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ClCG05G013860 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG05G013860
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionMuDRA-like transposase
Genome locationCG_Chr05:21632704..21633290
RNA-Seq ExpressionClCG05G013860
SyntenyClCG05G013860
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_038888098.1 uncharacterized protein LOC120078004 [Benincasa hispida]1.9e-0538.55Show/hide
Query:  GVLKGIMVPITLRYQELKDWVYKIVRVDSSKFNIVMRC--KLDSYAPMVCLNKDEDIRFLLVKLNRNRPQIFVNVERKHHIEN
        G L GI+VPITL+Y+E K  +Y++  V+  +F++VMR   KLD  AP + +  D+D+   L   + +R Q++V + + +H EN
Subjt:  GVLKGIMVPITLRYQELKDWVYKIVRVDSSKFNIVMRC--KLDSYAPMVCLNKDEDIRFLLVKLNRNRPQIFVNVERKHHIEN
XP_038891938.1 uncharacterized protein LOC120081277 isoform X1 [Benincasa hispida]9.9e-0726.86Show/hide
Query:  KGVLKGIMVPITLRYQELKDWVYKIVRVDSSKFNIVMRC--KLDSYAPMVCLNKDEDIRFLLVKLNRNRPQIFVNVERKHHIENRTEQHTIGESDIFPFV
        +G L GI+VP++L+Y+E+K  +Y +  V SS+F+++++   KL+  AP   +  D+ IRFLL + + +R Q+ V ++      N  E   +G  ++    
Subjt:  KGVLKGIMVPITLRYQELKDWVYKIVRVDSSKFNIVMRC--KLDSYAPMVCLNKDEDIRFLLVKLNRNRPQIFVNVERKHHIENRTEQHTIGESDIFPFV

Query:  VSIGKDNTKSWDDTSITQHHSSQKRFLNSEVDV--STNNYLNWNGGDDWEKN---INEDVGCDPPVNESMSIVFD
                 S+DDT++ + +    ++   E D+  STN   +    D+   N   +N ++G    V   +  +FD
Subjt:  VSIGKDNTKSWDDTSITQHHSSQKRFLNSEVDV--STNNYLNWNGGDDWEKN---INEDVGCDPPVNESMSIVFD
XP_038891939.1 uncharacterized protein LOC120081277 isoform X2 [Benincasa hispida]9.9e-0726.86Show/hide
Query:  KGVLKGIMVPITLRYQELKDWVYKIVRVDSSKFNIVMRC--KLDSYAPMVCLNKDEDIRFLLVKLNRNRPQIFVNVERKHHIENRTEQHTIGESDIFPFV
        +G L GI+VP++L+Y+E+K  +Y +  V SS+F+++++   KL+  AP   +  D+ IRFLL + + +R Q+ V ++      N  E   +G  ++    
Subjt:  KGVLKGIMVPITLRYQELKDWVYKIVRVDSSKFNIVMRC--KLDSYAPMVCLNKDEDIRFLLVKLNRNRPQIFVNVERKHHIENRTEQHTIGESDIFPFV

Query:  VSIGKDNTKSWDDTSITQHHSSQKRFLNSEVDV--STNNYLNWNGGDDWEKN---INEDVGCDPPVNESMSIVFD
                 S+DDT++ + +    ++   E D+  STN   +    D+   N   +N ++G    V   +  +FD
Subjt:  VSIGKDNTKSWDDTSITQHHSSQKRFLNSEVDV--STNNYLNWNGGDDWEKN---INEDVGCDPPVNESMSIVFD
TrEMBL top hitse value%identityAlignment
