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ClCG05G013770 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG05G013770
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionProtein FAR1-RELATED SEQUENCE 4
Genome locationCG_Chr05:21026005..21026498
RNA-Seq ExpressionClCG05G013770
SyntenyClCG05G013770
Gene Ontology termsGO:0006313 - transposition, DNA-mediated (biological process)
GO:0016020 - membrane (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0004803 - transposase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061274.1 uncharacterized protein E6C27_scaffold455G001170 [Cucumis melo var. makuwa]1.7e-4567.16Show/hide
Query:  MNDKVSCRPCDVVSYMRRHHGVNVSYDKAWRDREIALNSIRGSPRSSYALLTSFSIALIRENPGIHTTQEYDGEGRFKHYFMALAASIDAWNYYFPIMSV
        MNDK  CRP DV++YM+ HHGVN+SYDKAWR REIALNSIRG+P  SYA+L++FS ALIR NPG +T +E D EGRFK YFMALAASIDAWNY   ++SV
Subjt:  MNDKVSCRPCDVVSYMRRHHGVNVSYDKAWRDREIALNSIRGSPRSSYALLTSFSIALIRENPGIHTTQEYDGEGRFKHYFMALAASIDAWNYYFPIMSV

Query:  DGATLKNKNMGILLSTYTLDGNSQIILLAYVIVD
        DGA +KNK +G L+S  T+D NSQI+  A+V+VD
Subjt:  DGATLKNKNMGILLSTYTLDGNSQIILLAYVIVD

TYK29863.1 MuDRA-like transposase [Cucumis melo var. makuwa]4.0e-4768.42Show/hide
Query:  NDKVSCRPCDVVSYMRRHHGVNVSYDKAWRDREIALNSIRGSPRSSYALLTSFSIALIRENPGIHTTQEYDGEGRFKHYFMALAASIDAWNYYFPIMSVD
        NDK  CRP DV++YM+ HHGVN+SYDKAWR REIALNSIRG+P  SYA+L++FS ALIR NPG +T +E D EGRFK YFMALAASIDAWNY  P++SVD
Subjt:  NDKVSCRPCDVVSYMRRHHGVNVSYDKAWRDREIALNSIRGSPRSSYALLTSFSIALIRENPGIHTTQEYDGEGRFKHYFMALAASIDAWNYYFPIMSVD

Query:  GATLKNKNMGILLSTYTLDGNSQIILLAYVIVD
        GA +KNK +G L+S  T+DGNSQI+ LA+ +VD
Subjt:  GATLKNKNMGILLSTYTLDGNSQIILLAYVIVD

XP_008455803.1 PREDICTED: uncharacterized protein LOC103495899 [Cucumis melo]4.5e-4667.67Show/hide
Query:  NDKVSCRPCDVVSYMRRHHGVNVSYDKAWRDREIALNSIRGSPRSSYALLTSFSIALIRENPGIHTTQEYDGEGRFKHYFMALAASIDAWNYYFPIMSVD
        NDKV CRP DV++YM+ HH VN+SYDKAW  REIALNSIRG+P  SYA+L++FS ALIR NPG +T +E D EGRFK YFMALAASIDAWNY  P++SVD
Subjt:  NDKVSCRPCDVVSYMRRHHGVNVSYDKAWRDREIALNSIRGSPRSSYALLTSFSIALIRENPGIHTTQEYDGEGRFKHYFMALAASIDAWNYYFPIMSVD

Query:  GATLKNKNMGILLSTYTLDGNSQIILLAYVIVD
        GA +KNK +G L+ST T+DGNSQI+ L + +VD
Subjt:  GATLKNKNMGILLSTYTLDGNSQIILLAYVIVD

XP_016901440.1 PREDICTED: uncharacterized protein LOC107991253 [Cucumis melo]1.2e-4667.91Show/hide
Query:  MNDKVSCRPCDVVSYMRRHHGVNVSYDKAWRDREIALNSIRGSPRSSYALLTSFSIALIRENPGIHTTQEYDGEGRFKHYFMALAASIDAWNYYFPIMSV
        MNDK  CRP DV++YM+ HH VNVSYDKAWR REIALNSIRG+P+ SY +L++FS ALIR NPG +T +E D EGRFK YFMALA SIDAWNY  P++SV
Subjt:  MNDKVSCRPCDVVSYMRRHHGVNVSYDKAWRDREIALNSIRGSPRSSYALLTSFSIALIRENPGIHTTQEYDGEGRFKHYFMALAASIDAWNYYFPIMSV

