CuGenDBv2

Gene ID	ClCG05G014740
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	Trafficking protein particle complex subunit
Genome location	CG_Chr05:25334905..25340963
RNA-Seq Expression	ClCG05G014740
Synteny	ClCG05G014740
Gene Ontology terms	GO:0048193 - Golgi vesicle transport (biological process) GO:0005737 - cytoplasm (cellular component) GO:0012505 - endomembrane system (cellular component) GO:0030008 - TRAPP complex (cellular component) GO:0043231 - intracellular membrane-bounded organelle (cellular component)
InterPro domains	IPR007194 - Transport protein particle (TRAPP) component IPR016721 - Bet3 family IPR024096 - NO signalling/Golgi transport ligand-binding domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_008454543.1 PREDICTED: trafficking protein particle complex subunit 3 [Cucumis melo]

2.5e-92

77.08

Show/hide

Query:  MPPAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRLIDEFLAKSNISRCVDFKETADVIAKASLCTPRLILWDNPS
        MP AGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRLIDEFLAKSNISRCVDFKETADVIAK               
Subjt:  MPPAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRLIDEFLAKSNISRCVDFKETADVIAKASLCTPRLILWDNPS

Query:  GCQGNSLSPILHALVCLVHMDTATFCSWHHLKFGPAIEGVGLKMFLGVNATVTNWDAEGTCCSIVLEDNPLVDFVELPDTCQGLHYCNILSGVIRGALEM
                                               VGLKMFLGVNATVTNWDAEGTCCSIVLEDNPLVDFVELPDTCQGLHYCNILSGVIRGALEM
Subjt:  GCQGNSLSPILHALVCLVHMDTATFCSWHHLKFGPAIEGVGLKMFLGVNATVTNWDAEGTCCSIVLEDNPLVDFVELPDTCQGLHYCNILSGVIRGALEM

Query:  VSMKTEVTWLRDMLRGDDSFELQVKLLKQVPEEYPYKDDE
        VSMKTEVTWLRDMLRGDDSFELQVKLLKQVPEEYPYKDDE
Subjt:  VSMKTEVTWLRDMLRGDDSFELQVKLLKQVPEEYPYKDDE

XP_022139368.1 trafficking protein particle complex subunit 3 [Momordica charantia]

1.9e-92

76.67

Show/hide

Query:  MPPAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRLIDEFLAKSNISRCVDFKETADVIAKASLCTPRLILWDNPS
        MPPAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRLIDEFLAKSNISRCVDFKETA+VIAK               
Subjt:  MPPAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRLIDEFLAKSNISRCVDFKETADVIAKASLCTPRLILWDNPS

Query:  GCQGNSLSPILHALVCLVHMDTATFCSWHHLKFGPAIEGVGLKMFLGVNATVTNWDAEGTCCSIVLEDNPLVDFVELPDTCQGLHYCNILSGVIRGALEM
                                               VGLKMFLGVNATVTNWDAEGTCCSIVLEDNPLVDFVELPDTCQGLHYCNILSGVIRGALEM
Subjt:  GCQGNSLSPILHALVCLVHMDTATFCSWHHLKFGPAIEGVGLKMFLGVNATVTNWDAEGTCCSIVLEDNPLVDFVELPDTCQGLHYCNILSGVIRGALEM

Query:  VSMKTEVTWLRDMLRGDDSFELQVKLLKQVPEEYPYKDDE
        VSMKTEVTWLRDMLRGDD+FELQVKLLKQVPEEYPYKDDE
Subjt:  VSMKTEVTWLRDMLRGDDSFELQVKLLKQVPEEYPYKDDE

XP_022941300.1 trafficking protein particle complex subunit 3-like [Cucurbita moschata]

1.5e-92

76.67

Show/hide

Query:  MPPAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRLIDEFLAKSNISRCVDFKETADVIAKASLCTPRLILWDNPS
        MPPAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRLIDEFLAKSNISRCVDFKETADVIAK               
Subjt:  MPPAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRLIDEFLAKSNISRCVDFKETADVIAKASLCTPRLILWDNPS

