; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

ClCG05G013960 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG05G013960
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionC2H2-type domain-containing protein
Genome locationCG_Chr05:22256431..22256895
RNA-Seq ExpressionClCG05G013960
SyntenyClCG05G013960
Gene Ontology termsNA
InterPro domainsIPR013087 - Zinc finger C2H2-type
IPR036236 - Zinc finger C2H2 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6581122.1 Zinc finger protein KNUCKLES, partial [Cucurbita argyrosperma subsp. sororia]7.9e-5570.56Show/hide
Query:  MADPGIYDFLSQTTTPSNSSSKASRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSFQHSPPP--TMTHHHHHHLPT
        MADP IYDFL+QTTT SNS+ KASRK QSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAF SEILHLGS    PPP  T T   HHHLP 
Subjt:  MADPGIYDFLSQTTTPSNSSSKASRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSFQHSPPP--TMTHHHHHHLPT

Query:  QYAPAPPPTP---------PA-FLDDHWFHQNHFCANTTTT--------------ASPDALSPNTDAAVEHVTIDLTLRL
         Y  AP PTP         PA FL  HWF+QNH+ ANTTTT              ASPDALSPN D AVEHVTIDLTLRL
Subjt:  QYAPAPPPTP---------PA-FLDDHWFHQNHFCANTTTT--------------ASPDALSPNTDAAVEHVTIDLTLRL

KAG7017856.1 Zinc finger protein KNUCKLES, partial [Cucurbita argyrosperma subsp. argyrosperma]2.1e-5572.57Show/hide
Query:  MADPGIYDFLSQTTTPSNSSSKASRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSFQHSPPP--TMTHHHHHHLPT
        MADP IYDFL+QTTT SNS+ KASRK QSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAF SEILHLGS    PPP  T T   HHHLP 
Subjt:  MADPGIYDFLSQTTTPSNSSSKASRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSFQHSPPP--TMTHHHHHHLPT

Query:  QYAPAPPPTP---------PA-FLDDHWFHQNHFCANTTTT---------ASPDALSPNTDAAVEHVTIDLTLRL
         Y  AP PTP         PA FL  HWF+QNH+ ANTTTT         ASPDALSPN D AVEHVTIDLTLRL
Subjt:  QYAPAPPPTP---------PA-FLDDHWFHQNHFCANTTTT---------ASPDALSPNTDAAVEHVTIDLTLRL

XP_022934585.1 protein LATE FLOWERING-like [Cucurbita moschata]1.1e-5676.51Show/hide
Query:  MADPGIYDFLSQTTTPSNSSSKASRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSFQHSPPPTMTHHHHHHLPTQY
        MADP IYDFL+QTTT SNS+ KASRK QSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAF SEILHLGS    PPPT T   HHHLP  Y
Subjt:  MADPGIYDFLSQTTTPSNSSSKASRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSFQHSPPPTMTHHHHHHLPTQY

Query:  APAPPPTP-----PA-FLDDHWFHQNHFCANTTTT------ASPDALSPNTDAAVEHVTIDLTLRL
          AP PTP     PA FL  HWF+QNH+ ANTTTT      ASPDALSPN D AVEHVTIDLTLRL
Subjt:  APAPPPTP-----PA-FLDDHWFHQNHFCANTTTT------ASPDALSPNTDAAVEHVTIDLTLRL

XP_022983390.1 protein LATE FLOWERING-like [Cucurbita maxima]3.2e-5678.05Show/hide
Query:  MADPGIYDFLSQTTTPSNSSSKASRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSFQHSPPPTMTHHHHHHLPTQY
        MADP IYDFL+QTTT SNS+ KASRK QSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAF SEILHLGS    P PT T   HHHLP  Y
Subjt:  MADPGIYDFLSQTTTPSNSSSKASRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSFQHSPPPTMTHHHHHHLPTQY

