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ClCG05G017590 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG05G017590
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionRING-type domain-containing protein
Genome locationCG_Chr05:29926844..29927292
RNA-Seq ExpressionClCG05G017590
SyntenyClCG05G017590
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6608205.1 putative E3 ubiquitin-protein ligase HIP1, partial [Cucurbita argyrosperma subsp. sororia]6.7e-2879.57Show/hide
Query:  MTYPEPEGYGQSLHVNGQATPAEVGLSSTSTNVNSFRCHNGDGIAEVLLALERIEQ-EELTYEACNQAILLETSMFLNSLNIYDQHRDMRRDI
        MTYPEPE Y QS+H  G+ATP E  +SST TN+NSFRCHN  GIAEVLLALERIEQ EELTYE   QAILLETSMFLNSLNIYDQHRDMR DI
Subjt:  MTYPEPEGYGQSLHVNGQATPAEVGLSSTSTNVNSFRCHNGDGIAEVLLALERIEQ-EELTYEACNQAILLETSMFLNSLNIYDQHRDMRRDI

KAG7037563.1 putative E3 ubiquitin-protein ligase HIP1 [Cucurbita argyrosperma subsp. argyrosperma]6.7e-2879.57Show/hide
Query:  MTYPEPEGYGQSLHVNGQATPAEVGLSSTSTNVNSFRCHNGDGIAEVLLALERIEQ-EELTYEACNQAILLETSMFLNSLNIYDQHRDMRRDI
        MTYPEPE Y QS+H  G+ATP E  +SST TN+NSFRCHN  GIAEVLLALERIEQ EELTYE   QAILLETSMFLNSLNIYDQHRDMR DI
Subjt:  MTYPEPEGYGQSLHVNGQATPAEVGLSSTSTNVNSFRCHNGDGIAEVLLALERIEQ-EELTYEACNQAILLETSMFLNSLNIYDQHRDMRRDI

XP_004136311.1 uncharacterized protein LOC101218753 [Cucumis sativus]3.3e-2779.35Show/hide
Query:  TYPEPEGYGQSLHVNGQATPAEVGLSSTSTNVNSFRCHNGDGIAEVLLALERIEQ-EELTYEACNQAILLETSMFLNSLNIYDQHRDMRRDI
        T P+PEGY Q LH   QAT AEVGLSSTSTN + FRCHN DGIAEVLLALERIEQ EELTYE   Q ILLETS+FLNSLNIYDQHRDMR DI
Subjt:  TYPEPEGYGQSLHVNGQATPAEVGLSSTSTNVNSFRCHNGDGIAEVLLALERIEQ-EELTYEACNQAILLETSMFLNSLNIYDQHRDMRRDI

XP_022981972.1 uncharacterized protein LOC111480963 [Cucurbita maxima]2.5e-2779.57Show/hide
Query:  MTYPEPEGYGQSLHVNGQATPAEVGLSSTSTNVNSFRCHNGDGIAEVLLALERIEQ-EELTYEACNQAILLETSMFLNSLNIYDQHRDMRRDI
        MTYPEPE Y QS+H  G+ATP EV +SST TN+NSFRCHN  GIAEVLLALERIEQ EELTYE   QAILLETSMFLNSLNI DQHRDMR DI
Subjt:  MTYPEPEGYGQSLHVNGQATPAEVGLSSTSTNVNSFRCHNGDGIAEVLLALERIEQ-EELTYEACNQAILLETSMFLNSLNIYDQHRDMRRDI

XP_038898034.1 uncharacterized protein LOC120085870 [Benincasa hispida]9.3e-3081.52Show/hide
Query:  TYPEPEGYGQSLHVNGQATPAEVGLSSTSTNVNSFRCHNGDGIAEVLLALERIEQ-EELTYEACNQAILLETSMFLNSLNIYDQHRDMRRDI
        TYPEPEGY QSL   GQATPAEVG+SS STN NS+RCHN DGIAEVLLALERIEQ EELTYE   QA+LLET+M LNSLNIYDQHRDMR DI
Subjt:  TYPEPEGYGQSLHVNGQATPAEVGLSSTSTNVNSFRCHNGDGIAEVLLALERIEQ-EELTYEACNQAILLETSMFLNSLNIYDQHRDMRRDI

