQINNRSQYSGQRGNNNNKYNGGNYNNFHGRGKGYAKR--------
            SE+L+FEKRL+HQ++ K+         +N A +R+S+  +  +   F  NN+ N++    GQR         G +N   GRGKG   +        
Subjt:  ----SEILSFEKRLKHQNSAKSIGAFRHTTSINAAYSRSSNGGKPSNQGNFQSNNQINNRSQYSGQRGNNNNKYNGGNYNNFHGRGKGYAKR--------

Query:  -----LDILLMFDKEFSPPSYQNKGNGSSSSSLPGENPTAFLATQNSNPFLAPHETIADPSWYVDSSVTNHVTANCNNLANPAEYGGKELVTIGNGHKLK
             L     F+KEF  P  Q++G  SS+ S    N T  +  Q+ N F A  +T+ + +WY+DS  TNH+T   +NL+NP+EY G E + +GNG  L 
Subjt:  -----LDILLMFDKEFSPPSYQNKGNGSSSSSLPGENPTAFLATQNSNPFLAPHETIADPSWYVDSSVTNHVTANCNNLANPAEYGGKELVTIGNGHKLK

Query:  ISHIGNSCLTDGNSKLSLENVLCVPAIAKHLVSTSKLTQDKAI
        IS+IGN+ LTDG + L+L+NVLCVP I K+LVS SKL QD  +
Subjt:  ISHIGNSCLTDGNSKLSLENVLCVPAIAKHLVSTSKLTQDKAI

XP_016902197.1 PREDICTED: uncharacterized protein LOC107991581 isoform X1 [Cucumis melo]1.1e-5042.68Show/hide
Query:  MTSKVVVQLMGYNTANELWDAIHSLFDVQSRAEEDYLHQYLKLMKLHSNNLAQAGSPVTTKTLVSQVLLGLDEEYNPVVV--------------SEILSF
        MT  V +QLMG+    +LWDA    F VQSRAEED+L Q L+                TT+        GLDE YN V+V              S++L F
Subjt:  MTSKVVVQLMGYNTANELWDAIHSLFDVQSRAEEDYLHQYLKLMKLHSNNLAQAGSPVTTKTLVSQVLLGLDEEYNPVVV--------------SEILSF

Query:  EKRLKHQNS-AKSIGAFRHTTSINAAYSRSSNGGKPSNQGNFQSNNQINNRSQYSGQRGNNNNKYNGGNYNNFHGRGKGYAKRLDILLMFDKEFSPPSYQ
        EKRLKHQN+  K+ G    + ++N A   + NG +  +   F       NR  +SGQRGN NN             GK     L     F+KEFS P  Q
Subjt:  EKRLKHQNS-AKSIGAFRHTTSINAAYSRSSNGGKPSNQGNFQSNNQINNRSQYSGQRGNNNNKYNGGNYNNFHGRGKGYAKRLDILLMFDKEFSPPSYQ

Query:  NKGNGSSSSSLPGENPTAFLATQNSNPFLAPHETIADPSWYVDSSVTNHVTANCNNLANPAEYGGKELVTIGNGHKLKISHIGNSCLTDGNSKLSLENVL
        N+   SS+ S+   NP  F++TQN+ PF  P +T+ DP+WY+DS  TNHVT  C+N+ NP EY G E VT+GNG++L IS++GN+CLTDG+  L L+N+L
Subjt:  NKGNGSSSSSLPGENPTAFLATQNSNPFLAPHETIADPSWYVDSSVTNHVTANCNNLANPAEYGGKELVTIGNGHKLKISHIGNSCLTDGNSKLSLENVL

