; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

ClCG05G017120 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG05G017120
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionPentatricopeptide repeat-containing protein
Genome locationCG_Chr05:29402092..29403682
RNA-Seq ExpressionClCG05G017120
SyntenyClCG05G017120
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038793.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]1.3e-7754.97Show/hide
Query:  MKKNKISPTIVTYGTLVEGYCRMGS------------------------------------REALGMMERFTVLEQGPTISTYNSLIKG-----------
        MKKN ISPT+VTYGTL+EGYCRM S                                    +EALGMMERF VLEQGPTISTYNSLIKG           
Subjt:  MKKNKISPTIVTYGTLVEGYCRMGS------------------------------------REALGMMERFTVLEQGPTISTYNSLIKG-----------

Query:  KILKSMIGRGFTPTPTTYNYFFRFFSKYGKIEED-------------------HLLLKMLCEEERLNIAIQVCNEMKAVGFDKDLATSTMLVHLLCNMHK
        KILK MIGRGFTPTPTTYNYFFRFFSKYGKIEE                    HLLLKMLCEEERLN+A+QVCNEMKA GFD DLATSTML+HLLC MHK
Subjt:  KILKSMIGRGFTPTPTTYNYFFRFFSKYGKIEED-------------------HLLLKMLCEEERLNIAIQVCNEMKAVGFDKDLATSTMLVHLLCNMHK

Query:  FEEAFEEFEHMIRQGI-----------------------------------------------------KTSIIRKAEAMSEILKVCKYPRELVKRRSPS
        FEEAF EFEHMI +GI                                                     +TSI+RKAEAMSE+LKVC  PRELVKRRSPS
Subjt:  FEEAFEEFEHMIRQGI-----------------------------------------------------KTSIIRKAEAMSEILKVCKYPRELVKRRSPS

Query:  ENVVFSANRLIDDIKKKTNPVT
        EN VFSAN+LIDDIKKK NP T
Subjt:  ENVVFSANRLIDDIKKKTNPVT

KAG6608175.1 Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]8.3e-8050.26Show/hide
Query:  MKKNKISPTIVTYGTLVEGYCRMGS------------------------------------REALGMMERFTVLEQGPTISTYNSLIKG-----------
        MKKNKISPT+VTYGTLVEGYCRM                                      +EALGMMERFTVLEQGPTISTYNSLIKG           
Subjt:  MKKNKISPTIVTYGTLVEGYCRMGS------------------------------------REALGMMERFTVLEQGPTISTYNSLIKG-----------

Query:  KILKSMIGRGFTPTPTTYNYFFRFFSKYGKIEED-------------------HLLLKMLCEEERLNIAIQVCNEMKAVGFDKDLATSTMLVHLLCNMHK
        KILK M+ RGFTPTPTTYNYFFRFFSKYGKIEE                    HLLLKMLCEEERLN+A+QVCNEMKA GFD DLATSTML+HLLC MHK
Subjt:  KILKSMIGRGFTPTPTTYNYFFRFFSKYGKIEED-------------------HLLLKMLCEEERLNIAIQVCNEMKAVGFDKDLATSTMLVHLLCNMHK

Query:  FEEAFEEFEHMIRQGI-----------------------------------------------------KTSIIRKAEAMSEILKVCKYPRELVKRRSPS
         EEAF EFEHMI +GI                                                     +TSI+RKAEAMSE+LKVCK PRELVKRRSPS
Subjt:  FEEAFEEFEHMIRQGI-----------------------------------------------------KTSIIRKAEAMSEILKVCKYPRELVKRRSPS

Query:  ENVVFSANRLIDDIKKKTNPVTV----------------------EPIYLNFAVVGHDVWMLLKRKVFQQNDDETHNC
        E  VF+ANRLIDDIKKK N  T                       +   + F  + +  W LLK K FQ NDDE HNC
Subjt:  ENVVFSANRLIDDIKKKTNPVTV----------------------EPIYLNFAVVGHDVWMLLKRKVFQQNDDETHNC

XP_004136469.1 pentatricopeptide repeat-containing protein At5g11310, mitochondrial [Cucumis sativus]1.6e-7855.11Show/hide
Query:  MKKNKISPTIVTYGTLVEGYCRMGS------------------------------------REALGMMERFTVLEQGPTISTYNSLIKG-----------
        MKKNKISPT+VTYGTL+EGYCRM S                                    +EALGMMERF VLEQGPTISTYNSL+KG           
Subjt:  MKKNKISPTIVTYGTLVEGYCRMGS------------------------------------REALGMMERFTVLEQGPTISTYNSLIKG-----------

