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ClCG05G017710 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG05G017710
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionNADH dehydrogenase [ubiquinone] iron-sulfur protein 2
Genome locationCG_Chr05:30111997..30114235
RNA-Seq ExpressionClCG05G017710
SyntenyClCG05G017710
Gene Ontology termsGO:0006120 - mitochondrial electron transport, NADH to ubiquinone (biological process)
GO:0005747 - mitochondrial respiratory chain complex I (cellular component)
GO:0008137 - NADH dehydrogenase (ubiquinone) activity (molecular function)
GO:0048038 - quinone binding (molecular function)
GO:0051287 - NAD binding (molecular function)
InterPro domainsIPR001135 - NADH-quinone oxidoreductase, subunit D
IPR029014 - [NiFe]-hydrogenase, large subunit


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAF2270536.1 unnamed protein product [Brassica napus]1.3e-0992.86Show/hide
Query:  MTTGSSSVYSTSIHHFELYTEGFSVPASSTYTAVEAPKGAVG
        MTTG SSVYSTSIHHFELYTEGFSVPASSTYTAVEAPKG  G
Subjt:  MTTGSSSVYSTSIHHFELYTEGFSVPASSTYTAVEAPKGAVG

KAF7117258.1 hypothetical protein RHSIM_RhsimMtG0002000 [Rhododendron simsii]1.3e-0992.86Show/hide
Query:  MTTGSSSVYSTSIHHFELYTEGFSVPASSTYTAVEAPKGAVG
        MTTG SSVYSTSIHHFELYTEGFSVPASSTYTAVEAPKG  G
Subjt:  MTTGSSSVYSTSIHHFELYTEGFSVPASSTYTAVEAPKGAVG

KAG6591454.1 hypothetical protein SDJN03_13800, partial [Cucurbita argyrosperma subsp. sororia]1.0e-1787.14Show/hide
Query:  EILKAMAAVSKASFMALVVVLFAVFSIAVAQSAESPAPAPASPAISVVPSLSVACVGAFVALLFGSALKA
        EI +AMAAVSK SFMALV VLF V S+AVAQSAESPAPAPASPA SVVPSLSVACVGAFVAL+FGSALKA
Subjt:  EILKAMAAVSKASFMALVVVLFAVFSIAVAQSAESPAPAPASPAISVVPSLSVACVGAFVALLFGSALKA

KAG7024335.1 hypothetical protein SDJN02_13149, partial [Cucurbita argyrosperma subsp. argyrosperma]7.7e-1880.52Show/hide
Query:  FNTFAVVEILKAMAAVSKASFMALVVVLFAVFSIAVAQSAESPAPAPASPAISVVPSLSVACVGAFVALLFGSALKA
        F     +EI +AMAAVSK SFMALV VLF V S+AVAQSAESPAPAPASPA SVVPSLSVACVGAFVAL+FGSALKA
Subjt:  FNTFAVVEILKAMAAVSKASFMALVVVLFAVFSIAVAQSAESPAPAPASPAISVVPSLSVACVGAFVALLFGSALKA

KGN55315.1 hypothetical protein Csa_012200 [Cucumis sativus]2.7e-1587.69Show/hide
Query:  MAAVSKASFMALVVVLFAVFSIAVAQSAESPAPAPASPAISVVPSLSVACVGAFVALLFGSALKA
        MAAVSK SFMALV VLFAV S+AVAQSAESPAP PASPA SVVPSLS ACVGAF+ALLFGSALKA
Subjt:  MAAVSKASFMALVVVLFAVFSIAVAQSAESPAPAPASPAISVVPSLSVACVGAFVALLFGSALKA

TrEMBL top hitse value%identityAlignment
A0A0V0H7K6 Putative ovule protein6.3e-1092.86Show/hide
Query:  MTTGSSSVYSTSIHHFELYTEGFSVPASSTYTAVEAPKGAVG
        MTTG SSVYSTSIHHFELYTEGFSVPASSTYTAVEAPKG  G
Subjt:  MTTGSSSVYSTSIHHFELYTEGFSVPASSTYTAVEAPKGAVG

A0A3P6GFR2 Complex1_49kDa domain-containing protein6.3e-1092.86Show/hide
Query:  MTTGSSSVYSTSIHHFELYTEGFSVPASSTYTAVEAPKGAVG
        MTTG SSVYSTSIHHFELYTEGFSVPASSTYTAVEAPKG  G
Subjt:  MTTGSSSVYSTSIHHFELYTEGFSVPASSTYTAVEAPKGAVG

A0A650GC80 Complex1_49kDa domain-containing protein6.3e-1092.86Show/hide
Query:  MTTGSSSVYSTSIHHFELYTEGFSVPASSTYTAVEAPKGAVG
        MTTG SSVYSTSIHHFELYTEGFSVPASSTYTAVEAPKG  G
Subjt:  MTTGSSSVYSTSIHHFELYTEGFSVPASSTYTAVEAPKGAVG

B9TA68 NADH-ubiquinone oxidoreductase fe-s protein, putative6.3e-1092.86Show/hide
Query:  MTTGSSSVYSTSIHHFELYTEGFSVPASSTYTAVEAPKGAVG
        MTTG SSVYSTSIHHFELYTEGFSVPASSTYTAVEAPKG  G
Subjt:  MTTGSSSVYSTSIHHFELYTEGFSVPASSTYTAVEAPKGAVG

Q96504 CRG161.3e-1587.69Show/hide
Query:  MAAVSKASFMALVVVLFAVFSIAVAQSAESPAPAPASPAISVVPSLSVACVGAFVALLFGSALKA
        MAAVSK SFMALV VLFAV S+AVAQSAESPAP PASPA SVVPSLS ACVGAF+ALLFGSALKA
Subjt:  MAAVSKASFMALVVVLFAVFSIAVAQSAESPAPAPASPAISVVPSLSVACVGAFVALLFGSALKA

