| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0043342.1 reverse transcriptase [Cucumis melo var. makuwa] | 3.1e-27 | 56.88 | Show/hide |
Query: VLTAAHLINRVPSRVLNFQTPIDCLKLSYPTTRLIPDVSLRVFGCTAF----------------KCVFVVYPFHQCGYKGFHPTSRKYFISMDITFLKDK
+LTAAHLINR+PSR+L+ QTP++CLK SYP+TRL+ V LRVFGCTA+ CVFV YPFHQCGYK FHP S+KYF+ MD+TF +++
Subjt: VLTAAHLINRVPSRVLNFQTPIDCLKLSYPTTRLIPDVSLRVFGCTAF----------------KCVFVVYPFHQCGYKGFHPTSRKYFISMDITFLKDK
Query: PFITVSPLQ
P+ +S LQ
Subjt: PFITVSPLQ
|
|
| KAA0048248.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 1.3e-28 | 46.75 | Show/hide |
Query: LFTRAFMPIHPNKMEWLKEKT----------VISLKL-------LVLTAAHLINRVPSRVLNFQTPIDCLKLSYPTTRLIPDVSLRVFGCTAF-------
LFT+ +P NKMEW +K ++S L +LT AHLINR+PSR+L+ QTP+DCLK SYP+TRL+ +V LRVFGC A+
Subjt: LFTRAFMPIHPNKMEWLKEKT----------VISLKL-------LVLTAAHLINRVPSRVLNFQTPIDCLKLSYPTTRLIPDVSLRVFGCTAF-------
Query: ---------KCVFVVYPFHQCGYKGFHPTSRKYFISMDITFLKDKPFITVSPLQ
CVF+ YP HQC YK FHP SRKYF++MD+TF +++P+ VS LQ
Subjt: ---------KCVFVVYPFHQCGYKGFHPTSRKYFISMDITFLKDKPFITVSPLQ
|
|
| KAA0054261.1 reverse transcriptase [Cucumis melo var. makuwa] | 2.2e-28 | 49.38 | Show/hide |
Query: LITSFPTLTTVPYLFTRAFMPIHPNKMEWLKEKTVISLKLLV---------------LTAAHLINRVPSRVLNFQTPIDCLKLSYPTTRLIPDVSLRVFG
L++S+P + LFT+ M NKM L EK V KLLV LTAAHLIN +PSRVL+FQTP+DCLK SYP+TRLIP+V LRVFG
Subjt: LITSFPTLTTVPYLFTRAFMPIHPNKMEWLKEKTVISLKLLV---------------LTAAHLINRVPSRVLNFQTPIDCLKLSYPTTRLIPDVSLRVFG
Query: CTAF----------------KCVFVVYPFHQCGYKGFHPTSRKYFISMDITFLKDKPFITVS
C A+ CVFV YP HQ GYK FHP+S KYF+ MD+TF++D+PF ++
Subjt: CTAF----------------KCVFVVYPFHQCGYKGFHPTSRKYFISMDITFLKDKPFITVS
|
|
| KAA0060782.1 reverse transcriptase [Cucumis melo var. makuwa] | 1.1e-27 | 62.39 | Show/hide |
Query: VLTAAHLINRVPSRVLNFQTPIDCLKLSYPTTRLIPDVSLRVFGCTAF----------------KCVFVVYPFHQCGYKGFHPTSRKYFISMDITFLKDK
VLTAAHLINR+PSRVL+ QTP++CLK SYP+TRLI D+ LRVFGCTA+ CVFV YP HQ GYK FHP+SRK F+SMD+TFL+D+
Subjt: VLTAAHLINRVPSRVLNFQTPIDCLKLSYPTTRLIPDVSLRVFGCTAF----------------KCVFVVYPFHQCGYKGFHPTSRKYFISMDITFLKDK
Query: PFITVSPLQ
PF VS LQ
Subjt: PFITVSPLQ
|
|
| TYK08009.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 1.3e-28 | 46.75 | Show/hide |
Query: LFTRAFMPIHPNKMEWLKEKT----------VISLKL-------LVLTAAHLINRVPSRVLNFQTPIDCLKLSYPTTRLIPDVSLRVFGCTAF-------
LFT+ +P NKMEW +K ++S L +LT AHLINR+PSR+L+ QTP+DCLK SYP+TRL+ +V LRVFGC A+
Subjt: LFTRAFMPIHPNKMEWLKEKT----------VISLKL-------LVLTAAHLINRVPSRVLNFQTPIDCLKLSYPTTRLIPDVSLRVFGCTAF-------
Query: ---------KCVFVVYPFHQCGYKGFHPTSRKYFISMDITFLKDKPFITVSPLQ
CVF+ YP HQC YK FHP SRKYF++MD+TF +++P+ VS LQ