TrEMBL top hitse value%identityAlignment
A0A6J1FF39 uncharacterized RING finger protein P4H10.07-like isoform X13.0e-2675Show/hide
Query:  MTYPEPEGYGQSLHVNGQATPAEVGLSSTSTNVNSFRCHNGDGIAEVLLALERIEQEELTYEACNQAILLETSMFLNSLNIYDQHRDMRRDI
        MTYPEPEGY +SLH       AE G+S+TSTNVNSFRC N +GIAEVLLALERIE+EE TYE   QAILLETS FLN LNIYDQHRDMR DI
Subjt:  MTYPEPEGYGQSLHVNGQATPAEVGLSSTSTNVNSFRCHNGDGIAEVLLALERIEQEELTYEACNQAILLETSMFLNSLNIYDQHRDMRRDI

A0A6J1FKJ9 uncharacterized protein LOC1114461151.8e-2677.42Show/hide
Query:  MTYPEPEGYGQSLHVNGQATPAEVGLSSTSTNVNSFRCHNGDGIAEVLLALERIEQ-EELTYEACNQAILLETSMFLNSLNIYDQHRDMRRDI
        M YPEPE Y QS+H  G+ATP E  +SST TN+NSFRCHN  GIAEVLLALERIEQ EELTYE   QAILLETSMFLNSLNI DQHRDMR DI
Subjt:  MTYPEPEGYGQSLHVNGQATPAEVGLSSTSTNVNSFRCHNGDGIAEVLLALERIEQ-EELTYEACNQAILLETSMFLNSLNIYDQHRDMRRDI

A0A6J1IHM8 uncharacterized protein LOC111476272 isoform X14.7e-2777.17Show/hide
Query:  MTYPEPEGYGQSLHVNGQATPAEVGLSSTSTNVNSFRCHNGDGIAEVLLALERIEQEELTYEACNQAILLETSMFLNSLNIYDQHRDMRRDI
        MTYPEPEGYGQSLH       AE G+SSTSTNVNSFRC N +GIAEVLLALERIE+EE TYE   QAILLE S FLN LNIYDQHRDMR DI
Subjt:  MTYPEPEGYGQSLHVNGQATPAEVGLSSTSTNVNSFRCHNGDGIAEVLLALERIEQEELTYEACNQAILLETSMFLNSLNIYDQHRDMRRDI

A0A6J1IK84 uncharacterized protein LOC111476272 isoform X22.3e-2676.09Show/hide
Query:  MTYPEPEGYGQSLHVNGQATPAEVGLSSTSTNVNSFRCHNGDGIAEVLLALERIEQEELTYEACNQAILLETSMFLNSLNIYDQHRDMRRDI
        MTYPEPEGYGQSLH       AE G+SSTSTNVNSFRC N +GIAEVLLALERIE+EE TYE    AILLE S FLN LNIYDQHRDMR DI
Subjt:  MTYPEPEGYGQSLHVNGQATPAEVGLSSTSTNVNSFRCHNGDGIAEVLLALERIEQEELTYEACNQAILLETSMFLNSLNIYDQHRDMRRDI

A0A6J1J3B4 uncharacterized protein LOC1114809631.2e-2779.57Show/hide
Query:  MTYPEPEGYGQSLHVNGQATPAEVGLSSTSTNVNSFRCHNGDGIAEVLLALERIEQ-EELTYEACNQAILLETSMFLNSLNIYDQHRDMRRDI
        MTYPEPE Y QS+H  G+ATP EV +SST TN+NSFRCHN  GIAEVLLALERIEQ EELTYE   QAILLETSMFLNSLNI DQHRDMR DI
Subjt:  MTYPEPEGYGQSLHVNGQATPAEVGLSSTSTNVNSFRCHNGDGIAEVLLALERIEQ-EELTYEACNQAILLETSMFLNSLNIYDQHRDMRRDI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G31450.1 RING/U-box superfamily protein1.0e-1049.3Show/hide
Query:  EVGLSSTSTNVNSFRCHNGDGIAEVLLALERIEQE-ELTYEACNQAILLETSMFLNSLNIYDQHRDMRRDI
        E GLS +  + +SFR +N DGI+E+L  L+RIEQ+ EL YE     +++ET + L  L+ +DQHRDMR DI
Subjt:  EVGLSSTSTNVNSFRCHNGDGIAEVLLALERIEQE-ELTYEACNQAILLETSMFLNSLNIYDQHRDMRRDI