Query:  KILKSMIGRGFTPTPTTYNYFFRFFSKYGKIEED-------------------HLLLKMLCEEERLNIAIQVCNEMKAVGFDKDLATSTMLVHLLCNMHK
        KILK MIGRGFTPTPTTYNYFFRFFSKYGKIEE                    HLLLKMLCEEERLN+A+QVCNEMKA GFD DLATSTML+HLLC MHK
Subjt:  KILKSMIGRGFTPTPTTYNYFFRFFSKYGKIEED-------------------HLLLKMLCEEERLNIAIQVCNEMKAVGFDKDLATSTMLVHLLCNMHK

Query:  FEEAFEEFEHMIRQGI-----------------------------------------------------KTSIIRKAEAMSEILKVCKYPRELVKRRSPS
        FEEAF EFEHMI +GI                                                     +TSI+RKAEAMSE+LKVCK PRELVKRRSPS
Subjt:  FEEAFEEFEHMIRQGI-----------------------------------------------------KTSIIRKAEAMSEILKVCKYPRELVKRRSPS

Query:  ENVVFSANRLIDDIKKKTNPVTV
        E+ VFSAN+LIDDIKKK NP TV
Subjt:  ENVVFSANRLIDDIKKKTNPVTV

XP_008466375.1 PREDICTED: pentatricopeptide repeat-containing protein At5g11310, mitochondrial [Cucumis melo]1.3e-7754.97Show/hide
Query:  MKKNKISPTIVTYGTLVEGYCRMGS------------------------------------REALGMMERFTVLEQGPTISTYNSLIKG-----------
        MKKN ISPT+VTYGTL+EGYCRM S                                    +EALGMMERF VLEQGPTISTYNSLIKG           
Subjt:  MKKNKISPTIVTYGTLVEGYCRMGS------------------------------------REALGMMERFTVLEQGPTISTYNSLIKG-----------

Query:  KILKSMIGRGFTPTPTTYNYFFRFFSKYGKIEED-------------------HLLLKMLCEEERLNIAIQVCNEMKAVGFDKDLATSTMLVHLLCNMHK
        KILK MIGRGFTPTPTTYNYFFRFFSKYGKIEE                    HLLLKMLCEEERLN+A+QVCNEMKA GFD DLATSTML+HLLC MHK
Subjt:  KILKSMIGRGFTPTPTTYNYFFRFFSKYGKIEED-------------------HLLLKMLCEEERLNIAIQVCNEMKAVGFDKDLATSTMLVHLLCNMHK

Query:  FEEAFEEFEHMIRQGI-----------------------------------------------------KTSIIRKAEAMSEILKVCKYPRELVKRRSPS
        FEEAF EFEHMI +GI                                                     +TSI+RKAEAMSE+LKVC  PRELVKRRSPS
Subjt:  FEEAFEEFEHMIRQGI-----------------------------------------------------KTSIIRKAEAMSEILKVCKYPRELVKRRSPS

Query:  ENVVFSANRLIDDIKKKTNPVT
        EN VFSAN+LIDDIKKK NP T
Subjt:  ENVVFSANRLIDDIKKKTNPVT

XP_022940385.1 pentatricopeptide repeat-containing protein At5g11310, mitochondrial [Cucurbita moschata]8.6e-7754.8Show/hide
Query:  MKKNKISPTIVTYGTLVEGYCRMGS------------------------------------REALGMMERFTVLEQGPTISTYNSLIKG-----------
        MKKNKISPT+VTYGTLVEGYCRM                                      +EALGMMERFTVLEQGPTISTYNSLIKG           
Subjt:  MKKNKISPTIVTYGTLVEGYCRMGS------------------------------------REALGMMERFTVLEQGPTISTYNSLIKG-----------

Query:  KILKSMIGRGFTPTPTTYNYFFRFFSKYGKIEED-------------------HLLLKMLCEEERLNIAIQVCNEMKAVGFDKDLATSTMLVHLLCNMHK
        KILK M+ RGFTPTPTTYNYFFRFFSKYGKIEE                    HLLLKMLCEEERLN+A+QVCNEMKA GFD DLATSTML+HLLC MHK
Subjt:  KILKSMIGRGFTPTPTTYNYFFRFFSKYGKIEED-------------------HLLLKMLCEEERLNIAIQVCNEMKAVGFDKDLATSTMLVHLLCNMHK

