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ClCG05G014660 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG05G014660
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionReverse transcriptase, RNA-dependent DNA polymerase
Genome locationCG_Chr05:25014051..25014550
RNA-Seq ExpressionClCG05G014660
SyntenyClCG05G014660
Gene Ontology termsGO:0044237 - cellular metabolic process (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_016902197.1 PREDICTED: uncharacterized protein LOC107991581 isoform X1 [Cucumis melo]2.1e-3048.15Show/hide
Query:  MTNAMSTGSTNGPESTKFNNPPLNQLLYQITNTKLEQGNYLLWKTFALPILQSYKLEGHLSDKNPCPPMFLPILGDSSTLVATNAEGA-----SSSQMIS
        M NA  T +     S  F+NPPLNQ+L Q+T  KL++ NYLLWKT ALPIL+ YKLEGHL+ + PCP  F  +L  SS+      EGA     +SS +  
Subjt:  MTNAMSTGSTNGPESTKFNNPPLNQLLYQITNTKLEQGNYLLWKTFALPILQSYKLEGHLSDKNPCPPMFLPILGDSSTLVATNAEGA-----SSSQMIS

Query:  KVV--------------VSWLYNSMMLEVAIQLMGFNNMKELWEAIQELFGIQLRAEEDYLR
        ++V              + WLYNSM  +VAIQLMGF N+++LW+A Q+ FG+Q RAEED+LR
Subjt:  KVV--------------VSWLYNSMMLEVAIQLMGFNNMKELWEAIQELFGIQLRAEEDYLR

XP_016902203.1 PREDICTED: uncharacterized protein LOC107991581 isoform X3 [Cucumis melo]2.1e-3048.15Show/hide
Query:  MTNAMSTGSTNGPESTKFNNPPLNQLLYQITNTKLEQGNYLLWKTFALPILQSYKLEGHLSDKNPCPPMFLPILGDSSTLVATNAEGA-----SSSQMIS
        M NA  T +     S  F+NPPLNQ+L Q+T  KL++ NYLLWKT ALPIL+ YKLEGHL+ + PCP  F  +L  SS+      EGA     +SS +  
Subjt:  MTNAMSTGSTNGPESTKFNNPPLNQLLYQITNTKLEQGNYLLWKTFALPILQSYKLEGHLSDKNPCPPMFLPILGDSSTLVATNAEGA-----SSSQMIS

Query:  KVV--------------VSWLYNSMMLEVAIQLMGFNNMKELWEAIQELFGIQLRAEEDYLR
        ++V              + WLYNSM  +VAIQLMGF N+++LW+A Q+ FG+Q RAEED+LR
Subjt:  KVV--------------VSWLYNSMMLEVAIQLMGFNNMKELWEAIQELFGIQLRAEEDYLR

XP_016902205.1 PREDICTED: uncharacterized protein LOC107991581 isoform X5 [Cucumis melo]2.1e-3048.15Show/hide
Query:  MTNAMSTGSTNGPESTKFNNPPLNQLLYQITNTKLEQGNYLLWKTFALPILQSYKLEGHLSDKNPCPPMFLPILGDSSTLVATNAEGA-----SSSQMIS
        M NA  T +     S  F+NPPLNQ+L Q+T  KL++ NYLLWKT ALPIL+ YKLEGHL+ + PCP  F  +L  SS+      EGA     +SS +  
Subjt:  MTNAMSTGSTNGPESTKFNNPPLNQLLYQITNTKLEQGNYLLWKTFALPILQSYKLEGHLSDKNPCPPMFLPILGDSSTLVATNAEGA-----SSSQMIS

Query:  KVV--------------VSWLYNSMMLEVAIQLMGFNNMKELWEAIQELFGIQLRAEEDYLR
        ++V              + WLYNSM  +VAIQLMGF N+++LW+A Q+ FG+Q RAEED+LR
Subjt:  KVV--------------VSWLYNSMMLEVAIQLMGFNNMKELWEAIQELFGIQLRAEEDYLR

XP_031745012.1 uncharacterized protein LOC116405217 [Cucumis sativus]4.9e-3554.42Show/hide
Query:  MTNAMSTGSTNGPESTKFNNPPLNQLLYQITNTKLEQGNYLLWKTFALPILQSYKLEGHLSDKNPCPPMFL--PILGDSSTLVATNAEGASSSQMIS--K
        MTN +   S  G  +T F+NPPLNQ+L Q+ + KL++GNYLLW+T ALPIL+SYKL+GHL+++N CPP F+  P  G SS    T        Q ++   
Subjt:  MTNAMSTGSTNGPESTKFNNPPLNQLLYQITNTKLEQGNYLLWKTFALPILQSYKLEGHLSDKNPCPPMFL--PILGDSSTLVATNAEGASSSQMIS--K

