CuGenDBv2

Gene ID	ClCG05G015230
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	Large proline-rich protein bag6-B isoform X1
Genome location	CG_Chr05:26783298..26784507
RNA-Seq Expression	ClCG05G015230
Synteny	ClCG05G015230
Gene Ontology terms	GO:0030433 - ubiquitin-dependent ERAD pathway (biological process) GO:0071818 - BAT3 complex (cellular component) GO:0031593 - polyubiquitin modification-dependent protein binding (molecular function) GO:0051787 - misfolded protein binding (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

XP_008452931.1 PREDICTED: uncharacterized protein LOC103493795 isoform X1 [Cucumis melo]

2.1e-75

86.67

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Query:  MNRFERA--ISQNGGSLPRFELPTNPQELQTIESLGIVLRNAQRLLSDYAISSLPRIAERFEQDGSSTDPTVRGQIQEELVQVGLRMQHFGALLLDLGSS
        MNRFERA  ISQNGG  PRFELPTNPQELQ+ ESL IVLRNAQ+LLSDYAI SLPRIAERFEQDGSS+DP VRGQIQEELVQVGLRMQ FGALLLDLGSS
Subjt:  MNRFERA--ISQNGGSLPRFELPTNPQELQTIESLGIVLRNAQRLLSDYAISSLPRIAERFEQDGSSTDPTVRGQIQEELVQVGLRMQHFGALLLDLGSS

Query:  ILTLRLEQSTIDLQDVALRVVSSNCPMDVFRAMVESSARISGSSTDDIANELCTHHTLAQEYLEMLASDINRRLQSNSEQ
        ILTLRLEQST+DLQD+A RVVS+NCPMDVFRA+VESSARISGSST DIAN LCTH +LA+EYLE+LASDI RRLQSNSEQ
Subjt:  ILTLRLEQSTIDLQDVALRVVSSNCPMDVFRAMVESSARISGSSTDDIANELCTHHTLAQEYLEMLASDINRRLQSNSEQ

XP_008452933.1 PREDICTED: uncharacterized protein LOC103493795 isoform X2 [Cucumis melo]

3.0e-74

86.67

Show/hide

Query:  MNRFERA--ISQNGGSLPRFELPTNPQELQTIESLGIVLRNAQRLLSDYAISSLPRIAERFEQDGSSTDPTVRGQIQEELVQVGLRMQHFGALLLDLGSS
        MNRFERA  ISQNGG+ PRFELPTNPQELQ+ ESL IVLRNAQ+LLSDYAI SLPRIAERFEQDGSS+DP VRGQIQEELVQVGLRMQ FGALLLDLGSS
Subjt:  MNRFERA--ISQNGGSLPRFELPTNPQELQTIESLGIVLRNAQRLLSDYAISSLPRIAERFEQDGSSTDPTVRGQIQEELVQVGLRMQHFGALLLDLGSS

Query:  ILTLRLEQSTIDLQDVALRVVSSNCPMDVFRAMVESSARISGSSTDDIANELCTHHTLAQEYLEMLASDINRRLQSNSEQ
        ILTLRLEQST+DLQD+A RVVS+NCPMDVFRA+VESSARISGSST DIAN LCTH +LA+EYLE+LASDI RRLQSNSEQ
Subjt:  ILTLRLEQSTIDLQDVALRVVSSNCPMDVFRAMVESSARISGSSTDDIANELCTHHTLAQEYLEMLASDINRRLQSNSEQ

XP_011654258.1 uncharacterized protein LOC101215937 isoform X1 [Cucumis sativus]

4.0e-74

84.44

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Query:  MNRFERA--ISQNGGSLPRFELPTNPQELQTIESLGIVLRNAQRLLSDYAISSLPRIAERFEQDGSSTDPTVRGQIQEELVQVGLRMQHFGALLLDLGSS
        MNRFERA  ISQNGG  PRFELPTNPQELQ+ ESL IVLRNAQ+LLSDYAI SLPRIAERFEQDGSS+DP VRGQIQEELVQVGLRMQ FGALLLDLGSS
Subjt:  MNRFERA--ISQNGGSLPRFELPTNPQELQTIESLGIVLRNAQRLLSDYAISSLPRIAERFEQDGSSTDPTVRGQIQEELVQVGLRMQHFGALLLDLGSS