Query:  FEEAFEEFEHMIRQGI-----------------------------------------------------KTSIIRKAEAMSEILKVCKYPRELVKRRSPS
        FEEAF EFEHMI +GI                                                     +TSI+RKAEAMSE+LKVCK PRELVKRRSPS
Subjt:  FEEAFEEFEHMIRQGI-----------------------------------------------------KTSIIRKAEAMSEILKVCKYPRELVKRRSPS

Query:  ENVVFSANRLIDDIKKKTNPVTV
        E  VF+ANRLIDDIKKK N  TV
Subjt:  ENVVFSANRLIDDIKKKTNPVTV

TrEMBL top hitse value%identityAlignment
A0A0A0LEE0 Uncharacterized protein7.6e-7955.11Show/hide
Query:  MKKNKISPTIVTYGTLVEGYCRMGS------------------------------------REALGMMERFTVLEQGPTISTYNSLIKG-----------
        MKKNKISPT+VTYGTL+EGYCRM S                                    +EALGMMERF VLEQGPTISTYNSL+KG           
Subjt:  MKKNKISPTIVTYGTLVEGYCRMGS------------------------------------REALGMMERFTVLEQGPTISTYNSLIKG-----------

Query:  KILKSMIGRGFTPTPTTYNYFFRFFSKYGKIEED-------------------HLLLKMLCEEERLNIAIQVCNEMKAVGFDKDLATSTMLVHLLCNMHK
        KILK MIGRGFTPTPTTYNYFFRFFSKYGKIEE                    HLLLKMLCEEERLN+A+QVCNEMKA GFD DLATSTML+HLLC MHK
Subjt:  KILKSMIGRGFTPTPTTYNYFFRFFSKYGKIEED-------------------HLLLKMLCEEERLNIAIQVCNEMKAVGFDKDLATSTMLVHLLCNMHK

Query:  FEEAFEEFEHMIRQGI-----------------------------------------------------KTSIIRKAEAMSEILKVCKYPRELVKRRSPS
        FEEAF EFEHMI +GI                                                     +TSI+RKAEAMSE+LKVCK PRELVKRRSPS
Subjt:  FEEAFEEFEHMIRQGI-----------------------------------------------------KTSIIRKAEAMSEILKVCKYPRELVKRRSPS

Query:  ENVVFSANRLIDDIKKKTNPVTV
        E+ VFSAN+LIDDIKKK NP TV
Subjt:  ENVVFSANRLIDDIKKKTNPVTV

A0A1S3CR47 pentatricopeptide repeat-containing protein At5g11310, mitochondrial6.4e-7854.97Show/hide
Query:  MKKNKISPTIVTYGTLVEGYCRMGS------------------------------------REALGMMERFTVLEQGPTISTYNSLIKG-----------
        MKKN ISPT+VTYGTL+EGYCRM S                                    +EALGMMERF VLEQGPTISTYNSLIKG           
Subjt:  MKKNKISPTIVTYGTLVEGYCRMGS------------------------------------REALGMMERFTVLEQGPTISTYNSLIKG-----------

Query:  KILKSMIGRGFTPTPTTYNYFFRFFSKYGKIEED-------------------HLLLKMLCEEERLNIAIQVCNEMKAVGFDKDLATSTMLVHLLCNMHK
        KILK MIGRGFTPTPTTYNYFFRFFSKYGKIEE                    HLLLKMLCEEERLN+A+QVCNEMKA GFD DLATSTML+HLLC MHK
Subjt:  KILKSMIGRGFTPTPTTYNYFFRFFSKYGKIEED-------------------HLLLKMLCEEERLNIAIQVCNEMKAVGFDKDLATSTMLVHLLCNMHK

Query:  FEEAFEEFEHMIRQGI-----------------------------------------------------KTSIIRKAEAMSEILKVCKYPRELVKRRSPS
        FEEAF EFEHMI +GI                                                     +TSI+RKAEAMSE+LKVC  PRELVKRRSPS
Subjt:  FEEAFEEFEHMIRQGI-----------------------------------------------------KTSIIRKAEAMSEILKVCKYPRELVKRRSPS