Query:  CVPAIAKHLVSTSKLTQDKAI
        CVP IAK+L+S SKL QD  I
Subjt:  CVPAIAKHLVSTSKLTQDKAI

XP_022151683.1 uncharacterized protein LOC111019598 [Momordica charantia]1.4e-4240.73Show/hide
Query:  MTSKVVVQLMGYNTANELWDAIHSLFDVQSRAEEDYLHQ--------------YLKLMKLHSNNLAQAGSPVTTKTLVSQVLLGLDEEYNPVVV------
        M + V +Q+MG++T+ ELW A+  LF VQSRAE DYL Q              YLKLMK H++NLA AGS V+ + LVSQVL GLDEEYNP+VV      
Subjt:  MTSKVVVQLMGYNTANELWDAIHSLFDVQSRAEEDYLHQ--------------YLKLMKLHSNNLAQAGSPVTTKTLVSQVLLGLDEEYNPVVV------

Query:  --------SEILSFEKRLKHQNSAKSIGAFRHTTSINAAYSRSSNGGKPSNQGNFQSNNQINNRSQYSGQRGNNNNKYNGGNYNNFHGRGKGYAKRLDIL
                +E+L++EKRL++QNS KS                    G P NQ    S N ++ RS  + QR NN N  +G N +    RG GY +     
Subjt:  --------SEILSFEKRLKHQNSAKSIGAFRHTTSINAAYSRSSNGGKPSNQGNFQSNNQINNRSQYSGQRGNNNNKYNGGNYNNFHGRGKGYAKRLDIL

Query:  LMFDKEFSPPSYQNKGNGSSSSSLPGENPTAFLATQNSNPFLAPHETIADPSWYVDSSVTNHVTANCNNLANPAEYGGKELVTIGNGHKLKISHIGNSCL
           ++   P   Q+K    S+S      P  F A   S     P ET+ DPSWY DS  T+HVTAN NN+    +Y G E V + NG+KL ISHIG++ +
Subjt:  LMFDKEFSPPSYQNKGNGSSSSSLPGENPTAFLATQNSNPFLAPHETIADPSWYVDSSVTNHVTANCNNLANPAEYGGKELVTIGNGHKLKISHIGNSCL

Query:  TDGNSKLSLENVLCVPAIAKHLVSTSKLT
              L L++VL VP IAK+L   S  T
Subjt:  TDGNSKLSLENVLCVPAIAKHLVSTSKLT

XP_038905161.1 uncharacterized protein LOC120091275 isoform X1 [Benincasa hispida]1.1e-3636.45Show/hide
Query:  MTSKVVVQLMGYNTANELWDAIHSLFDVQSRAEEDYL--------------HQYLKLMKLHSNNLAQAGSPVTTKTLVSQVLLGLDEEYNPVVV------
        MT +V +Q+MG   A +LW +I  LF VQSR EEDYL               +YL+ MK++++NL QAGSP+  +TLVSQVLLGLDEEYN +V       
Subjt:  MTSKVVVQLMGYNTANELWDAIHSLFDVQSRAEEDYL--------------HQYLKLMKLHSNNLAQAGSPVTTKTLVSQVLLGLDEEYNPVVV------

Query:  --------SEILSFEKRLKHQNSAKSIGAFRH--TTSINAAYSRSSNGGKPSNQGNFQSNNQINNRSQYSGQRGNNNNKYNGGNYNNFHGRGKGYAKRLD
                SE+L +E+RL+HQ++ K+   F      S+N   +R  N    +N          +N+S   GQRG       GG +    GRG+   K + 
Subjt:  --------SEILSFEKRLKHQNSAKSIGAFRH--TTSINAAYSRSSNGGKPSNQGNFQSNNQINNRSQYSGQRGNNNNKYNGGNYNNFHGRGKGYAKRLD

Query:  ILL------------MFDKEFSPPSYQNK----GNGSSSSSLPGENPTAFLATQNSNPFLAPHETIADPSWYVDSSVTNHVTANCNNLANPAEYGGKELV
         +              + ++F P S QNK     N  + ++ P  +PTA      SNPFL   E + D +WY DS  +NHVT++ NNL NP EY      
Subjt:  ILL------------MFDKEFSPPSYQNK----GNGSSSSSLPGENPTAFLATQNSNPFLAPHETIADPSWYVDSSVTNHVTANCNNLANPAEYGGKELV