Query:  DGATLKNKNMGILLSTYTLDGNSQIILLAYVIVD
        DGAT+KNK +G L+S  T+DGNSQI+ LA+ +VD
Subjt:  DGATLKNKNMGILLSTYTLDGNSQIILLAYVIVD

XP_016902696.1 PREDICTED: uncharacterized protein LOC107991824 [Cucumis melo]5.3e-4767.91Show/hide
Query:  MNDKVSCRPCDVVSYMRRHHGVNVSYDKAWRDREIALNSIRGSPRSSYALLTSFSIALIRENPGIHTTQEYDGEGRFKHYFMALAASIDAWNYYFPIMSV
        MNDK  CRP DV++YM+ HH VN+SYDKAWR REIALNSIRG+P  SYA+L++FS ALIR NPG +T +E D EGRFK YFMALAASIDAWNY  P++SV
Subjt:  MNDKVSCRPCDVVSYMRRHHGVNVSYDKAWRDREIALNSIRGSPRSSYALLTSFSIALIRENPGIHTTQEYDGEGRFKHYFMALAASIDAWNYYFPIMSV

Query:  DGATLKNKNMGILLSTYTLDGNSQIILLAYVIVD
        DGA +KNK +G L+S  T+DGNSQI+ LA+ +VD
Subjt:  DGATLKNKNMGILLSTYTLDGNSQIILLAYVIVD

TrEMBL top hitse value%identityAlignment
A0A1S3C300 uncharacterized protein LOC1034958992.2e-4667.67Show/hide
Query:  NDKVSCRPCDVVSYMRRHHGVNVSYDKAWRDREIALNSIRGSPRSSYALLTSFSIALIRENPGIHTTQEYDGEGRFKHYFMALAASIDAWNYYFPIMSVD
        NDKV CRP DV++YM+ HH VN+SYDKAW  REIALNSIRG+P  SYA+L++FS ALIR NPG +T +E D EGRFK YFMALAASIDAWNY  P++SVD
Subjt:  NDKVSCRPCDVVSYMRRHHGVNVSYDKAWRDREIALNSIRGSPRSSYALLTSFSIALIRENPGIHTTQEYDGEGRFKHYFMALAASIDAWNYYFPIMSVD

Query:  GATLKNKNMGILLSTYTLDGNSQIILLAYVIVD
        GA +KNK +G L+ST T+DGNSQI+ L + +VD
Subjt:  GATLKNKNMGILLSTYTLDGNSQIILLAYVIVD

A0A1S4E0D5 uncharacterized protein LOC1079912535.7e-4767.91Show/hide
Query:  MNDKVSCRPCDVVSYMRRHHGVNVSYDKAWRDREIALNSIRGSPRSSYALLTSFSIALIRENPGIHTTQEYDGEGRFKHYFMALAASIDAWNYYFPIMSV
        MNDK  CRP DV++YM+ HH VNVSYDKAWR REIALNSIRG+P+ SY +L++FS ALIR NPG +T +E D EGRFK YFMALA SIDAWNY  P++SV
Subjt:  MNDKVSCRPCDVVSYMRRHHGVNVSYDKAWRDREIALNSIRGSPRSSYALLTSFSIALIRENPGIHTTQEYDGEGRFKHYFMALAASIDAWNYYFPIMSV

Query:  DGATLKNKNMGILLSTYTLDGNSQIILLAYVIVD
        DGAT+KNK +G L+S  T+DGNSQI+ LA+ +VD
Subjt:  DGATLKNKNMGILLSTYTLDGNSQIILLAYVIVD

A0A1S4E392 uncharacterized protein LOC1079918242.5e-4767.91Show/hide
Query:  MNDKVSCRPCDVVSYMRRHHGVNVSYDKAWRDREIALNSIRGSPRSSYALLTSFSIALIRENPGIHTTQEYDGEGRFKHYFMALAASIDAWNYYFPIMSV
        MNDK  CRP DV++YM+ HH VN+SYDKAWR REIALNSIRG+P  SYA+L++FS ALIR NPG +T +E D EGRFK YFMALAASIDAWNY  P++SV
Subjt:  MNDKVSCRPCDVVSYMRRHHGVNVSYDKAWRDREIALNSIRGSPRSSYALLTSFSIALIRENPGIHTTQEYDGEGRFKHYFMALAASIDAWNYYFPIMSV