Query:  ENVVFSANRLIDDIKKKTNPVT
        EN VFSAN+LIDDIKKK NP T
Subjt:  ENVVFSANRLIDDIKKKTNPVT

A0A5D3E616 Pentatricopeptide repeat-containing protein6.4e-7854.97Show/hide
Query:  MKKNKISPTIVTYGTLVEGYCRMGS------------------------------------REALGMMERFTVLEQGPTISTYNSLIKG-----------
        MKKN ISPT+VTYGTL+EGYCRM S                                    +EALGMMERF VLEQGPTISTYNSLIKG           
Subjt:  MKKNKISPTIVTYGTLVEGYCRMGS------------------------------------REALGMMERFTVLEQGPTISTYNSLIKG-----------

Query:  KILKSMIGRGFTPTPTTYNYFFRFFSKYGKIEED-------------------HLLLKMLCEEERLNIAIQVCNEMKAVGFDKDLATSTMLVHLLCNMHK
        KILK MIGRGFTPTPTTYNYFFRFFSKYGKIEE                    HLLLKMLCEEERLN+A+QVCNEMKA GFD DLATSTML+HLLC MHK
Subjt:  KILKSMIGRGFTPTPTTYNYFFRFFSKYGKIEED-------------------HLLLKMLCEEERLNIAIQVCNEMKAVGFDKDLATSTMLVHLLCNMHK

Query:  FEEAFEEFEHMIRQGI-----------------------------------------------------KTSIIRKAEAMSEILKVCKYPRELVKRRSPS
        FEEAF EFEHMI +GI                                                     +TSI+RKAEAMSE+LKVC  PRELVKRRSPS
Subjt:  FEEAFEEFEHMIRQGI-----------------------------------------------------KTSIIRKAEAMSEILKVCKYPRELVKRRSPS

Query:  ENVVFSANRLIDDIKKKTNPVT
        EN VFSAN+LIDDIKKK NP T
Subjt:  ENVVFSANRLIDDIKKKTNPVT

A0A6J1FQE9 pentatricopeptide repeat-containing protein At5g11310, mitochondrial4.2e-7754.8Show/hide
Query:  MKKNKISPTIVTYGTLVEGYCRMGS------------------------------------REALGMMERFTVLEQGPTISTYNSLIKG-----------
        MKKNKISPT+VTYGTLVEGYCRM                                      +EALGMMERFTVLEQGPTISTYNSLIKG           
Subjt:  MKKNKISPTIVTYGTLVEGYCRMGS------------------------------------REALGMMERFTVLEQGPTISTYNSLIKG-----------

Query:  KILKSMIGRGFTPTPTTYNYFFRFFSKYGKIEED-------------------HLLLKMLCEEERLNIAIQVCNEMKAVGFDKDLATSTMLVHLLCNMHK
        KILK M+ RGFTPTPTTYNYFFRFFSKYGKIEE                    HLLLKMLCEEERLN+A+QVCNEMKA GFD DLATSTML+HLLC MHK
Subjt:  KILKSMIGRGFTPTPTTYNYFFRFFSKYGKIEED-------------------HLLLKMLCEEERLNIAIQVCNEMKAVGFDKDLATSTMLVHLLCNMHK

Query:  FEEAFEEFEHMIRQGI-----------------------------------------------------KTSIIRKAEAMSEILKVCKYPRELVKRRSPS
        FEEAF EFEHMI +GI                                                     +TSI+RKAEAMSE+LKVCK PRELVKRRSPS
Subjt:  FEEAFEEFEHMIRQGI-----------------------------------------------------KTSIIRKAEAMSEILKVCKYPRELVKRRSPS

Query:  ENVVFSANRLIDDIKKKTNPVTV
        E  VF+ANRLIDDIKKK N  TV
Subjt:  ENVVFSANRLIDDIKKKTNPVTV

A0A6J1J1S6 pentatricopeptide repeat-containing protein At5g11310, mitochondrial3.5e-7654.18Show/hide
Query:  MKKNKISPTIVTYGTLVEGYCRMGS------------------------------------REALGMMERFTVLEQGPTISTYNSLIKG-----------
        MKKNKISPT+VTYGTLVEGYCRM                                      +EALGMMERFTVLEQGPTISTYNSLIKG           
Subjt:  MKKNKISPTIVTYGTLVEGYCRMGS------------------------------------REALGMMERFTVLEQGPTISTYNSLIKG-----------

Query:  KILKSMIGRGFTPTPTTYNYFFRFFSKYGKIEED-------------------HLLLKMLCEEERLNIAIQVCNEMKAVGFDKDLATSTMLVHLLCNMHK
        KILK M+ RGFTPTPTTYNYFFRFFSKYGKIEE                    HLLLKMLCEEERLN+A+QVCNEMKA GF  DLATSTML+HLLC MHK
Subjt:  KILKSMIGRGFTPTPTTYNYFFRFFSKYGKIEED-------------------HLLLKMLCEEERLNIAIQVCNEMKAVGFDKDLATSTMLVHLLCNMHK