Query:  --APAPPPTP-PA-FLDDHWFHQNHFCANTTTT------ASPDALSPNTDAAVEHVTIDLTLRL
          APAP PTP PA FL  HWF+QNH+ ANTTTT      ASPDALSPN D AVEHVTIDLTLRL
Subjt:  --APAPPPTP-PA-FLDDHWFHQNHFCANTTTT------ASPDALSPNTDAAVEHVTIDLTLRL

XP_023529006.1 protein LATE FLOWERING-like [Cucurbita pepo subsp. pepo]5.5e-5673.53Show/hide
Query:  MADPGIYDFLSQTTTPSNSSSKASRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSFQHSPPPTMTHHHHHHLPTQY
        MADP IYDFL+QTTT SNS++KASRK QSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAF SEILHLGS    PPP  T HHH   P   
Subjt:  MADPGIYDFLSQTTTPSNSSSKASRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSFQHSPPPTMTHHHHHHLPTQY

Query:  APAPPPTP-------PA-FLDDHWFHQNHFCANTTTT--------ASPDALSPNTDAAVEHVTIDLTLRL
         PAP PTP       PA FL  HWF+QNH+ ANTTTT        ASPDALSPN D AVEHVTIDLTLRL
Subjt:  APAPPPTP-------PA-FLDDHWFHQNHFCANTTTT--------ASPDALSPNTDAAVEHVTIDLTLRL

TrEMBL top hitse value%identityAlignment
A0A0A0LDF1 C2H2-type domain-containing protein2.0e-4366.47Show/hide
Query:  MADPGIYDFLSQTTT--PSNSSSKASR--KSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRER-AASRKA---FTSEILHLG--SFQHS---PPPT
        MADP IYDFLSQTTT  PSN+S+   +   S+  +S SRIFPCLYCPRKFYTSQALGGHQNAHKRER AASRKA    T+EILHLG  S QHS   PPPT
Subjt:  MADPGIYDFLSQTTT--PSNSSSKASR--KSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRER-AASRKA---FTSEILHLG--SFQHS---PPPT

Query:  MTHHHHHHLPTQYAPAPPPTPPAFLDDHW-FHQNHFCANTTTTASPDALSP--NTDAAVEHVTIDLTLRL
           HHHHHLP  + P   PTPP+FLD H  FH N+FC N  T+ASPD LSP  +TD A+EH+ IDLTLRL
Subjt:  MTHHHHHHLPTQYAPAPPPTPPAFLDDHW-FHQNHFCANTTTTASPDALSP--NTDAAVEHVTIDLTLRL

A0A6J1EJQ6 protein LATE FLOWERING-like5.7e-5173.42Show/hide
Query:  MADPGIYDFLSQTTTPSNSSSKASRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSFQHS--PPPTMTHHHHHHLPT
        MADP IYDFLSQTT  ++     SRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGS QHS  PPP  T +HH   P+
Subjt:  MADPGIYDFLSQTTTPSNSSSKASRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSFQHS--PPPTMTHHHHHHLPT

Query:  QYAPAPPPTPPAFLDDHWFHQNHFCANTTTT--ASPDALSPNTDAAVEHVTIDLTLRL
          A A    P A  D+HWFHQN+    TTTT  ASP+ LSPN DAAVEHVTIDLTLRL
Subjt:  QYAPAPPPTPPAFLDDHWFHQNHFCANTTTT--ASPDALSPNTDAAVEHVTIDLTLRL

A0A6J1F843 protein LATE FLOWERING-like5.3e-5776.51Show/hide
Query:  MADPGIYDFLSQTTTPSNSSSKASRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSFQHSPPPTMTHHHHHHLPTQY
        MADP IYDFL+QTTT SNS+ KASRK QSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAF SEILHLGS    PPPT T   HHHLP  Y
Subjt:  MADPGIYDFLSQTTTPSNSSSKASRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSFQHSPPPTMTHHHHHHLPTQY

Query:  APAPPPTP-----PA-FLDDHWFHQNHFCANTTTT------ASPDALSPNTDAAVEHVTIDLTLRL
          AP PTP     PA FL  HWF+QNH+ ANTTTT      ASPDALSPN D AVEHVTIDLTLRL
Subjt:  APAPPPTP-----PA-FLDDHWFHQNHFCANTTTT------ASPDALSPNTDAAVEHVTIDLTLRL