Query:  ILTLRLEQSTIDLQDVALRVVSSNCPMDVFRAMVESSARISGSSTDDIANELCTHHTLAQEYLEMLASDINRRLQSNSEQ
        ILTLR+EQST+DLQD+A RVVS+NCPMDVFRA+VESSARISGSS  DIAN LCTH +LA+EYLE+LA+DI+RRL+SNSEQ
Subjt:  ILTLRLEQSTIDLQDVALRVVSSNCPMDVFRAMVESSARISGSSTDDIANELCTHHTLAQEYLEMLASDINRRLQSNSEQ

XP_023535553.1 uncharacterized protein LOC111796959 isoform X1 [Cucurbita pepo subsp. pepo]

8.0e-75

83.89

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Query:  MNRFERAISQNGGSLPRFELPTNPQELQTIESLGIVLRNAQRLLSDYAISSLPRIAERFEQDGSSTDPTVRGQIQEELVQVGLRMQHFGALLLDLGSSIL
        MNRFERAIS+NGGSL  FELPTNPQ+LQT +SLGIVLRNAQ+LL DYA SSLPRIAERFE++GSSTDPTVRGQIQEELVQVGLRMQ FGALLLDLG+SIL
Subjt:  MNRFERAISQNGGSLPRFELPTNPQELQTIESLGIVLRNAQRLLSDYAISSLPRIAERFEQDGSSTDPTVRGQIQEELVQVGLRMQHFGALLLDLGSSIL

Query:  TLRLEQSTIDLQDVALRVVSSNCPMDVFRAMVESSARISGSSTDDIANELCTHHTLAQEYLEMLASDINRRLQSNSEQGN
         LRLEQSTID+QDV  RV+ SN PMDVFRA+VESSA+ISGSS++DIANELCTH TLAQEYLEML+SDINRRLQ+NSE  N
Subjt:  TLRLEQSTIDLQDVALRVVSSNCPMDVFRAMVESSARISGSSTDDIANELCTHHTLAQEYLEMLASDINRRLQSNSEQGN

XP_038899964.1 uncharacterized protein LOC120087140 isoform X1 [Benincasa hispida]

3.4e-81

91.11

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Query:  MNRFERAISQNGGSLPRFELPTNPQELQTIESLGIVLRNAQRLLSDYAISSLPRIAERFEQDGSSTDPTVRGQIQEELVQVGLRMQHFGALLLDLGSSIL
        MNRFERAISQNGGSLPRFELPTNPQELQT ESLGIVLRNAQRLLSDYAISSLPRIAERFEQDGSSTDPTVRGQIQEELVQ+GLRMQ FGALLLDLGSSIL
Subjt:  MNRFERAISQNGGSLPRFELPTNPQELQTIESLGIVLRNAQRLLSDYAISSLPRIAERFEQDGSSTDPTVRGQIQEELVQVGLRMQHFGALLLDLGSSIL

Query:  TLRLEQSTIDLQDVALRVVSSNCPMDVFRAMVESSARISGSSTDDIANELCTHHTLAQEYLEMLASDINRRLQSNSEQGN
        TLRLEQSTIDLQD+A RVVS+NCPMDVFRA+VESSARISGSS  D+A ELCT  TLA+EYLEM ASDINRRLQSNSEQ N
Subjt:  TLRLEQSTIDLQDVALRVVSSNCPMDVFRAMVESSARISGSSTDDIANELCTHHTLAQEYLEMLASDINRRLQSNSEQGN

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L4G3 Uncharacterized protein

2.8e-73

84.44

Show/hide

Query:  MNRFERA--ISQNGGSLPRFELPTNPQELQTIESLGIVLRNAQRLLSDYAISSLPRIAERFEQDGSSTDPTVRGQIQEELVQVGLRMQHFGALLLDLGSS
        MNRFERA  ISQNGG+ PRFELPTNPQELQ+ ESL IVLRNAQ+LLSDYAI SLPRIAERFEQDGSS+DP VRGQIQEELVQVGLRMQ FGALLLDLGSS
Subjt:  MNRFERA--ISQNGGSLPRFELPTNPQELQTIESLGIVLRNAQRLLSDYAISSLPRIAERFEQDGSSTDPTVRGQIQEELVQVGLRMQHFGALLLDLGSS

Query:  ILTLRLEQSTIDLQDVALRVVSSNCPMDVFRAMVESSARISGSSTDDIANELCTHHTLAQEYLEMLASDINRRLQSNSEQ
        ILTLR+EQST+DLQD+A RVVS+NCPMDVFRA+VESSARISGSS  DIAN LCTH +LA+EYLE+LA+DI+RRL+SNSEQ
Subjt:  ILTLRLEQSTIDLQDVALRVVSSNCPMDVFRAMVESSARISGSSTDDIANELCTHHTLAQEYLEMLASDINRRLQSNSEQ