Query:  FEEAFEEFEHMIRQGI-----------------------------------------------------KTSIIRKAEAMSEILKVCKYPRELVKRRSPS
        FEEAF EFEHMI +G+                                                     +TSI+RKAEAMSE+LKVCK PRELVKRRSPS
Subjt:  FEEAFEEFEHMIRQGI-----------------------------------------------------KTSIIRKAEAMSEILKVCKYPRELVKRRSPS

Query:  ENVVFSANRLIDDIKKKTNPVTV
        E  VF+ANRLIDDIKKK N  TV
Subjt:  ENVVFSANRLIDDIKKKTNPVTV

SwissProt top hitse value%identityAlignment
P0C7Q7 Putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial1.9e-1025.52Show/hide
Query:  ISPTIVTYGTLVEGYCRMGS-REALGMMERFTVLEQGPTISTYNSLIKG-----------KILKSMIGRGFTPTPTTYNYFFRFFSKYGKIE--------
        ISP I+TY TL++GYC      EA  M++     +  P I T+ SLIKG           K+ +++  RG      TY+   + F + GKI+        
Subjt:  ISPTIVTYGTLVEGYCRMGS-REALGMMERFTVLEQGPTISTYNSLIKG-----------KILKSMIGRGFTPTPTTYNYFFRFFSKYGKIE--------

Query:  -EDH----------LLLKMLCEEERLNIAIQVCNEMKAVGFDKDLATSTMLVHLLCNMHKFEEAFEEFEHMIRQGIKTSIIRKAEAMSEILK
           H          +LL  LC+  +L  A+++  +++    D  +   T ++  +C   K E+A+  F  +  +G+K +++     +S + K
Subjt:  -EDH----------LLLKMLCEEERLNIAIQVCNEMKAVGFDKDLATSTMLVHLLCNMHKFEEAFEEFEHMIRQGIKTSIIRKAEAMSEILK

Q3EDF8 Pentatricopeptide repeat-containing protein At1g099005.0e-1125.15Show/hide
Query:  MKKNKISPTIVTYGTLVEGYCRMGS-REALGMMERFTVLEQGPTISTYNSLIKG-----------KILKSMIGRGFTPTPTTYNYFFRFFSKYGKIEEDH
        + +  +SP +VTY T++   C  G  ++A+ +++R    +  P + TY  LI+            K+L  M  RG TP   TYN                
Subjt:  MKKNKISPTIVTYGTLVEGYCRMGS-REALGMMERFTVLEQGPTISTYNSLIKG-----------KILKSMIGRGFTPTPTTYNYFFRFFSKYGKIEEDH

Query:  LLLKMLCEEERLNIAIQVCNEMKAVGFDKDLATSTMLVHLLCNMHKFEEAFEEFEHMIRQGIKTSII
        +L+  +C+E RL+ AI+  N+M + G   ++ T  +++  +C+  ++ +A +    M+R+G   S++
Subjt:  LLLKMLCEEERLNIAIQVCNEMKAVGFDKDLATSTMLVHLLCNMHKFEEAFEEFEHMIRQGIKTSII

Q9LFM6 Pentatricopeptide repeat-containing protein At5g11310, mitochondrial2.6e-4436.68Show/hide
Query:  MKKNKISPTIVTYGTLVEGYCRMGS------------------------------------REALGMMERFTVLEQGPTISTYNSLIK-----------G
        MK   + PT+VTYGTL+EGYCRM                                       EALGMMERF V E GPTI TYNSL+K            
Subjt:  MKKNKISPTIVTYGTLVEGYCRMGS------------------------------------REALGMMERFTVLEQGPTISTYNSLIK-----------G

Query:  KILKSMIGRGFTPTPTTYNYFFRFFSKYGKIEED-------------------HLLLKMLCEEERLNIAIQVCNEMKAVGFDKDLATSTMLVHLLCNMHK
        KILK M+ RG  PT TTYN+FF++FSK+ K EE                    HL+LKMLCE+ +L++A+QV  EMK  G D DL T+TML+HLLC +  
Subjt:  KILKSMIGRGFTPTPTTYNYFFRFFSKYGKIEED-------------------HLLLKMLCEEERLNIAIQVCNEMKAVGFDKDLATSTMLVHLLCNMHK