A0A6J1J5R2 protein LATE FLOWERING-like1.5e-5678.05Show/hide
Query:  MADPGIYDFLSQTTTPSNSSSKASRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSFQHSPPPTMTHHHHHHLPTQY
        MADP IYDFL+QTTT SNS+ KASRK QSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAF SEILHLGS    P PT T   HHHLP  Y
Subjt:  MADPGIYDFLSQTTTPSNSSSKASRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSFQHSPPPTMTHHHHHHLPTQY

Query:  --APAPPPTP-PA-FLDDHWFHQNHFCANTTTT------ASPDALSPNTDAAVEHVTIDLTLRL
          APAP PTP PA FL  HWF+QNH+ ANTTTT      ASPDALSPN D AVEHVTIDLTLRL
Subjt:  --APAPPPTP-PA-FLDDHWFHQNHFCANTTTT------ASPDALSPNTDAAVEHVTIDLTLRL

A0A6J1JQI7 protein LATE FLOWERING-like2.8e-5071.88Show/hide
Query:  MADPGIYDFLSQTTTPSNSSSKASRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSFQHS--PPPTMTHHHHHHLPT
        MADP IYDFLSQTT  ++     SRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRK FTSEILHLGS QHS  PPP  T +HH   P+
Subjt:  MADPGIYDFLSQTTTPSNSSSKASRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSFQHS--PPPTMTHHHHHHLPT

Query:  QYAPAPPPTPPAFLDDHWFHQNHFCANTTTT----ASPDALSPNTDAAVEHVTIDLTLRL
          A A    P A  D+HWFHQN+    TTTT    ASP+ LSPN DAAVEHVTIDLTLRL
Subjt:  QYAPAPPPTPPAFLDDHWFHQNHFCANTTTT----ASPDALSPNTDAAVEHVTIDLTLRL

SwissProt top hitse value%identityAlignment
Q39261 Zinc finger protein 26.8e-0957.69Show/hide
Query:  NSSSKASRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKA
        +SSS +S  S S     R+F C YC RKFY+SQALGGHQNAHK ER  ++K+
Subjt:  NSSSKASRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKA

Q39263 Zinc finger protein 48.0e-1053.97Show/hide
Query:  SQTTTPSNSSSKASRKSQSQYS----SSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKA
        S  T P +S+S++S   Q Q      S R+F C YC RKFY+SQALGGHQNAHKRER  +++A
Subjt:  SQTTTPSNSSSKASRKSQSQYS----SSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKA

Q42485 Zinc finger protein 14.0e-0955.77Show/hide
Query:  SNSSSKASRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRK
        S+SS+   +  Q Q +  R+F C YC RKFY+SQALGGHQNAHKRER  +++
Subjt:  SNSSSKASRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRK

Q9FFX4 Zinc finger protein KNUCKLES3.5e-1353.66Show/hide
Query:  PGIYDFLSQTTTPSNSSSKASRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSFQHSPP
        P    F+    T S SS + S  S +  +S R+FPC YCPRKFYTSQALGGHQNAHKRERAA+R+       +LG   +SPP
Subjt:  PGIYDFLSQTTTPSNSSSKASRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSFQHSPP

Q9FKA9 Protein LATE FLOWERING2.9e-1247.62Show/hide
Query:  SKASRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTS-EILHLGSFQHSPPPTMTHHHHHHLPTQYAPA
        SK + K+    SS RIFPCL+C RKF++SQALGGHQNAHK+ER A+R+A  + + ++   F H+ P  ++    HHL     PA
Subjt:  SKASRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTS-EILHLGSFQHSPPPTMTHHHHHHLPTQYAPA