A0A1S3BUZ4 uncharacterized protein LOC103493795 isoform X2

1.5e-74

86.67

Show/hide

Query:  MNRFERA--ISQNGGSLPRFELPTNPQELQTIESLGIVLRNAQRLLSDYAISSLPRIAERFEQDGSSTDPTVRGQIQEELVQVGLRMQHFGALLLDLGSS
        MNRFERA  ISQNGG+ PRFELPTNPQELQ+ ESL IVLRNAQ+LLSDYAI SLPRIAERFEQDGSS+DP VRGQIQEELVQVGLRMQ FGALLLDLGSS
Subjt:  MNRFERA--ISQNGGSLPRFELPTNPQELQTIESLGIVLRNAQRLLSDYAISSLPRIAERFEQDGSSTDPTVRGQIQEELVQVGLRMQHFGALLLDLGSS

Query:  ILTLRLEQSTIDLQDVALRVVSSNCPMDVFRAMVESSARISGSSTDDIANELCTHHTLAQEYLEMLASDINRRLQSNSEQ
        ILTLRLEQST+DLQD+A RVVS+NCPMDVFRA+VESSARISGSST DIAN LCTH +LA+EYLE+LASDI RRLQSNSEQ
Subjt:  ILTLRLEQSTIDLQDVALRVVSSNCPMDVFRAMVESSARISGSSTDDIANELCTHHTLAQEYLEMLASDINRRLQSNSEQ

A0A1S3BV17 uncharacterized protein LOC103493795 isoform X1

1.0e-75

86.67

Show/hide

Query:  MNRFERA--ISQNGGSLPRFELPTNPQELQTIESLGIVLRNAQRLLSDYAISSLPRIAERFEQDGSSTDPTVRGQIQEELVQVGLRMQHFGALLLDLGSS
        MNRFERA  ISQNGG  PRFELPTNPQELQ+ ESL IVLRNAQ+LLSDYAI SLPRIAERFEQDGSS+DP VRGQIQEELVQVGLRMQ FGALLLDLGSS
Subjt:  MNRFERA--ISQNGGSLPRFELPTNPQELQTIESLGIVLRNAQRLLSDYAISSLPRIAERFEQDGSSTDPTVRGQIQEELVQVGLRMQHFGALLLDLGSS

Query:  ILTLRLEQSTIDLQDVALRVVSSNCPMDVFRAMVESSARISGSSTDDIANELCTHHTLAQEYLEMLASDINRRLQSNSEQ
        ILTLRLEQST+DLQD+A RVVS+NCPMDVFRA+VESSARISGSST DIAN LCTH +LA+EYLE+LASDI RRLQSNSEQ
Subjt:  ILTLRLEQSTIDLQDVALRVVSSNCPMDVFRAMVESSARISGSSTDDIANELCTHHTLAQEYLEMLASDINRRLQSNSEQ

A0A5A7VE91 Large proline-rich protein bag6-B isoform X1

1.0e-75

86.67

Show/hide

Query:  MNRFERA--ISQNGGSLPRFELPTNPQELQTIESLGIVLRNAQRLLSDYAISSLPRIAERFEQDGSSTDPTVRGQIQEELVQVGLRMQHFGALLLDLGSS
        MNRFERA  ISQNGG  PRFELPTNPQELQ+ ESL IVLRNAQ+LLSDYAI SLPRIAERFEQDGSS+DP VRGQIQEELVQVGLRMQ FGALLLDLGSS
Subjt:  MNRFERA--ISQNGGSLPRFELPTNPQELQTIESLGIVLRNAQRLLSDYAISSLPRIAERFEQDGSSTDPTVRGQIQEELVQVGLRMQHFGALLLDLGSS

Query:  ILTLRLEQSTIDLQDVALRVVSSNCPMDVFRAMVESSARISGSSTDDIANELCTHHTLAQEYLEMLASDINRRLQSNSEQ
        ILTLRLEQST+DLQD+A RVVS+NCPMDVFRA+VESSARISGSST DIAN LCTH +LA+EYLE+LASDI RRLQSNSEQ
Subjt:  ILTLRLEQSTIDLQDVALRVVSSNCPMDVFRAMVESSARISGSSTDDIANELCTHHTLAQEYLEMLASDINRRLQSNSEQ