Query:  GCQGNSLSPILHALVCLVHMDTATFCSWHHLKFGPAIEGVGLKMFLGVNATVTNWDAEGTCCSIVLEDNPLVDFVELPDTCQGLHYCNILSGVIRGALEM
                                               VGLKMFLGVNATVTNWDAEGTCCSIVLEDNPLVDFVELPDTCQGLHYCNILSGVIRGALEM
Subjt:  GCQGNSLSPILHALVCLVHMDTATFCSWHHLKFGPAIEGVGLKMFLGVNATVTNWDAEGTCCSIVLEDNPLVDFVELPDTCQGLHYCNILSGVIRGALEM

Query:  VSMKTEVTWLRDMLRGDDSFELQVKLLKQVPEEYPYKDDE
        VSMKTEVTWLRDMLRGDD FELQVKLLKQ+PEEYPYKDDE
Subjt:  VSMKTEVTWLRDMLRGDDSFELQVKLLKQVPEEYPYKDDE

XP_022981618.1 trafficking protein particle complex subunit 3-like [Cucurbita maxima]

1.9e-92

76.25

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Query:  MPPAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRLIDEFLAKSNISRCVDFKETADVIAKASLCTPRLILWDNPS
        MPPAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRLIDEFLAKSNISRCVDFKETADVIAK               
Subjt:  MPPAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRLIDEFLAKSNISRCVDFKETADVIAKASLCTPRLILWDNPS

Query:  GCQGNSLSPILHALVCLVHMDTATFCSWHHLKFGPAIEGVGLKMFLGVNATVTNWDAEGTCCSIVLEDNPLVDFVELPDTCQGLHYCNILSGVIRGALEM
                                               VGLKMFLGVNATVTNWDAEGTCCSI+LEDNPLVDFVELPDTCQGLHYCNILSGVIRGALEM
Subjt:  GCQGNSLSPILHALVCLVHMDTATFCSWHHLKFGPAIEGVGLKMFLGVNATVTNWDAEGTCCSIVLEDNPLVDFVELPDTCQGLHYCNILSGVIRGALEM

Query:  VSMKTEVTWLRDMLRGDDSFELQVKLLKQVPEEYPYKDDE
        VSMKTEVTWLRDMLRGDD FELQVKLLKQ+PEEYPYKDDE
Subjt:  VSMKTEVTWLRDMLRGDDSFELQVKLLKQVPEEYPYKDDE

XP_038896395.1 trafficking protein particle complex subunit 3 [Benincasa hispida]

3.0e-93

77.5

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Query:  MPPAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRLIDEFLAKSNISRCVDFKETADVIAKASLCTPRLILWDNPS
        MPPAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRLIDEFLAKSNISRCVDFKETADVIAK               
Subjt:  MPPAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRLIDEFLAKSNISRCVDFKETADVIAKASLCTPRLILWDNPS

Query:  GCQGNSLSPILHALVCLVHMDTATFCSWHHLKFGPAIEGVGLKMFLGVNATVTNWDAEGTCCSIVLEDNPLVDFVELPDTCQGLHYCNILSGVIRGALEM
                                               VGLKMFLGVNATVTNWDAEGTCCSIVLEDNPLVDFVELPDTCQGLHYCNILSGVIRGALEM
Subjt:  GCQGNSLSPILHALVCLVHMDTATFCSWHHLKFGPAIEGVGLKMFLGVNATVTNWDAEGTCCSIVLEDNPLVDFVELPDTCQGLHYCNILSGVIRGALEM

Query:  VSMKTEVTWLRDMLRGDDSFELQVKLLKQVPEEYPYKDDE
        VSMKTEVTWLRDMLRGDDSFELQVKLLKQVPEEYPYKDDE
Subjt:  VSMKTEVTWLRDMLRGDDSFELQVKLLKQVPEEYPYKDDE

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LAM3 Trafficking protein particle complex subunit

1.2e-92

77.08

Show/hide

Query:  MPPAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRLIDEFLAKSNISRCVDFKETADVIAKASLCTPRLILWDNPS
        MP AGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRLIDEFLAKSNISRCVDFKETADVIAK               
Subjt:  MPPAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRLIDEFLAKSNISRCVDFKETADVIAKASLCTPRLILWDNPS

