CuGenDBv2

Gene ID	ClCG05G014230
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	Zinc finger BED domain-containing protein RICESLEEPER 2-like
Genome location	CG_Chr05:23366481..23369237
RNA-Seq Expression	ClCG05G014230
Synteny	ClCG05G014230
Gene Ontology terms	GO:0009791 - post-embryonic development (biological process) GO:0005634 - nucleus (cellular component) GO:0003677 - DNA binding (molecular function) GO:0046872 - metal ion binding (molecular function) GO:0046983 - protein dimerization activity (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0053413.1 zinc finger BED domain-containing protein RICESLEEPER 2-like [Cucumis melo var. makuwa]

1.5e-14

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Query:  LPPLPPNVSQTTRHIPSLPPKSNRKRPNKPTSSVWDHFTKIEVIANDEIGAKRKCNYCEK
        LPP PPN S+TT+H+P LPPKS RKRPNK TSSVWDHF K+E  A D  GA+ KCNYC K
Subjt:  LPPLPPNVSQTTRHIPSLPPKSNRKRPNKPTSSVWDHFTKIEVIANDEIGAKRKCNYCEK

KAA0056011.1 zinc finger BED domain-containing protein RICESLEEPER 2-like [Cucumis melo var. makuwa]

1.4e-15

73.33

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Query:  LPPLPPNVSQTTRHIPSLPPKSNRKRPNKPTSSVWDHFTKIEVIANDEIGAKRKCNYCEK
        LPP PPN SQTT+H+P LPPKS RKRPNK TSSVWDHFTK+E  A D  GA+ KCNYC K
Subjt:  LPPLPPNVSQTTRHIPSLPPKSNRKRPNKPTSSVWDHFTKIEVIANDEIGAKRKCNYCEK

KAA0056523.1 zinc finger BED domain-containing protein RICESLEEPER 2-like [Cucumis melo var. makuwa]

4.0e-15

75.44

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Query:  LPPLPPNVSQTTRHIPSLPPKSNRKRPNKPTSSVWDHFTKIEVIANDEIGAKRKCNY
        +PP PPN+SQTT+H+P LPPKS RKRPNK TSSVWDHFTK+E  AND  GAK KCNY
Subjt:  LPPLPPNVSQTTRHIPSLPPKSNRKRPNKPTSSVWDHFTKIEVIANDEIGAKRKCNY

TYK15892.1 zinc finger BED domain-containing protein RICESLEEPER 2-like [Cucumis melo var. makuwa]

1.4e-15

73.33

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Query:  LPPLPPNVSQTTRHIPSLPPKSNRKRPNKPTSSVWDHFTKIEVIANDEIGAKRKCNYCEK
        LPP PPN SQTT+H+P LPPKS RKRPNK TSSVWDHFTK+E  A D  GA+ KCNYC K
Subjt:  LPPLPPNVSQTTRHIPSLPPKSNRKRPNKPTSSVWDHFTKIEVIANDEIGAKRKCNYCEK

TYK26463.1 zinc finger BED domain-containing protein RICESLEEPER 2-like [Cucumis melo var. makuwa]

1.4e-15

73.33

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Query:  LPPLPPNVSQTTRHIPSLPPKSNRKRPNKPTSSVWDHFTKIEVIANDEIGAKRKCNYCEK
        LPP PPN SQTT+H+P LPPKS RKRPNK TSSVWDHFTK+E  A D  GA+ KCNYC K
Subjt:  LPPLPPNVSQTTRHIPSLPPKSNRKRPNKPTSSVWDHFTKIEVIANDEIGAKRKCNYCEK

TrEMBL top hits

e value

%identity

Alignment

A0A5A7UBZ7 Zinc finger BED domain-containing protein RICESLEEPER 2-like

7.4e-15

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Query:  LPPLPPNVSQTTRHIPSLPPKSNRKRPNKPTSSVWDHFTKIEVIANDEIGAKRKCNYCEK
        LPP PPN S+TT+H+P LPPKS RKRPNK TSSVWDHF K+E  A D  GA+ KCNYC K
Subjt:  LPPLPPNVSQTTRHIPSLPPKSNRKRPNKPTSSVWDHFTKIEVIANDEIGAKRKCNYCEK

A0A5A7UKW0 Zinc finger BED domain-containing protein RICESLEEPER 2-like

1.9e-15

75.44

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Query:  LPPLPPNVSQTTRHIPSLPPKSNRKRPNKPTSSVWDHFTKIEVIANDEIGAKRKCNY
        +PP PPN+SQTT+H+P LPPKS RKRPNK TSSVWDHFTK+E  AND  GAK KCNY
Subjt:  LPPLPPNVSQTTRHIPSLPPKSNRKRPNKPTSSVWDHFTKIEVIANDEIGAKRKCNY

A0A5A7UR09 Zinc finger BED domain-containing protein RICESLEEPER 2-like

6.6e-16

73.33

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Query:  LPPLPPNVSQTTRHIPSLPPKSNRKRPNKPTSSVWDHFTKIEVIANDEIGAKRKCNYCEK
        LPP PPN SQTT+H+P LPPKS RKRPNK TSSVWDHFTK+E  A D  GA+ KCNYC K
Subjt:  LPPLPPNVSQTTRHIPSLPPKSNRKRPNKPTSSVWDHFTKIEVIANDEIGAKRKCNYCEK

