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ClCG05G014280 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG05G014280
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptiontRNA-uridine aminocarboxypropyltransferase
Genome locationCG_Chr05:23615967..23616344
RNA-Seq ExpressionClCG05G014280
SyntenyClCG05G014280
Gene Ontology termsGO:0008033 - tRNA processing (biological process)
GO:0016432 - tRNA-uridine aminocarboxypropyltransferase activity (molecular function)
InterPro domainsIPR005636 - DTW
IPR039262 - DTW domain-containing protein DTWD2/YfiP


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7024915.1 hypothetical protein SDJN02_13735, partial [Cucurbita argyrosperma subsp. argyrosperma]4.0e-2532.56Show/hide
Query:  MVDFPRSFKRPVCPSYSKPTRICPCSRLQSPSLENSIEVIFLQHSLEKKHPLNS----------------------------------------------
        M D P S  R VCPS SKP RIC CSRLQ+PSLENS+ VI LQHSLEKKHPLNS                                              
Subjt:  MVDFPRSFKRPVCPSYSKPTRICPCSRLQSPSLENSIEVIFLQHSLEKKHPLNS----------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------VNNLIVLNGTWAKAKRIYKENPWLRILPHMKLDLKNMSLFSEVRHQPKFGFFSTI-----ALKVIKDHPEGL
                                    VNNLIVL+GTWAKAKR+Y ENPWLR+LPHMKLDL+ MSL+SEVR QPK GF STI     ALKVI DHPEGL
Subjt:  ----------------------------VNNLIVLNGTWAKAKRIYKENPWLRILPHMKLDLKNMSLFSEVRHQPKFGFFSTI-----ALKVIKDHPEGL

Query:  D
        D
Subjt:  D

XP_009607395.1 DTW domain-containing protein 2 [Nicotiana tomentosiformis]2.1e-2638.05Show/hide
Query:  KRPVCPSYSKPTRICPCSRLQSPSLENSIEVIFLQHSLEKKHPLNS------------------------------------------------------
        KRP+CPS SKP R+C C+RL++P L+NS+ V  LQHSLEKKHPLNS                                                      
Subjt:  KRPVCPSYSKPTRICPCSRLQSPSLENSIEVIFLQHSLEKKHPLNS------------------------------------------------------

Query:  -------------------------------VNNLIVLNGTWAKAKRIYKENPWLRILPHMKLDLKNMSLFSEVRHQPKFGFFSTI-----ALKVI-KDH
                                       V NLIVL+GTWAKAKR+Y ENPWL++LPH+KLD++ +SL+SEVRHQP+ G+ STI     ALK + ++ 
Subjt:  -------------------------------VNNLIVLNGTWAKAKRIYKENPWLRILPHMKLDLKNMSLFSEVRHQPKFGFFSTI-----ALKVI-KDH

Query:  PEGLD
         EGLD
Subjt:  PEGLD

XP_016514285.1 PREDICTED: DTW domain-containing protein 2-like [Nicotiana tabacum]2.1e-2638.05Show/hide
Query:  KRPVCPSYSKPTRICPCSRLQSPSLENSIEVIFLQHSLEKKHPLNS------------------------------------------------------
        KRP+CPS SKP R+C C+RL++P L+NS+ V  LQHSLEKKHPLNS                                                      
Subjt:  KRPVCPSYSKPTRICPCSRLQSPSLENSIEVIFLQHSLEKKHPLNS------------------------------------------------------

Query:  -------------------------------VNNLIVLNGTWAKAKRIYKENPWLRILPHMKLDLKNMSLFSEVRHQPKFGFFSTI-----ALKVI-KDH
                                       V NLIVL+GTWAKAKR+Y ENPWL++LPH+KLD++ +SL+SEVRHQP+ G+ STI     ALK + ++ 
Subjt:  -------------------------------VNNLIVLNGTWAKAKRIYKENPWLRILPHMKLDLKNMSLFSEVRHQPKFGFFSTI-----ALKVI-KDH

Query:  PEGLD
         EGLD
Subjt:  PEGLD

XP_022976533.1 uncharacterized protein LOC111476900 isoform X1 [Cucurbita maxima]1.8e-2532.89Show/hide
Query:  MVDFPRSFKRPVCPSYSKPTRICPCSRLQSPSLENSIEVIFLQHSLEKKHPLNS----------------------------------------------
        M D P S  R VCPS SKP RIC CSRLQSPSLENS+ VI LQHSLEKKHPLNS                                              
Subjt:  MVDFPRSFKRPVCPSYSKPTRICPCSRLQSPSLENSIEVIFLQHSLEKKHPLNS----------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------VNNLIVLNGTWAKAKRIYKENPWLRILPHMKLDLKNMSLFSEVRHQPKFGFFSTI-----ALKVIKDHPEGL
                                    VNNLIVL+GTWAKAKR+Y ENPWLR+LPHMKLDL+ MSL+SEVR QPK GF STI     ALKVI DHPEGL
Subjt:  ----------------------------VNNLIVLNGTWAKAKRIYKENPWLRILPHMKLDLKNMSLFSEVRHQPKFGFFSTI-----ALKVIKDHPEGL