AT5G10650.1 RING/U-box superfamily protein3.6e-1150Show/hide
Query:  LHVNGQATPAEVGLSSTSTNVNSFRCHNGDGIAEVLLALERIE-QEELTYEACNQAILLETSMFLNSL-NIYDQHRDMRRDI
        +H N   +P E   SS+  N +    +N +GIAEVLLALERIE  EELTYE   Q   +ET++F + +   YDQHRDMR DI
Subjt:  LHVNGQATPAEVGLSSTSTNVNSFRCHNGDGIAEVLLALERIE-QEELTYEACNQAILLETSMFLNSL-NIYDQHRDMRRDI

AT5G10650.2 RING/U-box superfamily protein3.6e-1150Show/hide
Query:  LHVNGQATPAEVGLSSTSTNVNSFRCHNGDGIAEVLLALERIE-QEELTYEACNQAILLETSMFLNSL-NIYDQHRDMRRDI
        +H N   +P E   SS+  N +    +N +GIAEVLLALERIE  EELTYE   Q   +ET++F + +   YDQHRDMR DI
Subjt:  LHVNGQATPAEVGLSSTSTNVNSFRCHNGDGIAEVLLALERIE-QEELTYEACNQAILLETSMFLNSL-NIYDQHRDMRRDI

AT5G24870.1 RING/U-box superfamily protein1.2e-1450.54Show/hide
Query:  YGQSLHVNGQ-------ATPAEVGLSSTSTNVNSFRCHNGDGIAEVLLALERIEQ-EELTYEACNQAILLETSMFLNSL-NIYDQHRDMRRDI
        Y + +  NG+        +P+E GLS +  N ++FR +N +G+AEVLLALERIEQ EELTYE   Q  +LET++FLN + + +DQHRDMR DI
Subjt:  YGQSLHVNGQ-------ATPAEVGLSSTSTNVNSFRCHNGDGIAEVLLALERIEQ-EELTYEACNQAILLETSMFLNSL-NIYDQHRDMRRDI

AT5G24870.2 RING/U-box superfamily protein1.2e-1450.54Show/hide
Query:  YGQSLHVNGQ-------ATPAEVGLSSTSTNVNSFRCHNGDGIAEVLLALERIEQ-EELTYEACNQAILLETSMFLNSL-NIYDQHRDMRRDI
        Y + +  NG+        +P+E GLS +  N ++FR +N +G+AEVLLALERIEQ EELTYE   Q  +LET++FLN + + +DQHRDMR DI
Subjt:  YGQSLHVNGQ-------ATPAEVGLSSTSTNVNSFRCHNGDGIAEVLLALERIEQ-EELTYEACNQAILLETSMFLNSL-NIYDQHRDMRRDI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTTACCCTGAACCAGAAGGCTATGGTCAAAGTCTACATGTCAATGGACAAGCTACTCCTGCAGAAGTTGGTCTTTCAAGCACTTCAACAAATGTTAACAGTTTTAG
ATGCCACAATGGCGATGGAATTGCTGAGGTACTATTGGCGTTGGAGAGAATTGAACAGGAGGAGCTAACTTACGAGGCATGTAATCAAGCCATTCTTCTTGAGACGAGTA
TGTTCCTCAACAGCCTGAATATCTATGATCAGCACAGAGACATGAGGAGAGACATAAGGCTTGACATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGACTTACCCTGAACCAGAAGGCTATGGTCAAAGTCTACATGTCAATGGACAAGCTACTCCTGCAGAAGTTGGTCTTTCAAGCACTTCAACAAATGTTAACAGTTTTAG
ATGCCACAATGGCGATGGAATTGCTGAGGTACTATTGGCGTTGGAGAGAATTGAACAGGAGGAGCTAACTTACGAGGCATGTAATCAAGCCATTCTTCTTGAGACGAGTA
TGTTCCTCAACAGCCTGAATATCTATGATCAGCACAGAGACATGAGGAGAGACATAAGGCTTGACATTTGA
Protein sequenceShow/hide protein sequence
MTYPEPEGYGQSLHVNGQATPAEVGLSSTSTNVNSFRCHNGDGIAEVLLALERIEQEELTYEACNQAILLETSMFLNSLNIYDQHRDMRRDIRLDI