SwissProt top hitse value%identityAlignment
A5FX11 NADH-quinone oxidoreductase subunit D5.4e-0676.67Show/hide
Query:  IHHFELYTEGFSVPASSTYTAVEAPKGAVG
        IHHF+LYTEG+ VPA +TYTAVEAPKG  G
Subjt:  IHHFELYTEGFSVPASSTYTAVEAPKGAVG

B6ISX8 NADH-quinone oxidoreductase subunit D1.6e-0573.33Show/hide
Query:  IHHFELYTEGFSVPASSTYTAVEAPKGAVG
        IHHF+LYTEG+ VPA  TYTAVE+PKG  G
Subjt:  IHHFELYTEGFSVPASSTYTAVEAPKGAVG

O21270 NADH-ubiquinone oxidoreductase 49 kDa subunit7.0e-0676.67Show/hide
Query:  IHHFELYTEGFSVPASSTYTAVEAPKGAVG
        IHHF+LYTEG+SVP   TYTAVEAPKG  G
Subjt:  IHHFELYTEGFSVPASSTYTAVEAPKGAVG

P93306 NADH dehydrogenase [ubiquinone] iron-sulfur protein 21.2e-0890.62Show/hide
Query:  TSIHHFELYTEGFSVPASSTYTAVEAPKGAVG
        +SIHHFELYTEGFSVPASSTYTAVEAPKG  G
Subjt:  TSIHHFELYTEGFSVPASSTYTAVEAPKGAVG

Q36450 NADH dehydrogenase [ubiquinone] iron-sulfur protein 22.8e-0784.38Show/hide
Query:  TSIHHFELYTEGFSVPASSTYTAVEAPKGAVG
        +SIHHFE YTEGFSVPA STYTAVEAPKG  G
Subjt:  TSIHHFELYTEGFSVPASSTYTAVEAPKGAVG

Arabidopsis top hitse value%identityAlignment
ATMG00510.1 NADH dehydrogenase subunit 78.2e-1090.62Show/hide
Query:  TSIHHFELYTEGFSVPASSTYTAVEAPKGAVG
        +SIHHFELYTEGFSVPASSTYTAVEAPKG  G
Subjt:  TSIHHFELYTEGFSVPASSTYTAVEAPKGAVG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTACAGGATCATCATCGGTCTACTCTACCTCAATTCACCATTTCGAACTTTATACAGAAGGTTTTTCCGTACCAGCTTCTTCTACCTATACCGCAGTGGAAGCACC
TAAAGGGGCGGTAGGGGATATATCGAGGCGGGGTCGGGGTAGGGATACTCTCCCCGTCCCTGCCCCGACCCTGGACGGGTACCCGGGGAATCTCTCCGGTTTGACCCTCA
TCCCCGATCAAACTGGGGATTCCCTGCCCGATCAGTGCGTTGTAAAATCCCAGCACGACAACCGTCCAAATTCACAACATTCATGCGTCATCATACACCCGCCACTCTTT
CTTTCGCCAAAAACAGCCTCTACGCTTACGTTTCATCAGTTCAACACTTTCGCCGTAGTTGAAATTCTCAAAGCAATGGCCGCCGTTTCTAAGGCTTCTTTCATGGCTCT
TGTAGTTGTCTTGTTCGCCGTCTTCTCCATTGCCGTCGCTCAATCTGCAGAGTCTCCCGCTCCTGCTCCGGCTTCTCCTGCTATCTCTGTTGTCCCGTCGTTGAGCGTCG
CTTGCGTTGGTGCTTTTGTTGCTCTCCTCTTTGGATCTGCACTCAAGGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGACTACAGGATCATCATCGGTCTACTCTACCTCAATTCACCATTTCGAACTTTATACAGAAGGTTTTTCCGTACCAGCTTCTTCTACCTATACCGCAGTGGAAGCACC
TAAAGGGGCGGTAGGGGATATATCGAGGCGGGGTCGGGGTAGGGATACTCTCCCCGTCCCTGCCCCGACCCTGGACGGGTACCCGGGGAATCTCTCCGGTTTGACCCTCA
TCCCCGATCAAACTGGGGATTCCCTGCCCGATCAGTGCGTTGTAAAATCCCAGCACGACAACCGTCCAAATTCACAACATTCATGCGTCATCATACACCCGCCACTCTTT
CTTTCGCCAAAAACAGCCTCTACGCTTACGTTTCATCAGTTCAACACTTTCGCCGTAGTTGAAATTCTCAAAGCAATGGCCGCCGTTTCTAAGGCTTCTTTCATGGCTCT
TGTAGTTGTCTTGTTCGCCGTCTTCTCCATTGCCGTCGCTCAATCTGCAGAGTCTCCCGCTCCTGCTCCGGCTTCTCCTGCTATCTCTGTTGTCCCGTCGTTGAGCGTCG
CTTGCGTTGGTGCTTTTGTTGCTCTCCTCTTTGGATCTGCACTCAAGGCTTGA
Protein sequenceShow/hide protein sequence
MTTGSSSVYSTSIHHFELYTEGFSVPASSTYTAVEAPKGAVGDISRRGRGRDTLPVPAPTLDGYPGNLSGLTLIPDQTGDSLPDQCVVKSQHDNRPNSQHSCVIIHPPLF
LSPKTASTLTFHQFNTFAVVEILKAMAAVSKASFMALVVVLFAVFSIAVAQSAESPAPAPASPAISVVPSLSVACVGAFVALLFGSALKA