Query:  FEEAFEEFEHMIRQGI-------------------------------------------------------KTSIIRKAEAMSEILKVCKYPRELVKRRS
         EEAFEEF++ +R+GI                                                       + SI+ +AEAMS++LK C+ PR+LVK R 
Subjt:  FEEAFEEFEHMIRQGI-------------------------------------------------------KTSIIRKAEAMSEILKVCKYPRELVKRRS

Query:  PSENVVFSANRLIDDIKKK
          +  V     LIDDI ++
Subjt:  PSENVVFSANRLIDDIKKK

Q9LPX2 Pentatricopeptide repeat-containing protein At1g12775, mitochondrial2.3e-1127.62Show/hide
Query:  MKKNKISPTIVTYGTLVEGYCRMGSRE-ALGMMERFTVLEQGPTISTYNSLIKG-----------KILKSMIGRGFTPTPTTYNYFFRFFSKYGKIEE-D
        M++  I    V Y  +++G C+ GS + A  +     +      I TYN+LI G           K+L+ MI R  +P   T++     F K GK+ E D
Subjt:  MKKNKISPTIVTYGTLVEGYCRMGSRE-ALGMMERFTVLEQGPTISTYNSLIKG-----------KILKSMIGRGFTPTPTTYNYFFRFFSKYGKIEE-D

Query:  HLLLKML------------------CEEERLNIAIQVCNEMKAVGFDKDLATSTMLVHLLCNMHKFEEAFEEFEHMIRQGI
         LL +M+                  C+E RL  AIQ+ + M + G D D+ T  +L++  C  ++ ++  E F  M  +G+
Subjt:  HLLLKML------------------CEEERLNIAIQVCNEMKAVGFDKDLATSTMLVHLLCNMHKFEEAFEEFEHMIRQGI

Q9LSL9 Pentatricopeptide repeat-containing protein At5g655601.3e-1126.34Show/hide
Query:  MKKNKISPTIVTYGTLVEGYCRMGS-REALGMMERFTVLEQGPTISTYNSLIKG-----------KILKSMIGRGFTPTPTTYNYFF----------RFF
        M ++K+ P I TY  +V GYC++G+  EA   + +       P   TY SLI G           K+   M  +G       Y +               
Subjt:  MKKNKISPTIVTYGTLVEGYCRMGS-REALGMMERFTVLEQGPTISTYNSLIKG-----------KILKSMIGRGFTPTPTTYNYFF----------RFF

Query:  SKYGKIEEDH---------LLLKMLCEEERLNIAIQVCNEMKAVGFDKDLATSTMLVHLLCNMHKFEEAFEEFEHMIRQGIKTSII
          + K+++D          +L+K LC  ER + A+ +  EM+  G   ++ T T+L+  LC+  KFE+A E    M+ +G+  ++I
Subjt:  SKYGKIEEDH---------LLLKMLCEEERLNIAIQVCNEMKAVGFDKDLATSTMLVHLLCNMHKFEEAFEEFEHMIRQGIKTSII

Arabidopsis top hitse value%identityAlignment
AT1G09900.1 Pentatricopeptide repeat (PPR-like) superfamily protein3.6e-1225.15Show/hide
Query:  MKKNKISPTIVTYGTLVEGYCRMGS-REALGMMERFTVLEQGPTISTYNSLIKG-----------KILKSMIGRGFTPTPTTYNYFFRFFSKYGKIEEDH
        + +  +SP +VTY T++   C  G  ++A+ +++R    +  P + TY  LI+            K+L  M  RG TP   TYN                
Subjt:  MKKNKISPTIVTYGTLVEGYCRMGS-REALGMMERFTVLEQGPTISTYNSLIKG-----------KILKSMIGRGFTPTPTTYNYFFRFFSKYGKIEEDH

Query:  LLLKMLCEEERLNIAIQVCNEMKAVGFDKDLATSTMLVHLLCNMHKFEEAFEEFEHMIRQGIKTSII
        +L+  +C+E RL+ AI+  N+M + G   ++ T  +++  +C+  ++ +A +    M+R+G   S++
Subjt:  LLLKMLCEEERLNIAIQVCNEMKAVGFDKDLATSTMLVHLLCNMHKFEEAFEEFEHMIRQGIKTSII