Subjt: ---------KCVFVVYPFHQCGYKGFHPTSRKYFISMDITFLKDKPFITVSPLQ
|
|
| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7TJ72 Reverse transcriptase | 1.5e-27 | 56.88 | Show/hide |
Query: VLTAAHLINRVPSRVLNFQTPIDCLKLSYPTTRLIPDVSLRVFGCTAF----------------KCVFVVYPFHQCGYKGFHPTSRKYFISMDITFLKDK
+LTAAHLINR+PSR+L+ QTP++CLK SYP+TRL+ V LRVFGCTA+ CVFV YPFHQCGYK FHP S+KYF+ MD+TF +++
Subjt: VLTAAHLINRVPSRVLNFQTPIDCLKLSYPTTRLIPDVSLRVFGCTAF----------------KCVFVVYPFHQCGYKGFHPTSRKYFISMDITFLKDK
Query: PFITVSPLQ
P+ +S LQ
Subjt: PFITVSPLQ
|
|
| A0A5A7TZ46 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 6.1e-29 | 46.75 | Show/hide |
Query: LFTRAFMPIHPNKMEWLKEKT----------VISLKL-------LVLTAAHLINRVPSRVLNFQTPIDCLKLSYPTTRLIPDVSLRVFGCTAF-------
LFT+ +P NKMEW +K ++S L +LT AHLINR+PSR+L+ QTP+DCLK SYP+TRL+ +V LRVFGC A+
Subjt: LFTRAFMPIHPNKMEWLKEKT----------VISLKL-------LVLTAAHLINRVPSRVLNFQTPIDCLKLSYPTTRLIPDVSLRVFGCTAF-------
Query: ---------KCVFVVYPFHQCGYKGFHPTSRKYFISMDITFLKDKPFITVSPLQ
CVF+ YP HQC YK FHP SRKYF++MD+TF +++P+ VS LQ
Subjt: ---------KCVFVVYPFHQCGYKGFHPTSRKYFISMDITFLKDKPFITVSPLQ
|
|
| A0A5A7UY25 Reverse transcriptase | 5.2e-28 | 62.39 | Show/hide |
Query: VLTAAHLINRVPSRVLNFQTPIDCLKLSYPTTRLIPDVSLRVFGCTAF----------------KCVFVVYPFHQCGYKGFHPTSRKYFISMDITFLKDK
VLTAAHLINR+PSRVL+ QTP++CLK SYP+TRLI D+ LRVFGCTA+ CVFV YP HQ GYK FHP+SRK F+SMD+TFL+D+
Subjt: VLTAAHLINRVPSRVLNFQTPIDCLKLSYPTTRLIPDVSLRVFGCTAF----------------KCVFVVYPFHQCGYKGFHPTSRKYFISMDITFLKDK
Query: PFITVSPLQ
PF VS LQ
Subjt: PFITVSPLQ
|
|
| A0A5D3CCG8 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 6.1e-29 | 46.75 | Show/hide |
Query: LFTRAFMPIHPNKMEWLKEKT----------VISLKL-------LVLTAAHLINRVPSRVLNFQTPIDCLKLSYPTTRLIPDVSLRVFGCTAF-------
LFT+ +P NKMEW +K ++S L +LT AHLINR+PSR+L+ QTP+DCLK SYP+TRL+ +V LRVFGC A+
Subjt: LFTRAFMPIHPNKMEWLKEKT----------VISLKL-------LVLTAAHLINRVPSRVLNFQTPIDCLKLSYPTTRLIPDVSLRVFGCTAF-------
Query: ---------KCVFVVYPFHQCGYKGFHPTSRKYFISMDITFLKDKPFITVSPLQ
CVF+ YP HQC YK FHP SRKYF++MD+TF +++P+ VS LQ
Subjt: ---------KCVFVVYPFHQCGYKGFHPTSRKYFISMDITFLKDKPFITVSPLQ
|
|
| A0A5D3CUV0 Reverse transcriptase | 1.0e-28 | 49.38 | Show/hide |
Query: LITSFPTLTTVPYLFTRAFMPIHPNKMEWLKEKTVISLKLLV---------------LTAAHLINRVPSRVLNFQTPIDCLKLSYPTTRLIPDVSLRVFG
L++S+P + LFT+ M NKM L EK V KLLV LTAAHLIN +PSRVL+FQTP+DCLK SYP+TRLIP+V LRVFG
Subjt: LITSFPTLTTVPYLFTRAFMPIHPNKMEWLKEKTVISLKLLV---------------LTAAHLINRVPSRVLNFQTPIDCLKLSYPTTRLIPDVSLRVFG
Query: CTAF----------------KCVFVVYPFHQCGYKGFHPTSRKYFISMDITFLKDKPFITVS
C A+ CVFV YP HQ GYK FHP+S KYF+ MD+TF++D+PF ++
Subjt: CTAF----------------KCVFVVYPFHQCGYKGFHPTSRKYFISMDITFLKDKPFITVS
|
|