Query:  VVVSWLYNSMMLEVAIQLMGFNNMKELWEAIQELFGIQLRAEEDYLR
        +++ W+YNSM  EVA+QLMGFN  K+LWEAIQ+LFG+QLRAEED+LR
Subjt:  VVVSWLYNSMMLEVAIQLMGFNNMKELWEAIQELFGIQLRAEEDYLR

XP_038887015.1 uncharacterized protein LOC120077182 [Benincasa hispida]1.3e-3050.94Show/hide
Query:  MTNAMSTGSTNGPESTKFNNPPLNQLLYQITNTKLEQGNYLLWKTFALPILQSYKLEGHLSDKNPCPPMF----LPIL--GDSSTLVATNAEGASSSQMI
        M NA++TGS+ G ESTKF+ PPLNQLL QITNTKLE+G ++LWKT ALPIL+ YKLE HLS    C PMF    +P +  GD  +  +  A  A+  +  
Subjt:  MTNAMSTGSTNGPESTKFNNPPLNQLLYQITNTKLEQGNYLLWKTFALPILQSYKLEGHLSDKNPCPPMF----LPIL--GDSSTLVATNAEGASSSQMI

Query:  S----------KVVVSWLYNSMMLEVAIQLMGFNNMKELWEAIQELFGIQLRAEEDYLR
        +          ++++ W YNSM  EVA+QLMG  + K LW+AI  LFG+Q RAE+DYLR
Subjt:  S----------KVVVSWLYNSMMLEVAIQLMGFNNMKELWEAIQELFGIQLRAEEDYLR

TrEMBL top hitse value%identityAlignment
A0A1S4E1U6 uncharacterized protein LOC107991581 isoform X11.0e-3048.15Show/hide
Query:  MTNAMSTGSTNGPESTKFNNPPLNQLLYQITNTKLEQGNYLLWKTFALPILQSYKLEGHLSDKNPCPPMFLPILGDSSTLVATNAEGA-----SSSQMIS
        M NA  T +     S  F+NPPLNQ+L Q+T  KL++ NYLLWKT ALPIL+ YKLEGHL+ + PCP  F  +L  SS+      EGA     +SS +  
Subjt:  MTNAMSTGSTNGPESTKFNNPPLNQLLYQITNTKLEQGNYLLWKTFALPILQSYKLEGHLSDKNPCPPMFLPILGDSSTLVATNAEGA-----SSSQMIS

Query:  KVV--------------VSWLYNSMMLEVAIQLMGFNNMKELWEAIQELFGIQLRAEEDYLR
        ++V              + WLYNSM  +VAIQLMGF N+++LW+A Q+ FG+Q RAEED+LR
Subjt:  KVV--------------VSWLYNSMMLEVAIQLMGFNNMKELWEAIQELFGIQLRAEEDYLR

A0A1S4E1U9 uncharacterized protein LOC107991581 isoform X41.0e-3048.15Show/hide
Query:  MTNAMSTGSTNGPESTKFNNPPLNQLLYQITNTKLEQGNYLLWKTFALPILQSYKLEGHLSDKNPCPPMFLPILGDSSTLVATNAEGA-----SSSQMIS
        M NA  T +     S  F+NPPLNQ+L Q+T  KL++ NYLLWKT ALPIL+ YKLEGHL+ + PCP  F  +L  SS+      EGA     +SS +  
Subjt:  MTNAMSTGSTNGPESTKFNNPPLNQLLYQITNTKLEQGNYLLWKTFALPILQSYKLEGHLSDKNPCPPMFLPILGDSSTLVATNAEGA-----SSSQMIS

Query:  KVV--------------VSWLYNSMMLEVAIQLMGFNNMKELWEAIQELFGIQLRAEEDYLR
        ++V              + WLYNSM  +VAIQLMGF N+++LW+A Q+ FG+Q RAEED+LR
Subjt:  KVV--------------VSWLYNSMMLEVAIQLMGFNNMKELWEAIQELFGIQLRAEEDYLR

A0A1S4E1V2 uncharacterized protein LOC107991581 isoform X31.0e-3048.15Show/hide
Query:  MTNAMSTGSTNGPESTKFNNPPLNQLLYQITNTKLEQGNYLLWKTFALPILQSYKLEGHLSDKNPCPPMFLPILGDSSTLVATNAEGA-----SSSQMIS
        M NA  T +     S  F+NPPLNQ+L Q+T  KL++ NYLLWKT ALPIL+ YKLEGHL+ + PCP  F  +L  SS+      EGA     +SS +  
Subjt:  MTNAMSTGSTNGPESTKFNNPPLNQLLYQITNTKLEQGNYLLWKTFALPILQSYKLEGHLSDKNPCPPMFLPILGDSSTLVATNAEGA-----SSSQMIS

