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ClCG05G015200 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG05G015200
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionNADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2
Genome locationCG_Chr05:26740948..26743068
RNA-Seq ExpressionClCG05G015200
SyntenyClCG05G015200
Gene Ontology termsGO:0005747 - mitochondrial respiratory chain complex I (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7024119.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2 [Cucurbita argyrosperma subsp. argyrosperma]4.9e-2262.77Show/hide
Query:  MGGAGHGAGTTYKGMTLHQPKRWHTVTGKGLCAVMWFWYW---------------------------AGDIHGKAMVTMGTGTRSFVGLLSMVG
        MGG GHGAGTT+KGMT+HQPKRWHTVTGKGLCAVMWFW                             AGDIHGKAMVTM   TRSFVGLLSMVG
Subjt:  MGGAGHGAGTTYKGMTLHQPKRWHTVTGKGLCAVMWFWYW---------------------------AGDIHGKAMVTMGTGTRSFVGLLSMVG
RYR69727.1 hypothetical protein Ahy_A03g016275 [Arachis hypogaea]3.2e-1345.22Show/hide
Query:  LLPS-PNTKVESHRP--IMGGAGHGAGTTYKGMTLHQPKRWHTVTGKGLCAVMWFWYWAGDIHGKAMVTMGTGTRSFVGLLSMVGEMARLRLQFSSYLHV
        LLPS P+ K+   RP   MGG GHG GTTYKG+T+HQPKRWHTV GKGLCAVMWFW +        +V  G   R+ + +++MV + +RL+L+      +
Subjt:  LLPS-PNTKVESHRP--IMGGAGHGAGTTYKGMTLHQPKRWHTVTGKGLCAVMWFWYWAGDIHGKAMVTMGTGTRSFVGLLSMVGEMARLRLQFSSYLHV

Query:  TTRATLSLIIHIFLL
             L L+ +++L+
Subjt:  TTRATLSLIIHIFLL
XP_022936519.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2 [Cucurbita moschata]8.3e-1492.11Show/hide
Query:  MGGAGHGAGTTYKGMTLHQPKRWHTVTGKGLCAVMWFW
        MGG GHGAGTT+KGMT+HQPKRWHTVTGKGLCAVMWFW
Subjt:  MGGAGHGAGTTYKGMTLHQPKRWHTVTGKGLCAVMWFW
XP_030447060.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2 [Syzygium oleosum]3.2e-1389.47Show/hide
Query:  MGGAGHGAGTTYKGMTLHQPKRWHTVTGKGLCAVMWFW
        MGG GHG GTTYKG+T+HQPKRWHTVTGKGLCAVMWFW
Subjt:  MGGAGHGAGTTYKGMTLHQPKRWHTVTGKGLCAVMWFW
XP_038897102.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2 [Benincasa hispida]1.7e-1497.37Show/hide
Query:  MGGAGHGAGTTYKGMTLHQPKRWHTVTGKGLCAVMWFW
        MGG GHGAGTTYKGMTLHQPKRWHTVTGKGLCAVMWFW
Subjt:  MGGAGHGAGTTYKGMTLHQPKRWHTVTGKGLCAVMWFW
TrEMBL top hitse value%identityAlignment
A0A1S3BV22 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 22.6e-1386.84Show/hide
Query:  MGGAGHGAGTTYKGMTLHQPKRWHTVTGKGLCAVMWFW
        MGG GHGAGTTYKG+T+H PKRWHTVTGKGLCA+MWFW
Subjt:  MGGAGHGAGTTYKGMTLHQPKRWHTVTGKGLCAVMWFW
A0A445E2R0 Uncharacterized protein1.5e-1345.22Show/hide
Query:  LLPS-PNTKVESHRP--IMGGAGHGAGTTYKGMTLHQPKRWHTVTGKGLCAVMWFWYWAGDIHGKAMVTMGTGTRSFVGLLSMVGEMARLRLQFSSYLHV
        LLPS P+ K+   RP   MGG GHG GTTYKG+T+HQPKRWHTV GKGLCAVMWFW +        +V  G   R+ + +++MV + +RL+L+      +
Subjt:  LLPS-PNTKVESHRP--IMGGAGHGAGTTYKGMTLHQPKRWHTVTGKGLCAVMWFWYWAGDIHGKAMVTMGTGTRSFVGLLSMVGEMARLRLQFSSYLHV