Query:  TIGNGHKLKISHIGNSCLTDGNSKLSLENVLC
          G G+ L ISH+G  CL+     L L ++LC
Subjt:  TIGNGHKLKISHIGNSCLTDGNSKLSLENVLC

TrEMBL top hitse value%identityAlignment
A0A1S4E1U6 uncharacterized protein LOC107991581 isoform X15.1e-5142.68Show/hide
Query:  MTSKVVVQLMGYNTANELWDAIHSLFDVQSRAEEDYLHQYLKLMKLHSNNLAQAGSPVTTKTLVSQVLLGLDEEYNPVVV--------------SEILSF
        MT  V +QLMG+    +LWDA    F VQSRAEED+L Q L+                TT+        GLDE YN V+V              S++L F
Subjt:  MTSKVVVQLMGYNTANELWDAIHSLFDVQSRAEEDYLHQYLKLMKLHSNNLAQAGSPVTTKTLVSQVLLGLDEEYNPVVV--------------SEILSF

Query:  EKRLKHQNS-AKSIGAFRHTTSINAAYSRSSNGGKPSNQGNFQSNNQINNRSQYSGQRGNNNNKYNGGNYNNFHGRGKGYAKRLDILLMFDKEFSPPSYQ
        EKRLKHQN+  K+ G    + ++N A   + NG +  +   F       NR  +SGQRGN NN             GK     L     F+KEFS P  Q
Subjt:  EKRLKHQNS-AKSIGAFRHTTSINAAYSRSSNGGKPSNQGNFQSNNQINNRSQYSGQRGNNNNKYNGGNYNNFHGRGKGYAKRLDILLMFDKEFSPPSYQ

Query:  NKGNGSSSSSLPGENPTAFLATQNSNPFLAPHETIADPSWYVDSSVTNHVTANCNNLANPAEYGGKELVTIGNGHKLKISHIGNSCLTDGNSKLSLENVL
        N+   SS+ S+   NP  F++TQN+ PF  P +T+ DP+WY+DS  TNHVT  C+N+ NP EY G E VT+GNG++L IS++GN+CLTDG+  L L+N+L
Subjt:  NKGNGSSSSSLPGENPTAFLATQNSNPFLAPHETIADPSWYVDSSVTNHVTANCNNLANPAEYGGKELVTIGNGHKLKISHIGNSCLTDGNSKLSLENVL

Query:  CVPAIAKHLVSTSKLTQDKAI
        CVP IAK+L+S SKL QD  I
Subjt:  CVPAIAKHLVSTSKLTQDKAI

A0A1S4E1U9 uncharacterized protein LOC107991581 isoform X45.9e-3134.89Show/hide
Query:  MTSKVVVQLMGYNTANELWDAIHSLFDVQSRAEEDYLHQYLKLMKLHSNNLAQAGSPVTTKTLVSQVLLGLDEEYNPVVV--------------SEILSF
        MT  V +QLMG+    +LWDA    F VQSRAEED+L Q L+                TT+        GLDE YN V+V              S++L F
Subjt:  MTSKVVVQLMGYNTANELWDAIHSLFDVQSRAEEDYLHQYLKLMKLHSNNLAQAGSPVTTKTLVSQVLLGLDEEYNPVVV--------------SEILSF

Query:  EKRLKHQNS-AKSIGAFRHTTSINAAYSRSSNGGKPSNQGNFQSNNQINNRSQYSGQRGNNNNKYNGGNYNNFHGRGKGYAKRLDILLMFDKEFSPPSYQ
        EKRLKHQN+  K+ G    + ++N A   + NG +  +   F       NR  +SGQRGN NN                                     
Subjt:  EKRLKHQNS-AKSIGAFRHTTSINAAYSRSSNGGKPSNQGNFQSNNQINNRSQYSGQRGNNNNKYNGGNYNNFHGRGKGYAKRLDILLMFDKEFSPPSYQ

