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ClCG05G017840 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG05G017840
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionUnknown protein
Genome locationCG_Chr05:30191408..30195970
RNA-Seq ExpressionClCG05G017840
SyntenyClCG05G017840
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_038897218.1 uncharacterized protein LOC120085348 [Benincasa hispida]3.9e-1274.55Show/hide
Query:  LTSLPAVLVLHLYCTFGYYLDHELLKVMAGQRGPSPQIVHYISVSTLDYFC--CF
        + SLPAVLVLHLY TFGY L HELL+ MAGQRGPS Q V+Y SV TLDYFC  CF
Subjt:  LTSLPAVLVLHLYCTFGYYLDHELLKVMAGQRGPSPQIVHYISVSTLDYFC--CF
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTTTCCGGCGGTTTGCAACTTTGCTAGGGCAAACCTGGGGATCGTGGAGGCATCCGGTTGGAGAACCGGCTGCGTAATGGTCGAATCTTCTACGCATTTGAGGCA
TGATTCGTCCTCGTCGTCACTTTTAGTCATTGCACGCTTAGAGTTCTTGAATCGGATTCAATACGAGCCTCTCGGCGAATTGGGGATAGACAGGTCCGATCATGAGTTCT
TGTCGCGCCGAACAGCAGCGGTGGATGTCTGCGGAAATTTGACGAGTCTACCTGCAGTTCTTGTTCTGCATTTGTACTGTACATTTGGGTACTATTTAGATCATGAGCTG
CTTAAGGTTATGGCGGGTCAGAGGGGACCATCACCACAAATTGTGCATTATATCAGTGTCAGCACGTTGGACTATTTCTGCTGCTTCCGGCATGCTCCCTTTCATTCGGA
AGGATATCAATTGCTCCAGTTCAGAATGGAGAAGGTGACTGATCCACGACTATATCCTGTAGACGGTCGAGAGGAAGGTGAAAATGGAATTGAACCGACAGATATGGGGG
ACCCAATTGATAAATTTCATGAGGAGGATCGAGATGGCGTCATTGACTTGAGAAGAGAAAGGAAAGGGAAGAGAGACAAAAGAGTTAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATTTTCCGGCGGTTTGCAACTTTGCTAGGGCAAACCTGGGGATCGTGGAGGCATCCGGTTGGAGAACCGGCTGCGTAATGGTCGAATCTTCTACGCATTTGAGGCA
TGATTCGTCCTCGTCGTCACTTTTAGTCATTGCACGCTTAGAGTTCTTGAATCGGATTCAATACGAGCCTCTCGGCGAATTGGGGATAGACAGGTCCGATCATGAGTTCT
TGTCGCGCCGAACAGCAGCGGTGGATGTCTGCGGAAATTTGACGAGTCTACCTGCAGTTCTTGTTCTGCATTTGTACTGTACATTTGGGTACTATTTAGATCATGAGCTG
CTTAAGGTTATGGCGGGTCAGAGGGGACCATCACCACAAATTGTGCATTATATCAGTGTCAGCACGTTGGACTATTTCTGCTGCTTCCGGCATGCTCCCTTTCATTCGGA
AGGATATCAATTGCTCCAGTTCAGAATGGAGAAGGTGACTGATCCACGACTATATCCTGTAGACGGTCGAGAGGAAGGTGAAAATGGAATTGAACCGACAGATATGGGGG
ACCCAATTGATAAATTTCATGAGGAGGATCGAGATGGCGTCATTGACTTGAGAAGAGAAAGGAAAGGGAAGAGAGACAAAAGAGTTAATTGA
Protein sequenceShow/hide protein sequence
MDFPAVCNFARANLGIVEASGWRTGCVMVESSTHLRHDSSSSSLLVIARLEFLNRIQYEPLGELGIDRSDHEFLSRRTAAVDVCGNLTSLPAVLVLHLYCTFGYYLDHEL
LKVMAGQRGPSPQIVHYISVSTLDYFCCFRHAPFHSEGYQLLQFRMEKVTDPRLYPVDGREEGENGIEPTDMGDPIDKFHEEDRDGVIDLRRERKGKRDKRVN