A0A5A7UT04 MuDRA-like transposase4.9e-0433.75Show/hide
Query:  GVLKGIMVPITLRYQELKDWVYKIVRVDSSKFNIVMRC----KLDSYAPMVCLNKDEDIRFLLVKLNRNRPQIFVNVERK
        GVLKGI+V   + +++L+D +Y + +VD +KF+I +RC    K+++ AP   L+ D D++F ++  N     ++V+ E +
Subjt:  GVLKGIMVPITLRYQELKDWVYKIVRVDSSKFNIVMRC----KLDSYAPMVCLNKDEDIRFLLVKLNRNRPQIFVNVERK
A0A6J1DL08 uncharacterized protein LOC1110220714.9e-0432.93Show/hide
Query:  GVLKGIMVPITLRYQELKDWVYKIVRVDSSKFNIVMRC--KLDSYAPMVCLNKDEDIRFLLVKLNRNRPQIFVNVERKHHIE
        G LKGI+VP+T+ Y+ELK+ ++++++VD + +++V+R    L   +P + +  D+D+RF LV+   ++  +FV+   +  I+
Subjt:  GVLKGIMVPITLRYQELKDWVYKIVRVDSSKFNIVMRC--KLDSYAPMVCLNKDEDIRFLLVKLNRNRPQIFVNVERKHHIE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAGCAACTGTTTATTTGACATGGTGGGACATGGGATGATAGCAAACAAAGGAGTTTTAAAGGGCATCATGGTGCCAATCACATTGAGGTACCAAGAATTAAAGGA
CTGGGTATATAAAATAGTAAGGGTCGATTCATCAAAATTCAACATTGTAATGAGGTGTAAGTTGGACTCGTATGCACCTATGGTATGCCTAAACAAAGATGAGGACATTA
GATTTCTATTGGTAAAGTTGAATCGCAATAGACCTCAAATTTTTGTCAATGTTGAGAGGAAACATCATATAGAAAATCGAACAGAACAACACACTATTGGTGAATCTGAC
ATTTTTCCTTTCGTGGTCTCTATTGGAAAGGACAACACTAAGTCATGGGATGATACAAGTATTACACAACATCATTCTAGTCAGAAGAGGTTTCTTAATTCTGAAGTGGA
TGTATCCACAAACAATTATCTTAATTGGAATGGTGGAGATGATTGGGAGAAGAATATTAATGAGGATGTTGGGTGTGATCCTCCTGTAAATGAGTCTATGTCTATAGTGT
TTGATATGCATCCAAAACCA
mRNA sequenceShow/hide mRNA sequence
ATGGGAAGCAACTGTTTATTTGACATGGTGGGACATGGGATGATAGCAAACAAAGGAGTTTTAAAGGGCATCATGGTGCCAATCACATTGAGGTACCAAGAATTAAAGGA
CTGGGTATATAAAATAGTAAGGGTCGATTCATCAAAATTCAACATTGTAATGAGGTGTAAGTTGGACTCGTATGCACCTATGGTATGCCTAAACAAAGATGAGGACATTA
GATTTCTATTGGTAAAGTTGAATCGCAATAGACCTCAAATTTTTGTCAATGTTGAGAGGAAACATCATATAGAAAATCGAACAGAACAACACACTATTGGTGAATCTGAC
ATTTTTCCTTTCGTGGTCTCTATTGGAAAGGACAACACTAAGTCATGGGATGATACAAGTATTACACAACATCATTCTAGTCAGAAGAGGTTTCTTAATTCTGAAGTGGA
TGTATCCACAAACAATTATCTTAATTGGAATGGTGGAGATGATTGGGAGAAGAATATTAATGAGGATGTTGGGTGTGATCCTCCTGTAAATGAGTCTATGTCTATAGTGT
TTGATATGCATCCAAAACCA
Protein sequenceShow/hide protein sequence
MGSNCLFDMVGHGMIANKGVLKGIMVPITLRYQELKDWVYKIVRVDSSKFNIVMRCKLDSYAPMVCLNKDEDIRFLLVKLNRNRPQIFVNVERKHHIENRTEQHTIGESD
IFPFVVSIGKDNTKSWDDTSITQHHSSQKRFLNSEVDVSTNNYLNWNGGDDWEKNINEDVGCDPPVNESMSIVFDMHPKP