Query:  NKGNGSSSSSLPGENPTAFLATQNSNPFLAPHETIADPSWYVDSSVTNHVTANCNNLANPAEYGGKELVTIGNGHKLKISHIGNSCLTDGNSKLSLENVL
                       PT  L                      DS  TNHVT  C+N+ NP EY G E VT+GNG++L IS++GN+CLTDG+  L L+N+L
Subjt:  NKGNGSSSSSLPGENPTAFLATQNSNPFLAPHETIADPSWYVDSSVTNHVTANCNNLANPAEYGGKELVTIGNGHKLKISHIGNSCLTDGNSKLSLENVL

Query:  CVPAIAKHLVSTSKLTQDKAI
        CVP IAK+L+S SKL QD  I
Subjt:  CVPAIAKHLVSTSKLTQDKAI

A0A5A7SIT7 Uncharacterized protein5.0e-3840.78Show/hide
Query:  MTSKVVVQLMGYNTANELWDAIHSLFDVQSRAEEDYLHQ--------------YLKLMKLHSNNLAQAGSPVTTKTLVSQVLLGLDEEYNPVVV------
        MT  V +QLMG+    +LWDA    F VQSRAEED+L Q              YL +MK + +NL Q GSPV  + L+SQVLLGLDE YN V+V      
Subjt:  MTSKVVVQLMGYNTANELWDAIHSLFDVQSRAEEDYLHQ--------------YLKLMKLHSNNLAQAGSPVTTKTLVSQVLLGLDEEYNPVVV------

Query:  --------SEILSFEKRLKHQNS---AKSIGAFRHTTSINAAYSRSSNGGKPSNQGNFQSNNQINNRSQYSGQRGNNNNKYNGGNYNNFHGRGKGYAKRL
                S++L FEK LKHQN+    K  G    + ++N A   + NG +  +   F       NR  +SGQRGN NN             GK     L
Subjt:  --------SEILSFEKRLKHQNS---AKSIGAFRHTTSINAAYSRSSNGGKPSNQGNFQSNNQINNRSQYSGQRGNNNNKYNGGNYNNFHGRGKGYAKRL

Query:  DILLMFDKEFSPPSYQNKGNGSSSSSLPGENPTAFLATQNSNPFLAPHETIADPSWYVDSSVTNHVTANCNNLANPAEYGGK
             F+KEFS P  Q++   SS+ S+   NP  F++TQN+ PF  P +T+ DP+WY+DS  TNHVT  C+N+ NP EY G+
Subjt:  DILLMFDKEFSPPSYQNKGNGSSSSSLPGENPTAFLATQNSNPFLAPHETIADPSWYVDSSVTNHVTANCNNLANPAEYGGK

A0A5D3C373 Retrovirus-related Pol polyprotein from transposon TNT 1-941.3e-4940.23Show/hide
Query:  VVVQLMGYNTANELWDAIHSLFDVQSRAEEDYLHQ--------------YLKLMKLHSNNLAQAGSPVTTKTLVSQVLLGLDEEYNPVVV----------
        + +QLMG+  A +LW+A   LF VQSRAEED+L Q              YL++MK +S+ L QAGSPV  +  +SQ LLGLDE YNPV+           
Subjt:  VVVQLMGYNTANELWDAIHSLFDVQSRAEEDYLHQ--------------YLKLMKLHSNNLAQAGSPVTTKTLVSQVLLGLDEEYNPVVV----------

Query:  ----SEILSFEKRLKHQNSAKSIGAFRHTTSINAAYSRSSNGGKPSNQGNFQSNNQINNRSQYSGQRGNNNNKYNGGNYNNFHGRGKGYAKR--------
            SE+L+FEKRL+HQ++ K+         +N A +R+S+  +  +   F  NN+ N++    GQR         G +N   GRGKG   +        
Subjt:  ----SEILSFEKRLKHQNSAKSIGAFRHTTSINAAYSRSSNGGKPSNQGNFQSNNQINNRSQYSGQRGNNNNKYNGGNYNNFHGRGKGYAKR--------