AT1G12700.1 ATP binding;nucleic acid binding;helicases1.4e-1125.52Show/hide
Query:  ISPTIVTYGTLVEGYCRMGS-REALGMMERFTVLEQGPTISTYNSLIKG-----------KILKSMIGRGFTPTPTTYNYFFRFFSKYGKIE--------
        ISP I+TY TL++GYC      EA  M++     +  P I T+ SLIKG           K+ +++  RG      TY+   + F + GKI+        
Subjt:  ISPTIVTYGTLVEGYCRMGS-REALGMMERFTVLEQGPTISTYNSLIKG-----------KILKSMIGRGFTPTPTTYNYFFRFFSKYGKIE--------

Query:  -EDH----------LLLKMLCEEERLNIAIQVCNEMKAVGFDKDLATSTMLVHLLCNMHKFEEAFEEFEHMIRQGIKTSIIRKAEAMSEILK
           H          +LL  LC+  +L  A+++  +++    D  +   T ++  +C   K E+A+  F  +  +G+K +++     +S + K
Subjt:  -EDH----------LLLKMLCEEERLNIAIQVCNEMKAVGFDKDLATSTMLVHLLCNMHKFEEAFEEFEHMIRQGIKTSIIRKAEAMSEILK

AT1G12775.1 Pentatricopeptide repeat (PPR) superfamily protein1.6e-1227.62Show/hide
Query:  MKKNKISPTIVTYGTLVEGYCRMGSRE-ALGMMERFTVLEQGPTISTYNSLIKG-----------KILKSMIGRGFTPTPTTYNYFFRFFSKYGKIEE-D
        M++  I    V Y  +++G C+ GS + A  +     +      I TYN+LI G           K+L+ MI R  +P   T++     F K GK+ E D
Subjt:  MKKNKISPTIVTYGTLVEGYCRMGSRE-ALGMMERFTVLEQGPTISTYNSLIKG-----------KILKSMIGRGFTPTPTTYNYFFRFFSKYGKIEE-D

Query:  HLLLKML------------------CEEERLNIAIQVCNEMKAVGFDKDLATSTMLVHLLCNMHKFEEAFEEFEHMIRQGI
         LL +M+                  C+E RL  AIQ+ + M + G D D+ T  +L++  C  ++ ++  E F  M  +G+
Subjt:  HLLLKML------------------CEEERLNIAIQVCNEMKAVGFDKDLATSTMLVHLLCNMHKFEEAFEEFEHMIRQGI

AT5G11310.1 Pentatricopeptide repeat (PPR) superfamily protein1.9e-4536.68Show/hide
Query:  MKKNKISPTIVTYGTLVEGYCRMGS------------------------------------REALGMMERFTVLEQGPTISTYNSLIK-----------G
        MK   + PT+VTYGTL+EGYCRM                                       EALGMMERF V E GPTI TYNSL+K            
Subjt:  MKKNKISPTIVTYGTLVEGYCRMGS------------------------------------REALGMMERFTVLEQGPTISTYNSLIK-----------G

Query:  KILKSMIGRGFTPTPTTYNYFFRFFSKYGKIEED-------------------HLLLKMLCEEERLNIAIQVCNEMKAVGFDKDLATSTMLVHLLCNMHK
        KILK M+ RG  PT TTYN+FF++FSK+ K EE                    HL+LKMLCE+ +L++A+QV  EMK  G D DL T+TML+HLLC +  
Subjt:  KILKSMIGRGFTPTPTTYNYFFRFFSKYGKIEED-------------------HLLLKMLCEEERLNIAIQVCNEMKAVGFDKDLATSTMLVHLLCNMHK

Query:  FEEAFEEFEHMIRQGI-------------------------------------------------------KTSIIRKAEAMSEILKVCKYPRELVKRRS
         EEAFEEF++ +R+GI                                                       + SI+ +AEAMS++LK C+ PR+LVK R 
Subjt:  FEEAFEEFEHMIRQGI-------------------------------------------------------KTSIIRKAEAMSEILKVCKYPRELVKRRS

Query:  PSENVVFSANRLIDDIKKK
          +  V     LIDDI ++
Subjt:  PSENVVFSANRLIDDIKKK

AT5G65560.1 Pentatricopeptide repeat (PPR) superfamily protein9.4e-1326.34Show/hide
Query:  MKKNKISPTIVTYGTLVEGYCRMGS-REALGMMERFTVLEQGPTISTYNSLIKG-----------KILKSMIGRGFTPTPTTYNYFF----------RFF
        M ++K+ P I TY  +V GYC++G+  EA   + +       P   TY SLI G           K+   M  +G       Y +               
Subjt:  MKKNKISPTIVTYGTLVEGYCRMGS-REALGMMERFTVLEQGPTISTYNSLIKG-----------KILKSMIGRGFTPTPTTYNYFF----------RFF