Query:  D
        D
Subjt:  D

XP_023535710.1 uncharacterized protein LOC111797060 isoform X1 [Cucurbita pepo subsp. pepo]4.0e-2532.56Show/hide
Query:  MVDFPRSFKRPVCPSYSKPTRICPCSRLQSPSLENSIEVIFLQHSLEKKHPLNS----------------------------------------------
        M D P S  R VCPS SKP RIC CSRLQ+PSLENS+ VI LQHSLEKKHPLNS                                              
Subjt:  MVDFPRSFKRPVCPSYSKPTRICPCSRLQSPSLENSIEVIFLQHSLEKKHPLNS----------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------VNNLIVLNGTWAKAKRIYKENPWLRILPHMKLDLKNMSLFSEVRHQPKFGFFSTI-----ALKVIKDHPEGL
                                    VNNLIVL+GTWAKAKR+Y ENPWLR+LPHMKLDL+ MSL+SEVR QPK GF STI     ALKVI DHPEGL
Subjt:  ----------------------------VNNLIVLNGTWAKAKRIYKENPWLRILPHMKLDLKNMSLFSEVRHQPKFGFFSTI-----ALKVIKDHPEGL

Query:  D
        D
Subjt:  D

TrEMBL top hitse value%identityAlignment
A0A0A0LD09 tRNA-uridine aminocarboxypropyltransferase1.4e-2330.69Show/hide
Query:  MVDFPRSFKRPVCPSYSKPTRICPCSRLQSPSLENSIEVIFLQHSLEKKHPLNS----------------------------------------------
        M D   S +RPVCPS SKP RIC CSR +S S+ENS+ VI LQHSLEK HPLNS                                              
Subjt:  MVDFPRSFKRPVCPSYSKPTRICPCSRLQSPSLENSIEVIFLQHSLEKKHPLNS----------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ------------------------------VNNLIVLNGTWAKAKRIYKENPWLRILPHMKLDLKNMSLFSEVRHQPKFGFFSTI-----ALKVIKDHPE
                                      +NNLIVL+GTWAKAKR+Y ENPWLR+LPHMKLDL+ MSL+SEVRHQPK GF STI     ALK+I DHPE
Subjt:  ------------------------------VNNLIVLNGTWAKAKRIYKENPWLRILPHMKLDLKNMSLFSEVRHQPKFGFFSTI-----ALKVIKDHPE

Query:  GLD
        GLD
Subjt:  GLD

A0A1S4DLJ3 tRNA-uridine aminocarboxypropyltransferase1.0e-2638.05Show/hide
Query:  KRPVCPSYSKPTRICPCSRLQSPSLENSIEVIFLQHSLEKKHPLNS------------------------------------------------------
        KRP+CPS SKP R+C C+RL++P L+NS+ V  LQHSLEKKHPLNS                                                      
Subjt:  KRPVCPSYSKPTRICPCSRLQSPSLENSIEVIFLQHSLEKKHPLNS------------------------------------------------------

Query:  -------------------------------VNNLIVLNGTWAKAKRIYKENPWLRILPHMKLDLKNMSLFSEVRHQPKFGFFSTI-----ALKVI-KDH
                                       V NLIVL+GTWAKAKR+Y ENPWL++LPH+KLD++ +SL+SEVRHQP+ G+ STI     ALK + ++ 
Subjt:  -------------------------------VNNLIVLNGTWAKAKRIYKENPWLRILPHMKLDLKNMSLFSEVRHQPKFGFFSTI-----ALKVI-KDH

Query:  PEGLD
         EGLD
Subjt:  PEGLD

A0A5A7T5E2 tRNA-uridine aminocarboxypropyltransferase1.4e-2330.36Show/hide
Query:  MVDFPRSFKRPVCPSYSKPTRICPCSRLQSPSLENSIEVIFLQHSLEKKHPLNS----------------------------------------------
        M D   S +RPVCPS SKP RIC CSR +SPSLENS+ +I LQHS EK HPLNS                                              
Subjt:  MVDFPRSFKRPVCPSYSKPTRICPCSRLQSPSLENSIEVIFLQHSLEKKHPLNS----------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ------------------------------VNNLIVLNGTWAKAKRIYKENPWLRILPHMKLDLKNMSLFSEVRHQPKFGFFSTI-----ALKVIKDHPE
                                      +N+LIVL+GTWAKAKR+Y ENPWLR+LPHMKLDL+ MSL+SEVRHQPK GF STI     ALK+I DHPE
Subjt:  ------------------------------VNNLIVLNGTWAKAKRIYKENPWLRILPHMKLDLKNMSLFSEVRHQPKFGFFSTI-----ALKVIKDHPE