Query:  -----LDILLMFDKEFSPPSYQNKGNGSSSSSLPGENPTAFLATQNSNPFLAPHETIADPSWYVDSSVTNHVTANCNNLANPAEYGGKELVTIGNGHKLK
             L     F+KEF  P  Q++G  SS+ S    N T  +  Q+ N F A  +T+ + +WY+DS  TNH+T   +NL+NP+EY G E + +GNG  L 
Subjt:  -----LDILLMFDKEFSPPSYQNKGNGSSSSSLPGENPTAFLATQNSNPFLAPHETIADPSWYVDSSVTNHVTANCNNLANPAEYGGKELVTIGNGHKLK

Query:  ISHIGNSCLTDGNSKLSLENVLCVPAIAKHLVSTSKLTQDKAI
        IS+IGN+ LTDG + L+L+NVLCVP I K+LVS SKL QD  +
Subjt:  ISHIGNSCLTDGNSKLSLENVLCVPAIAKHLVSTSKLTQDKAI

A0A6J1DCW4 uncharacterized protein LOC1110195986.7e-4340.73Show/hide
Query:  MTSKVVVQLMGYNTANELWDAIHSLFDVQSRAEEDYLHQ--------------YLKLMKLHSNNLAQAGSPVTTKTLVSQVLLGLDEEYNPVVV------
        M + V +Q+MG++T+ ELW A+  LF VQSRAE DYL Q              YLKLMK H++NLA AGS V+ + LVSQVL GLDEEYNP+VV      
Subjt:  MTSKVVVQLMGYNTANELWDAIHSLFDVQSRAEEDYLHQ--------------YLKLMKLHSNNLAQAGSPVTTKTLVSQVLLGLDEEYNPVVV------

Query:  --------SEILSFEKRLKHQNSAKSIGAFRHTTSINAAYSRSSNGGKPSNQGNFQSNNQINNRSQYSGQRGNNNNKYNGGNYNNFHGRGKGYAKRLDIL
                +E+L++EKRL++QNS KS                    G P NQ    S N ++ RS  + QR NN N  +G N +    RG GY +     
Subjt:  --------SEILSFEKRLKHQNSAKSIGAFRHTTSINAAYSRSSNGGKPSNQGNFQSNNQINNRSQYSGQRGNNNNKYNGGNYNNFHGRGKGYAKRLDIL

Query:  LMFDKEFSPPSYQNKGNGSSSSSLPGENPTAFLATQNSNPFLAPHETIADPSWYVDSSVTNHVTANCNNLANPAEYGGKELVTIGNGHKLKISHIGNSCL
           ++   P   Q+K    S+S      P  F A   S     P ET+ DPSWY DS  T+HVTAN NN+    +Y G E V + NG+KL ISHIG++ +
Subjt:  LMFDKEFSPPSYQNKGNGSSSSSLPGENPTAFLATQNSNPFLAPHETIADPSWYVDSSVTNHVTANCNNLANPAEYGGKELVTIGNGHKLKISHIGNSCL

Query:  TDGNSKLSLENVLCVPAIAKHLVSTSKLT
              L L++VL VP IAK+L   S  T
Subjt:  TDGNSKLSLENVLCVPAIAKHLVSTSKLT

SwissProt top hitse value%identityAlignment
Q94HW2 Retrovirus-related Pol polyprotein from transposon RE19.4e-1025.08Show/hide
Query:  TANELWDAIHSLFDVQSRAEEDYLH--------------QYLKLMKLHSNNLAQAGSPVTTKTLVSQVLLGLDEEYNPVV-----------VSEILSFEK
        TA ++W+ +  ++   S      L                Y++ +    + LA  G P+     V +VL  L EEY PV+           ++EI   E+
Subjt:  TANELWDAIHSLFDVQSRAEEDYLH--------------QYLKLMKLHSNNLAQAGSPVTTKTLVSQVLLGLDEEYNPVV-----------VSEILSFEK

Query:  RLKHQNSAKSIGAFRHTTSINAAYSRSSNGGKPSNQGNFQSNNQINNRSQYSGQRGNNNNKYNGGNYNNFH---GRGKGYAKRLDILLMFDKEFSPPSYQ
         L H++   ++       S       ++N     N     +NN  N  ++Y  +  NNN+K    +  NFH    + K Y  +  I  +        S  
Subjt:  RLKHQNSAKSIGAFRHTTSINAAYSRSSNGGKPSNQGNFQSNNQINNRSQYSGQRGNNNNKYNGGNYNNFH---GRGKGYAKRLDILLMFDKEFSPPSYQ