Arabidopsis top hitse value%identityAlignment
AT1G66140.1 zinc finger protein 45.7e-1153.97Show/hide
Query:  SQTTTPSNSSSKASRKSQSQYS----SSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKA
        S  T P +S+S++S   Q Q      S R+F C YC RKFY+SQALGGHQNAHKRER  +++A
Subjt:  SQTTTPSNSSSKASRKSQSQYS----SSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKA

AT1G80730.1 zinc-finger protein 12.8e-1055.77Show/hide
Query:  SNSSSKASRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRK
        S+SS+   +  Q Q +  R+F C YC RKFY+SQALGGHQNAHKRER  +++
Subjt:  SNSSSKASRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRK

AT5G14010.1 C2H2 and C2HC zinc fingers superfamily protein2.5e-1453.66Show/hide
Query:  PGIYDFLSQTTTPSNSSSKASRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSFQHSPP
        P    F+    T S SS + S  S +  +S R+FPC YCPRKFYTSQALGGHQNAHKRERAA+R+       +LG   +SPP
Subjt:  PGIYDFLSQTTTPSNSSSKASRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSFQHSPP

AT5G48890.1 C2H2-like zinc finger protein2.1e-1347.62Show/hide
Query:  SKASRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTS-EILHLGSFQHSPPPTMTHHHHHHLPTQYAPA
        SK + K+    SS RIFPCL+C RKF++SQALGGHQNAHK+ER A+R+A  + + ++   F H+ P  ++    HHL     PA
Subjt:  SKASRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTS-EILHLGSFQHSPPPTMTHHHHHHLPTQYAPA

AT5G57520.1 zinc finger protein 24.8e-1057.69Show/hide
Query:  NSSSKASRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKA
        +SSS +S  S S     R+F C YC RKFY+SQALGGHQNAHK ER  ++K+
Subjt:  NSSSKASRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGACCCAGGCATTTACGACTTCCTTAGCCAAACAACCACTCCTTCTAATTCTTCATCCAAAGCTTCCAGAAAATCTCAGTCCCAATACTCTTCCTCTCGCATTTT
TCCATGTCTTTACTGCCCTCGCAAATTTTATACTTCTCAAGCCCTAGGCGGCCACCAAAATGCTCACAAGAGAGAAAGAGCCGCCTCTCGAAAGGCTTTCACCTCTGAAA
TTCTTCATCTCGGTTCCTTTCAACACTCGCCGCCGCCGACCATGACTCATCATCATCATCATCATCTTCCTACGCAGTATGCGCCAGCTCCGCCTCCGACTCCACCTGCT
TTTCTCGACGACCATTGGTTTCATCAGAATCATTTCTGTGCTAACACCACCACCACCGCCTCGCCGGATGCTCTCTCTCCCAACACTGATGCCGCCGTTGAACATGTAAC
CATCGATCTCACTCTTCGTTTATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGACCCAGGCATTTACGACTTCCTTAGCCAAACAACCACTCCTTCTAATTCTTCATCCAAAGCTTCCAGAAAATCTCAGTCCCAATACTCTTCCTCTCGCATTTT
TCCATGTCTTTACTGCCCTCGCAAATTTTATACTTCTCAAGCCCTAGGCGGCCACCAAAATGCTCACAAGAGAGAAAGAGCCGCCTCTCGAAAGGCTTTCACCTCTGAAA
TTCTTCATCTCGGTTCCTTTCAACACTCGCCGCCGCCGACCATGACTCATCATCATCATCATCATCTTCCTACGCAGTATGCGCCAGCTCCGCCTCCGACTCCACCTGCT
TTTCTCGACGACCATTGGTTTCATCAGAATCATTTCTGTGCTAACACCACCACCACCGCCTCGCCGGATGCTCTCTCTCCCAACACTGATGCCGCCGTTGAACATGTAAC
CATCGATCTCACTCTTCGTTTATAA
Protein sequenceShow/hide protein sequence
MADPGIYDFLSQTTTPSNSSSKASRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSFQHSPPPTMTHHHHHHLPTQYAPAPPPTPPA
FLDDHWFHQNHFCANTTTTASPDALSPNTDAAVEHVTIDLTLRL