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ClCG05G016050 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG05G016050
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionTransmembrane protein
Genome locationCG_Chr05:28175311..28180398
RNA-Seq ExpressionClCG05G016050
SyntenyClCG05G016050
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7037665.1 hypothetical protein SDJN02_01295, partial [Cucurbita argyrosperma subsp. argyrosperma]3.5e-2369.89Show/hide
Query:  RGLSYRRHVGFARADRTPLTTIHYLHLL--HHGGIVDRSPSAMANRQQVDSRPWILDVVPFIVVILIAAHVLALVYWIYRLATDNRPQRRKAH
        + L  R     + ADRTPLTTIHYL           DRS S MAN+QQVDSRPWILD+VPFIVVILIAAHVLAL YWIYRLATDNR QRRKAH
Subjt:  RGLSYRRHVGFARADRTPLTTIHYLHLL--HHGGIVDRSPSAMANRQQVDSRPWILDVVPFIVVILIAAHVLALVYWIYRLATDNRPQRRKAH

XP_008453078.1 PREDICTED: uncharacterized protein LOC103493902 [Cucumis melo]5.2e-2777.91Show/hide
Query:  HVGFARADRTPLTTIHY--LHLLHHGGIVDRSPSAMANRQQVDSRPWILDVVPFIVVILIAAHVLALVYWIYRLATDNRPQRRKAH
        ++ FARADRTPLTT+HY     L      DRSPSAMAN+Q VDSRPWILDVVPFIVVILI AHVLALVYWIYRL TDNRPQRRKAH
Subjt:  HVGFARADRTPLTTIHY--LHLLHHGGIVDRSPSAMANRQQVDSRPWILDVVPFIVVILIAAHVLALVYWIYRLATDNRPQRRKAH

XP_022935881.1 uncharacterized protein LOC111442654 [Cucurbita moschata]2.0e-1898.04Show/hide
Query:  MANRQQVDSRPWILDVVPFIVVILIAAHVLALVYWIYRLATDNRPQRRKAH
        MAN+QQVDSRPWILDVVPFIVVILIAAHVLALVYWIYRLATDNRPQRRKAH
Subjt:  MANRQQVDSRPWILDVVPFIVVILIAAHVLALVYWIYRLATDNRPQRRKAH

XP_022977153.1 uncharacterized protein LOC111477303 [Cucurbita maxima]1.7e-1794.12Show/hide
Query:  MANRQQVDSRPWILDVVPFIVVILIAAHVLALVYWIYRLATDNRPQRRKAH
        MAN+QQVDSRPWILDVVPFIV ILIAAHVLALVYWIYRLAT+NRPQRRKAH
Subjt:  MANRQQVDSRPWILDVVPFIVVILIAAHVLALVYWIYRLATDNRPQRRKAH

XP_023535177.1 uncharacterized protein LOC111796681 [Cucurbita pepo subsp. pepo]5.8e-1896.08Show/hide
Query:  MANRQQVDSRPWILDVVPFIVVILIAAHVLALVYWIYRLATDNRPQRRKAH
        MAN+QQVDSRPWILD VPFIVVILIAAHVLALVYWIYRLATDNRPQRRKAH
Subjt:  MANRQQVDSRPWILDVVPFIVVILIAAHVLALVYWIYRLATDNRPQRRKAH

TrEMBL top hitse value%identityAlignment
A0A059CW86 Uncharacterized protein (Fragment)1.4e-1268.42Show/hide
Query:  DRSPSAMANRQQVDSRPWILDVVPFIVVILIAAHVLALVYWIYRLATDNRPQRRKAH
        +  P  MAN QQ  SRPWI+D  P++VV+LIAAHV ALVYWIYRLAT+ +PQRRKAH
Subjt:  DRSPSAMANRQQVDSRPWILDVVPFIVVILIAAHVLALVYWIYRLATDNRPQRRKAH

A0A0A0L5I3 Uncharacterized protein9.0e-1790.2Show/hide
Query:  MANRQQVDSRPWILDVVPFIVVILIAAHVLALVYWIYRLATDNRPQRRKAH
        MAN+  VDSRPWILDVVPFIVVILI AHVLALVYWIYRL TDNRPQRRKAH
Subjt:  MANRQQVDSRPWILDVVPFIVVILIAAHVLALVYWIYRLATDNRPQRRKAH