Query:  GLD
        GLD
Subjt:  GLD

A0A6J1FCX1 tRNA-uridine aminocarboxypropyltransferase7.4e-2532.23Show/hide
Query:  MVDFPRSFKRPVCPSYSKPTRICPCSRLQSPSLENSIEVIFLQHSLEKKHPLNS----------------------------------------------
        M D P S  R VCPS SKP RIC CSRL +PSLENS+ VI LQHSLEKKHPLNS                                              
Subjt:  MVDFPRSFKRPVCPSYSKPTRICPCSRLQSPSLENSIEVIFLQHSLEKKHPLNS----------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------VNNLIVLNGTWAKAKRIYKENPWLRILPHMKLDLKNMSLFSEVRHQPKFGFFSTI-----ALKVIKDHPEGL
                                    VNNLIVL+GTWAKAKR+Y ENPWLR+LPHMKLDL+ MSL+SEVR QPK GF STI     ALKVI DHPEGL
Subjt:  ----------------------------VNNLIVLNGTWAKAKRIYKENPWLRILPHMKLDLKNMSLFSEVRHQPKFGFFSTI-----ALKVIKDHPEGL

Query:  D
        D
Subjt:  D

A0A6J1IMF8 tRNA-uridine aminocarboxypropyltransferase8.8e-2632.89Show/hide
Query:  MVDFPRSFKRPVCPSYSKPTRICPCSRLQSPSLENSIEVIFLQHSLEKKHPLNS----------------------------------------------
        M D P S  R VCPS SKP RIC CSRLQSPSLENS+ VI LQHSLEKKHPLNS                                              
Subjt:  MVDFPRSFKRPVCPSYSKPTRICPCSRLQSPSLENSIEVIFLQHSLEKKHPLNS----------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------VNNLIVLNGTWAKAKRIYKENPWLRILPHMKLDLKNMSLFSEVRHQPKFGFFSTI-----ALKVIKDHPEGL
                                    VNNLIVL+GTWAKAKR+Y ENPWLR+LPHMKLDL+ MSL+SEVR QPK GF STI     ALKVI DHPEGL
Subjt:  ----------------------------VNNLIVLNGTWAKAKRIYKENPWLRILPHMKLDLKNMSLFSEVRHQPKFGFFSTI-----ALKVIKDHPEGL

Query:  D
        D
Subjt:  D

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G54880.1 DTW domain-containing protein1.3e-1848.15Show/hide
Query:  PCSRLQSPSLENSIEVIFLQHSLEKKHPLNSVNNLIVLNGTWAKAKRIYKENPWLRILP-HMKLDLKNMSLFSEVRHQPKFGFFSTI-----ALKVIKDH
        P S L  PS E S+++ +L+   E K     V NLIVL+GTW+KA+RIY ENPWL++L  H+KL+++  SL+ EVR QP+ G  STI     A+K I + 
Subjt:  PCSRLQSPSLENSIEVIFLQHSLEKKHPLNSVNNLIVLNGTWAKAKRIYKENPWLRILP-HMKLDLKNMSLFSEVRHQPKFGFFSTI-----ALKVIKDH

Query:  PEGLDGFV
        PEGLD  +
Subjt:  PEGLDGFV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGGATTTTCCTCGCAGTTTCAAAAGGCCCGTCTGTCCATCCTACTCGAAACCGACCCGTATATGTCCTTGTTCGCGGCTCCAAAGCCCTAGTCTTGAGAACTCAAT
CGAAGTAATATTTCTTCAGCATAGTTTAGAGAAAAAGCACCCGCTAAATTCTGTTAATAATTTGATAGTTTTAAATGGAACATGGGCAAAAGCAAAGAGAATATACAAGG
AAAATCCTTGGTTGAGAATTTTGCCACATATGAAGTTGGATTTAAAGAACATGAGCTTGTTTAGTGAAGTGAGACATCAGCCTAAGTTTGGTTTTTTCTCCACCATTGCC
TTGAAAGTAATAAAAGATCACCCTGAGGGGCTGGATGGATTTGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTGGATTTTCCTCGCAGTTTCAAAAGGCCCGTCTGTCCATCCTACTCGAAACCGACCCGTATATGTCCTTGTTCGCGGCTCCAAAGCCCTAGTCTTGAGAACTCAAT
CGAAGTAATATTTCTTCAGCATAGTTTAGAGAAAAAGCACCCGCTAAATTCTGTTAATAATTTGATAGTTTTAAATGGAACATGGGCAAAAGCAAAGAGAATATACAAGG
AAAATCCTTGGTTGAGAATTTTGCCACATATGAAGTTGGATTTAAAGAACATGAGCTTGTTTAGTGAAGTGAGACATCAGCCTAAGTTTGGTTTTTTCTCCACCATTGCC
TTGAAAGTAATAAAAGATCACCCTGAGGGGCTGGATGGATTTGTTTGA
Protein sequenceShow/hide protein sequence
MVDFPRSFKRPVCPSYSKPTRICPCSRLQSPSLENSIEVIFLQHSLEKKHPLNSVNNLIVLNGTWAKAKRIYKENPWLRILPHMKLDLKNMSLFSEVRHQPKFGFFSTIA
LKVIKDHPEGLDGFV