Query:  DGATLKNKNMGILLSTYTLDGNSQIILLAYVIVD
        DGA +KNK +G L+S  T+DGNSQI+ LA+ +VD
Subjt:  DGATLKNKNMGILLSTYTLDGNSQIILLAYVIVD

A0A5A7V1Z6 CCHC-type domain-containing protein8.2e-4667.16Show/hide
Query:  MNDKVSCRPCDVVSYMRRHHGVNVSYDKAWRDREIALNSIRGSPRSSYALLTSFSIALIRENPGIHTTQEYDGEGRFKHYFMALAASIDAWNYYFPIMSV
        MNDK  CRP DV++YM+ HHGVN+SYDKAWR REIALNSIRG+P  SYA+L++FS ALIR NPG +T +E D EGRFK YFMALAASIDAWNY   ++SV
Subjt:  MNDKVSCRPCDVVSYMRRHHGVNVSYDKAWRDREIALNSIRGSPRSSYALLTSFSIALIRENPGIHTTQEYDGEGRFKHYFMALAASIDAWNYYFPIMSV

Query:  DGATLKNKNMGILLSTYTLDGNSQIILLAYVIVD
        DGA +KNK +G L+S  T+D NSQI+  A+V+VD
Subjt:  DGATLKNKNMGILLSTYTLDGNSQIILLAYVIVD

A0A5D3E198 MuDRA-like transposase2.0e-4768.42Show/hide
Query:  NDKVSCRPCDVVSYMRRHHGVNVSYDKAWRDREIALNSIRGSPRSSYALLTSFSIALIRENPGIHTTQEYDGEGRFKHYFMALAASIDAWNYYFPIMSVD
        NDK  CRP DV++YM+ HHGVN+SYDKAWR REIALNSIRG+P  SYA+L++FS ALIR NPG +T +E D EGRFK YFMALAASIDAWNY  P++SVD
Subjt:  NDKVSCRPCDVVSYMRRHHGVNVSYDKAWRDREIALNSIRGSPRSSYALLTSFSIALIRENPGIHTTQEYDGEGRFKHYFMALAASIDAWNYYFPIMSVD

Query:  GATLKNKNMGILLSTYTLDGNSQIILLAYVIVD
        GA +KNK +G L+S  T+DGNSQI+ LA+ +VD
Subjt:  GATLKNKNMGILLSTYTLDGNSQIILLAYVIVD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATGACAAGGTGTCATGTCGTCCTTGTGATGTTGTTAGCTATATGAGAAGACATCATGGTGTAAATGTAAGTTATGACAAGGCTTGGAGAGACCGTGAAATTGCTCT
CAATTCCATCAGGGGTAGTCCTAGATCCTCATATGCTCTTTTGACGTCGTTCTCAATTGCCTTAATTAGAGAAAATCCTGGAATACATACAACACAAGAATATGATGGTG
AAGGTAGATTTAAGCATTATTTTATGGCCCTTGCTGCTTCCATAGATGCATGGAATTACTATTTTCCTATTATGTCTGTTGATGGTGCCACTCTAAAGAACAAAAATATG
GGGATTTTGTTATCTACTTACACTCTTGATGGTAATTCGCAAATTATACTTCTTGCATATGTCATTGTTGATTAG
mRNA sequenceShow/hide mRNA sequence
ATGAATGACAAGGTGTCATGTCGTCCTTGTGATGTTGTTAGCTATATGAGAAGACATCATGGTGTAAATGTAAGTTATGACAAGGCTTGGAGAGACCGTGAAATTGCTCT
CAATTCCATCAGGGGTAGTCCTAGATCCTCATATGCTCTTTTGACGTCGTTCTCAATTGCCTTAATTAGAGAAAATCCTGGAATACATACAACACAAGAATATGATGGTG
AAGGTAGATTTAAGCATTATTTTATGGCCCTTGCTGCTTCCATAGATGCATGGAATTACTATTTTCCTATTATGTCTGTTGATGGTGCCACTCTAAAGAACAAAAATATG
GGGATTTTGTTATCTACTTACACTCTTGATGGTAATTCGCAAATTATACTTCTTGCATATGTCATTGTTGATTAG
Protein sequenceShow/hide protein sequence
MNDKVSCRPCDVVSYMRRHHGVNVSYDKAWRDREIALNSIRGSPRSSYALLTSFSIALIRENPGIHTTQEYDGEGRFKHYFMALAASIDAWNYYFPIMSVDGATLKNKNM
GILLSTYTLDGNSQIILLAYVIVD