A0A1S3BWH4 uncharacterized protein LOC1034939022.5e-2777.91Show/hide
Query:  HVGFARADRTPLTTIHY--LHLLHHGGIVDRSPSAMANRQQVDSRPWILDVVPFIVVILIAAHVLALVYWIYRLATDNRPQRRKAH
        ++ FARADRTPLTT+HY     L      DRSPSAMAN+Q VDSRPWILDVVPFIVVILI AHVLALVYWIYRL TDNRPQRRKAH
Subjt:  HVGFARADRTPLTTIHY--LHLLHHGGIVDRSPSAMANRQQVDSRPWILDVVPFIVVILIAAHVLALVYWIYRLATDNRPQRRKAH

A0A6J1F6U7 uncharacterized protein LOC1114426549.7e-1998.04Show/hide
Query:  MANRQQVDSRPWILDVVPFIVVILIAAHVLALVYWIYRLATDNRPQRRKAH
        MAN+QQVDSRPWILDVVPFIVVILIAAHVLALVYWIYRLATDNRPQRRKAH
Subjt:  MANRQQVDSRPWILDVVPFIVVILIAAHVLALVYWIYRLATDNRPQRRKAH

A0A6J1IQM9 uncharacterized protein LOC1114773038.2e-1894.12Show/hide
Query:  MANRQQVDSRPWILDVVPFIVVILIAAHVLALVYWIYRLATDNRPQRRKAH
        MAN+QQVDSRPWILDVVPFIV ILIAAHVLALVYWIYRLAT+NRPQRRKAH
Subjt:  MANRQQVDSRPWILDVVPFIVVILIAAHVLALVYWIYRLATDNRPQRRKAH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G10745.1 unknown protein1.4e-0961.22Show/hide
Query:  MANRQQVDSRPWILDVVPFIVVILIAAHVLALVYWIYRLATDNRPQRRK
        MA  Q +  RPW LD+VP +VV+L AAHV+AL YWIYRLATD R Q ++
Subjt:  MANRQQVDSRPWILDVVPFIVVILIAAHVLALVYWIYRLATDNRPQRRK

AT5G24980.1 unknown protein6.4e-0766.67Show/hide
Query:  LDVVPFIVVILIAAHVLALVYWIYRLATDNRPQRRK
        +D+VP +VV L A HV+ALVYWIYRLA+D  PQR+K
Subjt:  LDVVPFIVVILIAAHVLALVYWIYRLATDNRPQRRK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGCCGAAATTGCTTTTTGGTTGGGCCACACAAGAGCGTCCAAATCCATGGTTTCAATGGAGCTTCTTCGACCGTGGATTATCGTATAGACGACATGTGGGTTTTGC
ACGGGCCGATCGGACACCATTAACGACGATCCATTACCTCCATCTTCTTCACCACGGAGGTATCGTAGATCGATCTCCATCTGCAATGGCGAACCGGCAACAGGTGGATT
CAAGGCCGTGGATTCTCGATGTCGTGCCTTTTATTGTTGTTATTCTAATTGCCGCGCATGTTCTCGCTTTGGTGTACTGGATTTACAGATTAGCGACGGATAACAGGCCT
CAGAGGAGGAAAGCACATTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGGCCGAAATTGCTTTTTGGTTGGGCCACACAAGAGCGTCCAAATCCATGGTTTCAATGGAGCTTCTTCGACCGTGGATTATCGTATAGACGACATGTGGGTTTTGC
ACGGGCCGATCGGACACCATTAACGACGATCCATTACCTCCATCTTCTTCACCACGGAGGTATCGTAGATCGATCTCCATCTGCAATGGCGAACCGGCAACAGGTGGATT
CAAGGCCGTGGATTCTCGATGTCGTGCCTTTTATTGTTGTTATTCTAATTGCCGCGCATGTTCTCGCTTTGGTGTACTGGATTTACAGATTAGCGACGGATAACAGGCCT
CAGAGGAGGAAAGCACATTGAAGAACAATTTGATTTACTTTACGGAAGATAAGAAGAAGTTATATGATATACCCTCTGCTATTGGCTCTTTTGTCATAGTTCCAGCTTGA
ATAAGTTTCCTAATCGGATCGAGTAGCATGTATTGTTGGAAAAAAAATCAATATTGGAGACGAG
Protein sequenceShow/hide protein sequence
MRPKLLFGWATQERPNPWFQWSFFDRGLSYRRHVGFARADRTPLTTIHYLHLLHHGGIVDRSPSAMANRQQVDSRPWILDVVPFIVVILIAAHVLALVYWIYRLATDNRP
QRRKAH