Query:  GCQGNSLSPILHALVCLVHMDTATFCSWHHLKFGPAIEGVGLKMFLGVNATVTNWDAEGTCCSIVLEDNPLVDFVELPDTCQGLHYCNILSGVIRGALEM
                                               VGLKMFLGVNATVTNWDAEGTCCSIVLEDNPLVDFVELPDTCQGLHYCNILSGVIRGALEM
Subjt:  GCQGNSLSPILHALVCLVHMDTATFCSWHHLKFGPAIEGVGLKMFLGVNATVTNWDAEGTCCSIVLEDNPLVDFVELPDTCQGLHYCNILSGVIRGALEM

Query:  VSMKTEVTWLRDMLRGDDSFELQVKLLKQVPEEYPYKDDE
        VSMKTEVTWLRDMLRGDDSFELQVKLLKQVPEEYPYKDDE
Subjt:  VSMKTEVTWLRDMLRGDDSFELQVKLLKQVPEEYPYKDDE

A0A5A7TX50 Trafficking protein particle complex subunit

1.2e-92

77.08

Show/hide

Query:  MPPAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRLIDEFLAKSNISRCVDFKETADVIAKASLCTPRLILWDNPS
        MP AGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRLIDEFLAKSNISRCVDFKETADVIAK               
Subjt:  MPPAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRLIDEFLAKSNISRCVDFKETADVIAKASLCTPRLILWDNPS

Query:  GCQGNSLSPILHALVCLVHMDTATFCSWHHLKFGPAIEGVGLKMFLGVNATVTNWDAEGTCCSIVLEDNPLVDFVELPDTCQGLHYCNILSGVIRGALEM
                                               VGLKMFLGVNATVTNWDAEGTCCSIVLEDNPLVDFVELPDTCQGLHYCNILSGVIRGALEM
Subjt:  GCQGNSLSPILHALVCLVHMDTATFCSWHHLKFGPAIEGVGLKMFLGVNATVTNWDAEGTCCSIVLEDNPLVDFVELPDTCQGLHYCNILSGVIRGALEM

Query:  VSMKTEVTWLRDMLRGDDSFELQVKLLKQVPEEYPYKDDE
        VSMKTEVTWLRDMLRGDDSFELQVKLLKQVPEEYPYKDDE
Subjt:  VSMKTEVTWLRDMLRGDDSFELQVKLLKQVPEEYPYKDDE

A0A6J1CFG3 Trafficking protein particle complex subunit

9.4e-93

76.67

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Query:  MPPAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRLIDEFLAKSNISRCVDFKETADVIAKASLCTPRLILWDNPS
        MPPAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRLIDEFLAKSNISRCVDFKETA+VIAK               
Subjt:  MPPAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRLIDEFLAKSNISRCVDFKETADVIAKASLCTPRLILWDNPS

Query:  GCQGNSLSPILHALVCLVHMDTATFCSWHHLKFGPAIEGVGLKMFLGVNATVTNWDAEGTCCSIVLEDNPLVDFVELPDTCQGLHYCNILSGVIRGALEM
                                               VGLKMFLGVNATVTNWDAEGTCCSIVLEDNPLVDFVELPDTCQGLHYCNILSGVIRGALEM
Subjt:  GCQGNSLSPILHALVCLVHMDTATFCSWHHLKFGPAIEGVGLKMFLGVNATVTNWDAEGTCCSIVLEDNPLVDFVELPDTCQGLHYCNILSGVIRGALEM

Query:  VSMKTEVTWLRDMLRGDDSFELQVKLLKQVPEEYPYKDDE
        VSMKTEVTWLRDMLRGDD+FELQVKLLKQVPEEYPYKDDE
Subjt:  VSMKTEVTWLRDMLRGDDSFELQVKLLKQVPEEYPYKDDE

A0A6J1FT71 Trafficking protein particle complex subunit

7.2e-93

76.67

Show/hide

Query:  MPPAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRLIDEFLAKSNISRCVDFKETADVIAKASLCTPRLILWDNPS
        MPPAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRLIDEFLAKSNISRCVDFKETADVIAK               
Subjt:  MPPAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRLIDEFLAKSNISRCVDFKETADVIAKASLCTPRLILWDNPS

Query:  GCQGNSLSPILHALVCLVHMDTATFCSWHHLKFGPAIEGVGLKMFLGVNATVTNWDAEGTCCSIVLEDNPLVDFVELPDTCQGLHYCNILSGVIRGALEM
                                               VGLKMFLGVNATVTNWDAEGTCCSIVLEDNPLVDFVELPDTCQGLHYCNILSGVIRGALEM
Subjt:  GCQGNSLSPILHALVCLVHMDTATFCSWHHLKFGPAIEGVGLKMFLGVNATVTNWDAEGTCCSIVLEDNPLVDFVELPDTCQGLHYCNILSGVIRGALEM