Query:  KVV--------------VSWLYNSMMLEVAIQLMGFNNMKELWEAIQELFGIQLRAEEDYLR
        ++V              + WLYNSM  +VAIQLMGF N+++LW+A Q+ FG+Q RAEED+LR
Subjt:  KVV--------------VSWLYNSMMLEVAIQLMGFNNMKELWEAIQELFGIQLRAEEDYLR

A0A1S4E2K3 uncharacterized protein LOC107991581 isoform X51.0e-3048.15Show/hide
Query:  MTNAMSTGSTNGPESTKFNNPPLNQLLYQITNTKLEQGNYLLWKTFALPILQSYKLEGHLSDKNPCPPMFLPILGDSSTLVATNAEGA-----SSSQMIS
        M NA  T +     S  F+NPPLNQ+L Q+T  KL++ NYLLWKT ALPIL+ YKLEGHL+ + PCP  F  +L  SS+      EGA     +SS +  
Subjt:  MTNAMSTGSTNGPESTKFNNPPLNQLLYQITNTKLEQGNYLLWKTFALPILQSYKLEGHLSDKNPCPPMFLPILGDSSTLVATNAEGA-----SSSQMIS

Query:  KVV--------------VSWLYNSMMLEVAIQLMGFNNMKELWEAIQELFGIQLRAEEDYLR
        ++V              + WLYNSM  +VAIQLMGF N+++LW+A Q+ FG+Q RAEED+LR
Subjt:  KVV--------------VSWLYNSMMLEVAIQLMGFNNMKELWEAIQELFGIQLRAEEDYLR

A0A5A7SIT7 Uncharacterized protein3.0e-3047.53Show/hide
Query:  MTNAMSTGSTNGPESTKFNNPPLNQLLYQITNTKLEQGNYLLWKTFALPILQSYKLEGHLSDKNPCPPMFLPILGDSSTLVATNAEGA-----SSSQMIS
        M NA  T +     S  F+NPPLNQ+L Q+   KL++ NYLLWKT ALPIL+ YKLEGHL+ + PCP  F  +L  SS+      EGA     +SS +  
Subjt:  MTNAMSTGSTNGPESTKFNNPPLNQLLYQITNTKLEQGNYLLWKTFALPILQSYKLEGHLSDKNPCPPMFLPILGDSSTLVATNAEGA-----SSSQMIS

Query:  KVV--------------VSWLYNSMMLEVAIQLMGFNNMKELWEAIQELFGIQLRAEEDYLR
        ++V              + WLYNSM  +VAIQLMGF N+++LW+A Q+ FG+Q RAEED+LR
Subjt:  KVV--------------VSWLYNSMMLEVAIQLMGFNNMKELWEAIQELFGIQLRAEEDYLR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCAACGCCATGTCTACCGGAAGCACCAATGGTCCTGAATCTACGAAATTTAACAATCCACCACTGAATCAACTTCTTTATCAAATTACAAATACAAAGCTCGAGCA
AGGAAATTATCTACTATGGAAGACGTTTGCCCTACCCATACTTCAAAGCTACAAACTCGAAGGTCATCTCTCTGATAAGAACCCCTGCCCTCCAATGTTTCTTCCCATCC
TTGGTGATAGCTCGACACTAGTAGCAACCAATGCTGAAGGAGCTTCAAGTTCCCAAATGATTTCTAAAGTTGTTGTTAGCTGGTTGTACAACTCAATGATGCTAGAAGTG
GCTATACAACTCATGGGTTTTAATAATATGAAAGAACTTTGGGAAGCTATTCAGGAACTTTTTGGCATTCAATTGAGGGCTGAGGAAGATTATCTACGATAG
mRNA sequenceShow/hide mRNA sequence
ATGACCAACGCCATGTCTACCGGAAGCACCAATGGTCCTGAATCTACGAAATTTAACAATCCACCACTGAATCAACTTCTTTATCAAATTACAAATACAAAGCTCGAGCA
AGGAAATTATCTACTATGGAAGACGTTTGCCCTACCCATACTTCAAAGCTACAAACTCGAAGGTCATCTCTCTGATAAGAACCCCTGCCCTCCAATGTTTCTTCCCATCC
TTGGTGATAGCTCGACACTAGTAGCAACCAATGCTGAAGGAGCTTCAAGTTCCCAAATGATTTCTAAAGTTGTTGTTAGCTGGTTGTACAACTCAATGATGCTAGAAGTG
GCTATACAACTCATGGGTTTTAATAATATGAAAGAACTTTGGGAAGCTATTCAGGAACTTTTTGGCATTCAATTGAGGGCTGAGGAAGATTATCTACGATAG
Protein sequenceShow/hide protein sequence
MTNAMSTGSTNGPESTKFNNPPLNQLLYQITNTKLEQGNYLLWKTFALPILQSYKLEGHLSDKNPCPPMFLPILGDSSTLVATNAEGASSSQMISKVVVSWLYNSMMLEV
AIQLMGFNNMKELWEAIQELFGIQLRAEEDYLR