Query:  TTRATLSLIIHIFLL
             L L+ +++L+
Subjt:  TTRATLSLIIHIFLL
A0A5A7VAL3 NADH dehydrogenase (Ubiquinone) 1 beta subcomplex subunit 22.6e-1386.84Show/hide
Query:  MGGAGHGAGTTYKGMTLHQPKRWHTVTGKGLCAVMWFW
        MGG GHGAGTTYKG+T+H PKRWHTVTGKGLCA+MWFW
Subjt:  MGGAGHGAGTTYKGMTLHQPKRWHTVTGKGLCAVMWFW
A0A6J1F8I8 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 24.0e-1492.11Show/hide
Query:  MGGAGHGAGTTYKGMTLHQPKRWHTVTGKGLCAVMWFW
        MGG GHGAGTT+KGMT+HQPKRWHTVTGKGLCAVMWFW
Subjt:  MGGAGHGAGTTYKGMTLHQPKRWHTVTGKGLCAVMWFW
A0A6J1ILY9 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 24.0e-1492.11Show/hide
Query:  MGGAGHGAGTTYKGMTLHQPKRWHTVTGKGLCAVMWFW
        MGG GHGAGTT+KGMT+HQPKRWHTVTGKGLCAVMWFW
Subjt:  MGGAGHGAGTTYKGMTLHQPKRWHTVTGKGLCAVMWFW
SwissProt top hitse value%identityAlignment
Q8LDK3 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 25.1e-1481.58Show/hide
Query:  MGGAGHGAGTTYKGMTLHQPKRWHTVTGKGLCAVMWFW
        MGG GHG G TYKG+T+H PK WHTVTGKGLCAVMWFW
Subjt:  MGGAGHGAGTTYKGMTLHQPKRWHTVTGKGLCAVMWFW
Arabidopsis top hitse value%identityAlignment
AT1G76200.1 unknown protein3.6e-1581.58Show/hide
Query:  MGGAGHGAGTTYKGMTLHQPKRWHTVTGKGLCAVMWFW
        MGG GHG G TYKG+T+H PK WHTVTGKGLCAVMWFW
Subjt:  MGGAGHGAGTTYKGMTLHQPKRWHTVTGKGLCAVMWFW

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGCCGAATGAAAAGGCCCACTTACTGGAATGGCCCAGTTTCGGAGCCCATTTTACTACCTTCCCCCAACACAAAAGTCGAGTCGCATAGGCCAATTATGGGAGGTGC
TGGACACGGAGCTGGAACTACTTACAAGGGCATGACCCTACATCAGCCCAAGCGCTGGCACACCGTCACCGGCAAGGGATTGTGCGCCGTTATGTGGTTTTGGTACTGGG
CTGGAGACATCCATGGGAAGGCCATGGTGACCATGGGCACGGGCACTAGGTCCTTTGTAGGCTTGTTGTCAATGGTCGGGGAAATGGCAAGGCTTCGGCTGCAGTTTTCT
TCCTATTTGCATGTTACAACTCGAGCAACGTTATCTCTTATTATTCATATCTTCCTATTGAGAACTGAGATCGTGGTAGATTTGGTTCAACAAACAGAGCATGAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGCGCCGAATGAAAAGGCCCACTTACTGGAATGGCCCAGTTTCGGAGCCCATTTTACTACCTTCCCCCAACACAAAAGTCGAGTCGCATAGGCCAATTATGGGAGGTGC
TGGACACGGAGCTGGAACTACTTACAAGGGCATGACCCTACATCAGCCCAAGCGCTGGCACACCGTCACCGGCAAGGGATTGTGCGCCGTTATGTGGTTTTGGTACTGGG
CTGGAGACATCCATGGGAAGGCCATGGTGACCATGGGCACGGGCACTAGGTCCTTTGTAGGCTTGTTGTCAATGGTCGGGGAAATGGCAAGGCTTCGGCTGCAGTTTTCT
TCCTATTTGCATGTTACAACTCGAGCAACGTTATCTCTTATTATTCATATCTTCCTATTGAGAACTGAGATCGTGGTAGATTTGGTTCAACAAACAGAGCATGAGTGA
Protein sequenceShow/hide protein sequence
MRRMKRPTYWNGPVSEPILLPSPNTKVESHRPIMGGAGHGAGTTYKGMTLHQPKRWHTVTGKGLCAVMWFWYWAGDIHGKAMVTMGTGTRSFVGLLSMVGEMARLRLQFS
SYLHVTTRATLSLIIHIFLLRTEIVVDLVQQTEHE