Query:  VSMKTEVTWLRDMLRGDDSFELQVKLLKQVPEEYPYKDDE
        VSMKTEVTWLRDMLRGDD FELQVKLLKQ+PEEYPYKDDE
Subjt:  VSMKTEVTWLRDMLRGDDSFELQVKLLKQVPEEYPYKDDE

A0A6J1J2K9 Trafficking protein particle complex subunit

9.4e-93

76.25

Show/hide

Query:  MPPAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRLIDEFLAKSNISRCVDFKETADVIAKASLCTPRLILWDNPS
        MPPAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRLIDEFLAKSNISRCVDFKETADVIAK               
Subjt:  MPPAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRLIDEFLAKSNISRCVDFKETADVIAKASLCTPRLILWDNPS

Query:  GCQGNSLSPILHALVCLVHMDTATFCSWHHLKFGPAIEGVGLKMFLGVNATVTNWDAEGTCCSIVLEDNPLVDFVELPDTCQGLHYCNILSGVIRGALEM
                                               VGLKMFLGVNATVTNWDAEGTCCSI+LEDNPLVDFVELPDTCQGLHYCNILSGVIRGALEM
Subjt:  GCQGNSLSPILHALVCLVHMDTATFCSWHHLKFGPAIEGVGLKMFLGVNATVTNWDAEGTCCSIVLEDNPLVDFVELPDTCQGLHYCNILSGVIRGALEM

Query:  VSMKTEVTWLRDMLRGDDSFELQVKLLKQVPEEYPYKDDE
        VSMKTEVTWLRDMLRGDD FELQVKLLKQ+PEEYPYKDDE
Subjt:  VSMKTEVTWLRDMLRGDDSFELQVKLLKQVPEEYPYKDDE

SwissProt top hits

e value

%identity

Alignment

O43617 Trafficking protein particle complex subunit 3

9.5e-42

41.1

Show/hide

Query:  ERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRLIDEFLAKSNISRCVDFKETADVIAKASLCTPRLILWDNPSGCQGNSLSPILHALVC
        +++++ELFTLTYGA V QL  D E  E+VNKQLD+MG+NIG+RLI++FLA+SN+ RC DF+ETADVIAK                               
Subjt:  ERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRLIDEFLAKSNISRCVDFKETADVIAKASLCTPRLILWDNPSGCQGNSLSPILHALVC

Query:  LVHMDTATFCSWHHLKFGPAIEGVGLKMFLGVNATVTNWDAEGTCCSIVLEDNPLVDFVELPDTCQGLHYCNILSGVIRGALEMVSMKTEVTWLRDMLRG
                               V  KM+LG+  ++TNW   G   S++LE+NPLVDFVELPD    L Y N+L GV+RGALEMV M  E  +++D L+G
Subjt:  LVHMDTATFCSWHHLKFGPAIEGVGLKMFLGVNATVTNWDAEGTCCSIVLEDNPLVDFVELPDTCQGLHYCNILSGVIRGALEMVSMKTEVTWLRDMLRG

Query:  DDSFELQVKLLKQVPEEYP
        D   E++++ ++++ +  P
Subjt:  DDSFELQVKLLKQVPEEYP

O55013 Trafficking protein particle complex subunit 3

3.3e-42

41.55

Show/hide

Query:  ERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRLIDEFLAKSNISRCVDFKETADVIAKASLCTPRLILWDNPSGCQGNSLSPILHALVC
        +++++ELFTLTYGA V QL  D E  E+VNKQLD+MGYNIG+RLI++FLA+SN+ RC DF+ETADVIAK                               
Subjt:  ERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRLIDEFLAKSNISRCVDFKETADVIAKASLCTPRLILWDNPSGCQGNSLSPILHALVC