Query:  NKGNGSSSSSLPGENPTAFLATQNSNPFLAPHETIADPSWYVDSSVTNHVTANCNNLANPAEYGGKELVTIGNGHKLKISHIGNSCLTDGNSKLSLENVL
             S +S  P   P+ F   Q     LA     +  +W +DS  T+H+T++ NNL+    Y G + V + +G  + ISH G++ L+  +  L+L N+L
Subjt:  NKGNGSSSSSLPGENPTAFLATQNSNPFLAPHETIADPSWYVDSSVTNHVTANCNNLANPAEYGGKELVTIGNGHKLKISHIGNSCLTDGNSKLSLENVL

Query:  CVPAIAKHLVSTSKL
         VP I K+L+S  +L
Subjt:  CVPAIAKHLVSTSKL

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE27.5e-0726.21Show/hide
Query:  TANELWDAIHSLFDVQSRAEEDYLHQYLKLMKLHSNNLAQAGSPVTTKTLVSQVLLGLDEEYNPVV-----------VSEI----LSFEKRLKHQNSAKS
        TA ++W+ +  ++     A   Y H          + LA  G P+     V +VL  L ++Y PV+           ++EI    ++ E +L   NSA+ 
Subjt:  TANELWDAIHSLFDVQSRAEEDYLHQYLKLMKLHSNNLAQAGSPVTTKTLVSQVLLGLDEEYNPVV-----------VSEI----LSFEKRLKHQNSAKS

Query:  IGAFRHTTSINAAYSRSSNGGK-PSNQGNFQSNNQINNRSQYSGQRGNNNNKYNGGNYNNFHGR-----GKGY-AKRLDILLMFDKEFSPPSYQNKGNGS
        +       + N    R++N  +  +N+G+ ++ N  NNRS  S Q  ++ ++ +      + GR      +G+ AKR   L  F                
Subjt:  IGAFRHTTSINAAYSRSSNGGK-PSNQGNFQSNNQINNRSQYSGQRGNNNNKYNGGNYNNFHGR-----GKGY-AKRLDILLMFDKEFSPPSYQNKGNGS

Query:  SSSSLPGENPTAFLATQNSNPFLAPHETIADPSWYVDSSVTNHVTANCNNLANPAEYGGKELVTIGNGHKLKISHIGNSCLTDGNSKLSLENVLCVPAIA
        S+S      P A LA   ++P+ A        +W +DS  T+H+T++ NNL+    Y G + V I +G  + I+H G++ L   +  L L  VL VP I 
Subjt:  SSSSLPGENPTAFLATQNSNPFLAPHETIADPSWYVDSSVTNHVTANCNNLANPAEYGGKELVTIGNGHKLKISHIGNSCLTDGNSKLSLENVLCVPAIA