A0A6J1IFG5 uncharacterized protein LOC111476470 isoform X1

2.5e-74

83.71

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Query:  MNRFERAISQNGGSLPRFELPTNPQELQTIESLGIVLRNAQRLLSDYAISSLPRIAERFEQDGSSTDPTVRGQIQEELVQVGLRMQHFGALLLDLGSSIL
        MNRFERAIS+NGGSL  FELPTNPQ+LQT +SLGIVLRNAQ+LL DYA SSLPRIAERFE++GSSTDPTVRGQIQEELVQVGLRMQ FGALLLDLG+SIL
Subjt:  MNRFERAISQNGGSLPRFELPTNPQELQTIESLGIVLRNAQRLLSDYAISSLPRIAERFEQDGSSTDPTVRGQIQEELVQVGLRMQHFGALLLDLGSSIL

Query:  TLRLEQSTIDLQDVALRVVSSNCPMDVFRAMVESSARISGSSTDDIANELCTHHTLAQEYLEMLASDINRRLQSNSEQ
         LRLEQSTID+QDV  RV+ SN PMDVFRA+VESSA+ISGSS++DIANELC+H TLAQEYLEML+SDINRRLQ+NSE+
Subjt:  TLRLEQSTIDLQDVALRVVSSNCPMDVFRAMVESSARISGSSTDDIANELCTHHTLAQEYLEMLASDINRRLQSNSEQ

SwissProt top hits

e value

%identity

Alignment

D5LXJ0 Ubiquitin-like domain-containing protein CIP73

4.1e-05

31.82

Show/hide

Query:  LPTNPQELQTIESLGIVLRNAQRLLSDYAISSLPRIAERFEQDGSSTDPTVRGQIQEELVQVGLRMQHFGALLLDLGSSILTLRLEQS
        L + P+ L +  SL  VL + +R++ + A   L ++A + E      DP  R   Q   ++ G+   + GA LL+LG + +TLRL Q+
Subjt:  LPTNPQELQTIESLGIVLRNAQRLLSDYAISSLPRIAERFEQDGSSTDPTVRGQIQEELVQVGLRMQHFGALLLDLGSSILTLRLEQS

Arabidopsis top hits

e value

%identity

Alignment

AT5G42220.1 Ubiquitin-like superfamily protein

1.0e-27

58.12

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Query:  MNRFERAISQNG----------GSLPRFELPTNPQELQTIESLGIVLRNAQRLLSDYAISSLPRIAERFEQDGSSTDPTVRGQIQEELVQVGLRMQHFGA
        +NR E+A+SQNG          G  PR ELP N +   T E+L +VLRNAQ LLS   +SSL  IA R EQDGSS+DPT+R QIQ E VQVGL MQH GA
Subjt:  MNRFERAISQNG----------GSLPRFELPTNPQELQTIESLGIVLRNAQRLLSDYAISSLPRIAERFEQDGSSTDPTVRGQIQEELVQVGLRMQHFGA

Query:  LLLDLGSSILTLRLEQS
        LLL+LG +ILTLR+  S
Subjt:  LLLDLGSSILTLRLEQS

Sequences

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CDS sequence

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ATGAACCGATTCGAGCGCGCAATATCTCAAAATGGTGGAAGTCTACCAAGGTTTGAACTGCCCACCAATCCTCAAGAATTGCAAACTATTGAATCTTTGGGTATTGTTTT
GCGAAATGCACAACGACTCCTAAGTGATTATGCCATATCTTCACTACCTCGTATTGCTGAGCGATTCGAGCAAGATGGGTCTTCAACTGATCCGACGGTGAGGGGTCAAA
TCCAAGAAGAGTTAGTTCAAGTAGGCCTTAGAATGCAACATTTTGGAGCGCTTCTTCTGGATCTGGGGAGTTCAATCTTGACGCTTCGTTTGGAACAATCAACTATTGAT
CTCCAAGATGTTGCTCTAAGGGTTGTATCAAGCAATTGTCCAATGGATGTGTTTCGTGCTATGGTAGAGAGTTCAGCTCGAATTTCTGGGAGTAGTACTGATGATATTGC
TAATGAATTGTGCACCCATCACACTCTTGCTCAGGAATATTTAGAGATGTTAGCAAGTGATATAAACCGACGTCTTCAAAGCAATTCAGAACAGGGAAATTAA

mRNA sequence

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Protein sequence

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MNRFERAISQNGGSLPRFELPTNPQELQTIESLGIVLRNAQRLLSDYAISSLPRIAERFEQDGSSTDPTVRGQIQEELVQVGLRMQHFGALLLDLGSSILTLRLEQSTID
LQDVALRVVSSNCPMDVFRAMVESSARISGSSTDDIANELCTHHTLAQEYLEMLASDINRRLQSNSEQGN

ClCG05G015230 (gene) of Watermelon (Charleston Gray) v2.5 genome