Query:  LVHMDTATFCSWHHLKFGPAIEGVGLKMFLGVNATVTNWDAEGTCCSIVLEDNPLVDFVELPDTCQGLHYCNILSGVIRGALEMVSMKTEVTWLRDMLRG
                               V  KM+LG+  ++TNW   G   S++LE+NPLVDFVELPD    L Y N+L GV+RGALEMV M  E  +++D L+G
Subjt:  LVHMDTATFCSWHHLKFGPAIEGVGLKMFLGVNATVTNWDAEGTCCSIVLEDNPLVDFVELPDTCQGLHYCNILSGVIRGALEMVSMKTEVTWLRDMLRG

Query:  DDSFELQVKLLKQVPEEYP
        D   E++++ ++++ +  P
Subjt:  DDSFELQVKLLKQVPEEYP

Q5U1Z2 Trafficking protein particle complex subunit 3

3.3e-42

41.55

Show/hide

Query:  ERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRLIDEFLAKSNISRCVDFKETADVIAKASLCTPRLILWDNPSGCQGNSLSPILHALVC
        +++++ELFTLTYGA V QL  D E  E+VNKQLD+MGYNIG+RLI++FLA+SN+ RC DF+ETADVIAK                               
Subjt:  ERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRLIDEFLAKSNISRCVDFKETADVIAKASLCTPRLILWDNPSGCQGNSLSPILHALVC

Query:  LVHMDTATFCSWHHLKFGPAIEGVGLKMFLGVNATVTNWDAEGTCCSIVLEDNPLVDFVELPDTCQGLHYCNILSGVIRGALEMVSMKTEVTWLRDMLRG
                               V  KM+LG+  ++TNW   G   S++LE+NPLVDFVELPD    L Y N+L GV+RGALEMV M  E  +++D L+G
Subjt:  LVHMDTATFCSWHHLKFGPAIEGVGLKMFLGVNATVTNWDAEGTCCSIVLEDNPLVDFVELPDTCQGLHYCNILSGVIRGALEMVSMKTEVTWLRDMLRG

Query:  DDSFELQVKLLKQVPEEYP
        D   E++++ ++++ +  P
Subjt:  DDSFELQVKLLKQVPEEYP

Q5ZI57 Trafficking protein particle complex subunit 3

3.9e-43

42.01

Show/hide

Query:  ERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRLIDEFLAKSNISRCVDFKETADVIAKASLCTPRLILWDNPSGCQGNSLSPILHALVC
        +++N+ELFTLTYGA V QL  D E  E+VNKQLD+MGYNIG+RLI++FLA+SN+ RC DF+ETADVIAK                               
Subjt:  ERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRLIDEFLAKSNISRCVDFKETADVIAKASLCTPRLILWDNPSGCQGNSLSPILHALVC

Query:  LVHMDTATFCSWHHLKFGPAIEGVGLKMFLGVNATVTNWDAEGTCCSIVLEDNPLVDFVELPDTCQGLHYCNILSGVIRGALEMVSMKTEVTWLRDMLRG
                               +  KM+LG+  ++TNW   G   S++LE+NPLVDFVELPD    L Y N+L GV+RGALEMV M  +V +++D L+G
Subjt:  LVHMDTATFCSWHHLKFGPAIEGVGLKMFLGVNATVTNWDAEGTCCSIVLEDNPLVDFVELPDTCQGLHYCNILSGVIRGALEMVSMKTEVTWLRDMLRG

Query:  DDSFELQVKLLKQVPEEYP
        D   E+++K ++++ +  P
Subjt:  DDSFELQVKLLKQVPEEYP

Q86K94 Trafficking protein particle complex subunit 3

2.5e-42

44.3

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Query:  GDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRLIDEFLAKSNISRCVDFKETADVIAKASLCTPRLILWDNPSGCQGNSLS
        G+ +F  VE++N+ELFTLTYGA V QL+ D E++E+VN +L+QMGYNIGIRLI+EFLAKS I RC DF ETA+VIAK                       
Subjt:  GDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRLIDEFLAKSNISRCVDFKETADVIAKASLCTPRLILWDNPSGCQGNSLS

Query:  PILHALVCLVHMDTATFCSWHHLKFGPAIEGVGLKMFLGVNATVTNWDAEGTCCSIVLEDNPLVDFVELPDTCQ-GLHYCNILSGVIRGALEMVSMKTEV
                                       VG KMFLGVNA V +WDA      + +EDNPL+DFVELPD  +  L+Y NIL GV+RGALEMV MK + 
Subjt:  PILHALVCLVHMDTATFCSWHHLKFGPAIEGVGLKMFLGVNATVTNWDAEGTCCSIVLEDNPLVDFVELPDTCQ-GLHYCNILSGVIRGALEMVSMKTEV