Query:  KHLVSTSKL
        K+L+S  +L
Subjt:  KHLVSTSKL

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGTCGAAAGTTGTTGTTCAACTCATGGGCTACAATACTGCAAATGAGCTTTGGGATGCGATCCACAGCCTGTTCGACGTTCAATCTAGAGCAGAAGAAGATTATCT
TCACCAATATCTGAAACTTATGAAACTTCACTCTAATAATTTAGCCCAAGCTGGAAGTCCGGTGACAACCAAAACGTTGGTGTCACAAGTTCTACTTGGTTTAGACGAGG
AATATAATCCAGTGGTGGTTTCGGAGATACTATCGTTTGAGAAAAGGTTGAAACATCAGAACAGTGCAAAATCAATTGGAGCATTTCGTCATACAACCTCTATTAATGCA
GCCTATAGTAGGTCCTCAAATGGAGGAAAACCTTCAAACCAAGGTAATTTTCAAAGTAATAACCAAATAAACAATCGTTCTCAATACAGTGGACAAAGAGGCAACAACAA
CAACAAATATAATGGAGGAAACTACAACAACTTTCATGGTCGTGGTAAAGGTTATGCAAAAAGATTGGACATATTACTGATGTTTGATAAAGAATTTAGTCCTCCCTCAT
ATCAAAACAAAGGAAATGGAAGTAGTAGTTCAAGCTTACCTGGAGAAAATCCAACAGCATTCTTAGCTACTCAGAATAGTAACCCGTTTCTGGCTCCTCATGAAACTATT
GCGGATCCCAGCTGGTACGTTGATAGCAGTGTGACGAATCATGTTACAGCAAATTGCAATAACTTAGCCAATCCTGCAGAATATGGAGGTAAAGAACTTGTTACAATTGG
CAATGGCCACAAATTAAAAATTTCTCATATAGGAAATTCTTGTTTGACTGATGGAAACTCTAAATTAAGTTTAGAGAATGTGTTGTGTGTGCCTGCTATAGCAAAACATT
TGGTTAGTACTTCCAAACTTACGCAAGATAAGGCTATACAAACTTGA
mRNA sequenceShow/hide mRNA sequence
ATGACGTCGAAAGTTGTTGTTCAACTCATGGGCTACAATACTGCAAATGAGCTTTGGGATGCGATCCACAGCCTGTTCGACGTTCAATCTAGAGCAGAAGAAGATTATCT
TCACCAATATCTGAAACTTATGAAACTTCACTCTAATAATTTAGCCCAAGCTGGAAGTCCGGTGACAACCAAAACGTTGGTGTCACAAGTTCTACTTGGTTTAGACGAGG
AATATAATCCAGTGGTGGTTTCGGAGATACTATCGTTTGAGAAAAGGTTGAAACATCAGAACAGTGCAAAATCAATTGGAGCATTTCGTCATACAACCTCTATTAATGCA
GCCTATAGTAGGTCCTCAAATGGAGGAAAACCTTCAAACCAAGGTAATTTTCAAAGTAATAACCAAATAAACAATCGTTCTCAATACAGTGGACAAAGAGGCAACAACAA
CAACAAATATAATGGAGGAAACTACAACAACTTTCATGGTCGTGGTAAAGGTTATGCAAAAAGATTGGACATATTACTGATGTTTGATAAAGAATTTAGTCCTCCCTCAT
ATCAAAACAAAGGAAATGGAAGTAGTAGTTCAAGCTTACCTGGAGAAAATCCAACAGCATTCTTAGCTACTCAGAATAGTAACCCGTTTCTGGCTCCTCATGAAACTATT
GCGGATCCCAGCTGGTACGTTGATAGCAGTGTGACGAATCATGTTACAGCAAATTGCAATAACTTAGCCAATCCTGCAGAATATGGAGGTAAAGAACTTGTTACAATTGG
CAATGGCCACAAATTAAAAATTTCTCATATAGGAAATTCTTGTTTGACTGATGGAAACTCTAAATTAAGTTTAGAGAATGTGTTGTGTGTGCCTGCTATAGCAAAACATT
TGGTTAGTACTTCCAAACTTACGCAAGATAAGGCTATACAAACTTGA
Protein sequenceShow/hide protein sequence
MTSKVVVQLMGYNTANELWDAIHSLFDVQSRAEEDYLHQYLKLMKLHSNNLAQAGSPVTTKTLVSQVLLGLDEEYNPVVVSEILSFEKRLKHQNSAKSIGAFRHTTSINA
AYSRSSNGGKPSNQGNFQSNNQINNRSQYSGQRGNNNNKYNGGNYNNFHGRGKGYAKRLDILLMFDKEFSPPSYQNKGNGSSSSSLPGENPTAFLATQNSNPFLAPHETI
ADPSWYVDSSVTNHVTANCNNLANPAEYGGKELVTIGNGHKLKISHIGNSCLTDGNSKLSLENVLCVPAIAKHLVSTSKLTQDKAIQT