Query:  SKYGKIEEDH---------LLLKMLCEEERLNIAIQVCNEMKAVGFDKDLATSTMLVHLLCNMHKFEEAFEEFEHMIRQGIKTSII
          + K+++D          +L+K LC  ER + A+ +  EM+  G   ++ T T+L+  LC+  KFE+A E    M+ +G+  ++I
Subjt:  SKYGKIEEDH---------LLLKMLCEEERLNIAIQVCNEMKAVGFDKDLATSTMLVHLLCNMHKFEEAFEEFEHMIRQGIKTSII


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAAGAACAAAATATCTCCCACTATTGTTACATATGGCACCCTTGTAGAAGGCTATTGTCGAATGGGAAGTCGGGAGGCATTGGGAATGATGGAGCGGTTCACGGT
TTTGGAGCAAGGCCCTACTATCTCAACGTACAATTCTCTTATCAAGGGCAAGATCCTTAAATCGATGATTGGTAGAGGATTCACTCCGACCCCGACTACCTATAACTATT
TCTTCAGATTCTTCTCGAAGTATGGTAAAATTGAGGAGGATCACTTGTTGCTGAAGATGTTATGTGAAGAAGAGAGATTAAACATTGCAATTCAAGTTTGCAATGAAATG
AAGGCTGTAGGGTTTGACAAGGACTTGGCTACAAGCACCATGTTAGTTCATTTGCTTTGCAATATGCATAAATTTGAAGAAGCTTTTGAAGAATTTGAGCACATGATTCG
TCAAGGAATTAAAACATCTATTATTCGTAAAGCTGAGGCAATGTCTGAAATATTGAAGGTCTGTAAATACCCTAGGGAGCTTGTCAAACGTAGAAGTCCCTCTGAAAATG
TTGTATTTAGTGCAAATAGGTTGATAGATGATATCAAGAAGAAAACCAACCCTGTGACTGTTGAACCCATCTACTTAAATTTTGCCGTTGTTGGACATGACGTATGGATG
TTGCTGAAACGCAAGGTTTTTCAACAGAATGATGATGAAACACACAATTGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAGAAGAACAAAATATCTCCCACTATTGTTACATATGGCACCCTTGTAGAAGGCTATTGTCGAATGGGAAGTCGGGAGGCATTGGGAATGATGGAGCGGTTCACGGT
TTTGGAGCAAGGCCCTACTATCTCAACGTACAATTCTCTTATCAAGGGCAAGATCCTTAAATCGATGATTGGTAGAGGATTCACTCCGACCCCGACTACCTATAACTATT
TCTTCAGATTCTTCTCGAAGTATGGTAAAATTGAGGAGGATCACTTGTTGCTGAAGATGTTATGTGAAGAAGAGAGATTAAACATTGCAATTCAAGTTTGCAATGAAATG
AAGGCTGTAGGGTTTGACAAGGACTTGGCTACAAGCACCATGTTAGTTCATTTGCTTTGCAATATGCATAAATTTGAAGAAGCTTTTGAAGAATTTGAGCACATGATTCG
TCAAGGAATTAAAACATCTATTATTCGTAAAGCTGAGGCAATGTCTGAAATATTGAAGGTCTGTAAATACCCTAGGGAGCTTGTCAAACGTAGAAGTCCCTCTGAAAATG
TTGTATTTAGTGCAAATAGGTTGATAGATGATATCAAGAAGAAAACCAACCCTGTGACTGTTGAACCCATCTACTTAAATTTTGCCGTTGTTGGACATGACGTATGGATG
TTGCTGAAACGCAAGGTTTTTCAACAGAATGATGATGAAACACACAATTGTTAG
Protein sequenceShow/hide protein sequence
MKKNKISPTIVTYGTLVEGYCRMGSREALGMMERFTVLEQGPTISTYNSLIKGKILKSMIGRGFTPTPTTYNYFFRFFSKYGKIEEDHLLLKMLCEEERLNIAIQVCNEM
KAVGFDKDLATSTMLVHLLCNMHKFEEAFEEFEHMIRQGIKTSIIRKAEAMSEILKVCKYPRELVKRRSPSENVVFSANRLIDDIKKKTNPVTVEPIYLNFAVVGHDVWM
LLKRKVFQQNDDETHNC