Query:  TWLRDMLRGDDSFELQVKLLKQVPEEYP
        T+++  L  D + E++V L + + +  P
Subjt:  TWLRDMLRGDDSFELQVKLLKQVPEEYP

Arabidopsis top hits

e value

%identity

Alignment

AT5G54750.1 Transport protein particle (TRAPP) component

2.9e-86

67.5

Show/hide

Query:  MPPAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRLIDEFLAKSNISRCVDFKETADVIAKASLCTPRLILWDNPS
        M P GPRSGDAIF+S++RVNAELFTLTYGA VRQLLTDLEEVEEVNKQLDQMGYNIGIRLIDEFLAKS +SRCVDFKETA++IAK               
Subjt:  MPPAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRLIDEFLAKSNISRCVDFKETADVIAKASLCTPRLILWDNPS

Query:  GCQGNSLSPILHALVCLVHMDTATFCSWHHLKFGPAIEGVGLKMFLGVNATVTNWDAEGTCCSIVLEDNPLVDFVELPDTCQGLHYCNILSGVIRGALEM
                                               VG KMFLGV A+VT+WD++GTCCSI+LEDNPLVDFVELPDTCQGL+YCN+LSGVIRGALEM
Subjt:  GCQGNSLSPILHALVCLVHMDTATFCSWHHLKFGPAIEGVGLKMFLGVNATVTNWDAEGTCCSIVLEDNPLVDFVELPDTCQGLHYCNILSGVIRGALEM

Query:  VSMKTEVTWLRDMLRGDDSFELQVKLLKQVPEEYPYKDDE
        VSMKTEVTW RD+LRGDD++ELQVKLLKQV EEYPYKDDE
Subjt:  VSMKTEVTWLRDMLRGDDSFELQVKLLKQVPEEYPYKDDE

AT5G54750.2 Transport protein particle (TRAPP) component

1.8e-83

64.03

Show/hide

Query:  MPPAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQM-------------GYNIGIRLIDEFLAKSNISRCVDFKETADVIAKAS
        M P GPRSGDAIF+S++RVNAELFTLTYGA VRQLLTDLEEVEEVNKQLDQM             GYNIGIRLIDEFLAKS +SRCVDFKETA++IAK  
Subjt:  MPPAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQM-------------GYNIGIRLIDEFLAKSNISRCVDFKETADVIAKAS

Query:  LCTPRLILWDNPSGCQGNSLSPILHALVCLVHMDTATFCSWHHLKFGPAIEGVGLKMFLGVNATVTNWDAEGTCCSIVLEDNPLVDFVELPDTCQGLHYC
                                                            VG KMFLGV A+VT+WD++GTCCSI+LEDNPLVDFVELPDTCQGL+YC
Subjt:  LCTPRLILWDNPSGCQGNSLSPILHALVCLVHMDTATFCSWHHLKFGPAIEGVGLKMFLGVNATVTNWDAEGTCCSIVLEDNPLVDFVELPDTCQGLHYC

Query:  NILSGVIRGALEMVSMKTEVTWLRDMLRGDDSFELQVKLLKQVPEEYPYKDDE
        N+LSGVIRGALEMVSMKTEVTW RD+LRGDD++ELQVKLLKQV EEYPYKDDE
Subjt:  NILSGVIRGALEMVSMKTEVTWLRDMLRGDDSFELQVKLLKQVPEEYPYKDDE