A0A5D3CWJ0 Zinc finger BED domain-containing protein RICESLEEPER 2-like

6.6e-16

73.33

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Query:  LPPLPPNVSQTTRHIPSLPPKSNRKRPNKPTSSVWDHFTKIEVIANDEIGAKRKCNYCEK
        LPP PPN SQTT+H+P LPPKS RKRPNK TSSVWDHFTK+E  A D  GA+ KCNYC K
Subjt:  LPPLPPNVSQTTRHIPSLPPKSNRKRPNKPTSSVWDHFTKIEVIANDEIGAKRKCNYCEK

A0A5D3DSA5 Zinc finger BED domain-containing protein RICESLEEPER 2-like

6.6e-16

73.33

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Query:  LPPLPPNVSQTTRHIPSLPPKSNRKRPNKPTSSVWDHFTKIEVIANDEIGAKRKCNYCEK
        LPP PPN SQTT+H+P LPPKS RKRPNK TSSVWDHFTK+E  A D  GA+ KCNYC K
Subjt:  LPPLPPNVSQTTRHIPSLPPKSNRKRPNKPTSSVWDHFTKIEVIANDEIGAKRKCNYCEK

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

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CDS sequence

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ATGTTCCGTCGATATATCCACACACTCTCCAGTGATCTCTCAATCTTCCATCAATCTCTCAATCCGTCGTCCGTTGATTTCTCCATCCTCAGGCCGGTCCTCAATCCTTC
GTCCGTCGATCTCTCCATTCTAAACTATCCACTCGTCGATCTCCCAGTCCTCCATCCTCAGTCGTTCGTTGATCTCTCAATCCTCCGTCCTCAGTTGTCTGTAGGTGTAA
GTTGGTTGTTATTACCTCCTCTTCCTCCAAATGTTAGTCAAACTACTAGACATATACCGTCTTTACCTCCCAAGTCCAATCGAAAGAGACCTAATAAACCAACTTCTTCG
GTGTGGGATCATTTCACAAAAATAGAAGTGATTGCTAACGATGAAATTGGAGCTAAGCGCAAGTGTAACTATTGTGAAAAATGGCTAAGTATCAGCTATGCGTTGGTGGC
AACGCGCCTTGATGGAAGTAGTTTTGGCGTGGACGCAAAGGTCACAAGGCGTGGAGAGCCACCCTGCATCGAAGGTTATCTTGCGACAAACGCATTGAAGGCTGCAAGGC
GTTGGAAGTTGAAGGCCACGAGGCTTTTGAAAAGTAACACCATCAGAGGCCGTGTGTTGCTGAAGCTAAACATAGAAGCTAAACATCGGAGGGAGGTAGAAGGAGATGTT
CATGTCGATTTGGAGACTCAGCTGGTGTTACTCTCTCAGAGTAACGTTTGGTTTTGGAGGAAGAACGAACTGAAGAAACGGTGGTTAGGGCCAGAACTTCTGAGATTAGA
GCAACTTGGAGTTGTTGAAGGATATGCCCTAAACGGAAAGGATATTCTTCATGAAATTTTGAGCAAGTTGAAGAAGGAAGAGGAAAGGAAAAAGAAATTTGCTCTGCTGC
AGCGTCTCGCCGAGTGTCGCTCCTCAGGTAGTCTCGCTAGTTGCGTTCAACTTAGTATCGCTGGTACAGTAAAGTATAACGCTATTAATGTGTGTTGCGGGAAAAGGAAG
ATTATGGAAACTAAACATGAGAAATATGTATTTTCAGGCCAGGAAGAGCTCGGGGAGGCTTATAATCCACTTAGAGCCGAGACAAGTTCGAAGAATGAATTGGTTACCAG
TGCTGAGGGACTTCGTGTGAAGGCACATGGTAATGTAGACATAATCGAATAA

mRNA sequence

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Protein sequence

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MFRRYIHTLSSDLSIFHQSLNPSSVDFSILRPVLNPSSVDLSILNYPLVDLPVLHPQSFVDLSILRPQLSVGVSWLLLPPLPPNVSQTTRHIPSLPPKSNRKRPNKPTSS
VWDHFTKIEVIANDEIGAKRKCNYCEKWLSISYALVATRLDGSSFGVDAKVTRRGEPPCIEGYLATNALKAARRWKLKATRLLKSNTIRGRVLLKLNIEAKHRREVEGDV
HVDLETQLVLLSQSNVWFWRKNELKKRWLGPELLRLEQLGVVEGYALNGKDILHEILSKLKKEEERKKKFALLQRLAECRSSGSLASCVQLSIAGTVKYNAINVCCGKRK
IMETKHEKYVFSGQEELGEAYNPLRAETSSKNELVTSAEGLRVKAHGNVDIIE

ClCG05G014230 (gene) of Watermelon (Charleston Gray) v2.5 genome