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGCCTCCCGCTGGTCCTCGATCTGGTGATGCGATCTTCGCTAGTGTTGAGCGAGTGAATGCGGAGCTGTTTACGTTGACTTATGGAGCGACTGTCCGTCAATTGCTTAC
AGATCTGGAGGAGGTTGAGGAGGTTAACAAACAGCTCGATCAGATGGGTTATAATATTGGAATCAGGCTAATTGATGAGTTTCTGGCAAAATCTAATATCTCTAGATGTG
TGGACTTCAAGGAGACAGCTGATGTGATTGCAAAGGCCAGCTTATGCACACCTCGACTAATCTTATGGGACAATCCGTCTGGGTGTCAAGGAAACTCGTTGAGTCCTATA
CTCCATGCTTTGGTTTGCCTTGTCCATATGGACACCGCTACTTTTTGTAGTTGGCACCATTTGAAATTTGGCCCTGCAATTGAGGGGGTTGGCTTAAAAATGTTTTTGGG
AGTGAATGCAACGGTGACCAACTGGGATGCTGAAGGCACATGCTGCAGCATTGTTCTGGAGGACAATCCACTAGTGGACTTTGTTGAGCTTCCTGATACTTGTCAAGGTC
TCCATTACTGCAACATCTTAAGTGGAGTAATTAGAGGAGCACTTGAGATGGTGTCAATGAAAACAGAAGTAACATGGCTACGCGACATGCTGAGAGGAGACGACAGCTTC
GAATTACAAGTAAAATTGCTGAAGCAAGTCCCTGAAGAGTACCCTTACAAAGACGATGAATAA

mRNA sequence

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GTTTCTCCACTCCAAAGCCTTTTGATCCATCACACAGTTCAGTCTCATCCACTTTCTTCACCGGAACCGCCCTAACCGTCGGCGTCGGCGTCGGCTACACTCTTCGCTTT
CCGAATTTCGATCGCCGGAACTCGGCAACCACCGCAGCGTCGGCGAAAACTTTCCTTTGTGCTCAGTTCAGAATTCAGATCCATCATGCCTCCCGCTGGTCCTCGATCTG
GTGATGCGATCTTCGCTAGTGTTGAGCGAGTGAATGCGGAGCTGTTTACGTTGACTTATGGAGCGACTGTCCGTCAATTGCTTACAGATCTGGAGGAGGTTGAGGAGGTT
AACAAACAGCTCGATCAGATGGGTTATAATATTGGAATCAGGCTAATTGATGAGTTTCTGGCAAAATCTAATATCTCTAGATGTGTGGACTTCAAGGAGACAGCTGATGT
GATTGCAAAGGCCAGCTTATGCACACCTCGACTAATCTTATGGGACAATCCGTCTGGGTGTCAAGGAAACTCGTTGAGTCCTATACTCCATGCTTTGGTTTGCCTTGTCC
ATATGGACACCGCTACTTTTTGTAGTTGGCACCATTTGAAATTTGGCCCTGCAATTGAGGGGGTTGGCTTAAAAATGTTTTTGGGAGTGAATGCAACGGTGACCAACTGG
GATGCTGAAGGCACATGCTGCAGCATTGTTCTGGAGGACAATCCACTAGTGGACTTTGTTGAGCTTCCTGATACTTGTCAAGGTCTCCATTACTGCAACATCTTAAGTGG
AGTAATTAGAGGAGCACTTGAGATGGTGTCAATGAAAACAGAAGTAACATGGCTACGCGACATGCTGAGAGGAGACGACAGCTTCGAATTACAAGTAAAATTGCTGAAGC
AAGTCCCTGAAGAGTACCCTTACAAAGACGATGAATAAAATCTTCAACCAGAATAACTCTTTAGTTTCATCTCATTTGCTTGTTTTTTTTTCCTGCTCTGTTCATTTGCT
CCAAAAAAGATAGTTACATTTCTTCCTTCAACCTAACATCTTAATCAAGTTAAATTTATTATATACACTTTTTTGCTGTTGTGATGGATGAAAGGGAATGTATAGTAAAA
AATTTAGAGGAAAGTCCATGGGATTTTACTATTCTAATAATTAGTTATATGAACTCTCGTTAGAATAGTCTAGATAGTCGAGATGTGTGTAGTACTATGTCCAAACACAC
CACACCTGTGGTAGCAAGA

Protein sequence

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MPPAGPRSGDAIFASVERVNAELFTLTYGATVRQLLTDLEEVEEVNKQLDQMGYNIGIRLIDEFLAKSNISRCVDFKETADVIAKASLCTPRLILWDNPSGCQGNSLSPI
LHALVCLVHMDTATFCSWHHLKFGPAIEGVGLKMFLGVNATVTNWDAEGTCCSIVLEDNPLVDFVELPDTCQGLHYCNILSGVIRGALEMVSMKTEVTWLRDMLRGDDSF
ELQVKLLKQVPEEYPYKDDE

ClCG05G014740 (gene) of Watermelon (Charleston Gray) v2.5 genome