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ClCG05G018360 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG05G018360
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionMyb_DNA-bind_3 domain-containing protein
Genome locationCG_Chr05:30618393..30622870
RNA-Seq ExpressionClCG05G018360
SyntenyClCG05G018360
Gene Ontology termsGO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EXB70651.1 hypothetical protein L484_023837 [Morus notabilis]1.3e-1370.18Show/hide
Query:  DLTIDDSCAIGFDRGEELGAQHRSEIIKVEDCPIYEQLYTIFTESDAAGKYARSSHY
        D T+D SC IGFD  E+LGAQ R E +KV+DCPIYEQL TIFT+S A GKYA+SSHY
Subjt:  DLTIDDSCAIGFDRGEELGAQHRSEIIKVEDCPIYEQLYTIFTESDAAGKYARSSHY

PON56685.1 Myb/SANT-like domain containing protein [Parasponia andersonii]1.3e-1365.52Show/hide
Query:  DLTIDDSCAIGFDRGEELGAQHRSEIIKVEDCPIYEQLYTIFTESDAAGKYARSSHYK
        D T+D+SC +GFD  E++GAQ R E IK +DCPIYEQL TIFT+S A GKYA+SSHY+
Subjt:  DLTIDDSCAIGFDRGEELGAQHRSEIIKVEDCPIYEQLYTIFTESDAAGKYARSSHYK

PON87492.1 Myb/SANT-like domain containing protein [Trema orientale]4.4e-1467.24Show/hide
Query:  DLTIDDSCAIGFDRGEELGAQHRSEIIKVEDCPIYEQLYTIFTESDAAGKYARSSHYK
        D T+D+SC +GFD  E++GAQ R E IKV+DCPIYEQL TIFT+S A GKYA+SSHY+
Subjt:  DLTIDDSCAIGFDRGEELGAQHRSEIIKVEDCPIYEQLYTIFTESDAAGKYARSSHYK

XP_024022243.1 L10-interacting MYB domain-containing protein [Morus notabilis]1.3e-1370.18Show/hide
Query:  DLTIDDSCAIGFDRGEELGAQHRSEIIKVEDCPIYEQLYTIFTESDAAGKYARSSHY
        D T+D SC IGFD  E+LGAQ R E +KV+DCPIYEQL TIFT+S A GKYA+SSHY
Subjt:  DLTIDDSCAIGFDRGEELGAQHRSEIIKVEDCPIYEQLYTIFTESDAAGKYARSSHY

XP_027330350.1 L10-interacting MYB domain-containing protein-like [Abrus precatorius]7.6e-1468.97Show/hide
Query:  DLTIDDSCAIGFDRGEELGAQHRSEIIKVEDCPIYEQLYTIFTESDAAGKYARSSHYK
        D  IDDSC IGFD+ E+LGAQ R E +KV+DCPIYEQL TIF +S A GKYA+SSHY+
Subjt:  DLTIDDSCAIGFDRGEELGAQHRSEIIKVEDCPIYEQLYTIFTESDAAGKYARSSHYK

TrEMBL top hitse value%identityAlignment
A0A2C9UYZ4 Uncharacterized protein3.7e-1462.3Show/hide
Query:  LERDLTIDDSCAIGFDRGEELGAQHRSEIIKVEDCPIYEQLYTIFTESDAAGKYARSSHYK
        ++ D  IDDSC IGFD  E++GAQ R E +KV+DCPIYEQL TIFT++ A GKYA+SSH++
Subjt:  LERDLTIDDSCAIGFDRGEELGAQHRSEIIKVEDCPIYEQLYTIFTESDAAGKYARSSHYK

A0A2P5C6Q1 Myb/SANT-like domain containing protein6.2e-1465.52Show/hide
Query:  DLTIDDSCAIGFDRGEELGAQHRSEIIKVEDCPIYEQLYTIFTESDAAGKYARSSHYK
        D T+D+SC +GFD  E++GAQ R E IK +DCPIYEQL TIFT+S A GKYA+SSHY+
Subjt:  DLTIDDSCAIGFDRGEELGAQHRSEIIKVEDCPIYEQLYTIFTESDAAGKYARSSHYK

A0A2P5EPQ3 Myb/SANT-like domain containing protein2.1e-1467.24Show/hide
Query:  DLTIDDSCAIGFDRGEELGAQHRSEIIKVEDCPIYEQLYTIFTESDAAGKYARSSHYK
        D T+D+SC +GFD  E++GAQ R E IKV+DCPIYEQL TIFT+S A GKYA+SSHY+
Subjt:  DLTIDDSCAIGFDRGEELGAQHRSEIIKVEDCPIYEQLYTIFTESDAAGKYARSSHYK

A0A6P4AUQ2 L10-interacting MYB domain-containing protein-like isoform X28.2e-1468.97Show/hide
Query:  DLTIDDSCAIGFDRGEELGAQHRSEIIKVEDCPIYEQLYTIFTESDAAGKYARSSHYK
        D TIDDSC IGFD  E++ AQ R E IKV+DCPIYEQL TIFT+S   GKYA+SSHY+
Subjt:  DLTIDDSCAIGFDRGEELGAQHRSEIIKVEDCPIYEQLYTIFTESDAAGKYARSSHYK

W9RFR5 Uncharacterized protein6.2e-1470.18Show/hide
Query:  DLTIDDSCAIGFDRGEELGAQHRSEIIKVEDCPIYEQLYTIFTESDAAGKYARSSHY
        D T+D SC IGFD  E+LGAQ R E +KV+DCPIYEQL TIFT+S A GKYA+SSHY
Subjt:  DLTIDDSCAIGFDRGEELGAQHRSEIIKVEDCPIYEQLYTIFTESDAAGKYARSSHY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGAAGATATGACCAAAACAAAATTTCAAAACAAGAATTTCGAGTTAGGCCATGATTGCACACATGATGTCAGCAATCATGGACATGAGGTCAATGACCATGCACA
TGACGTTAGCGATCGCATACGTAGGGACTGGAGAGCTTGGAAAGGAGCTTACCGCTCCCCGCCGTCGCGGTTCCCCTTTTCCGTTGAGGAAGCATTTGGATGTCTTGAGC
GTGACCTCACCATTGATGATTCATGTGCTATTGGGTTTGATCGGGGGGAAGAACTTGGGGCCCAGCATCGATCTGAGATAATCAAAGTCGAGGACTGTCCCATATATGAG
CAGCTGTACACAATATTCACAGAATCAGATGCTGCTGGGAAGTATGCACGATCCAGCCACTACAAATAG
mRNA sequenceShow/hide mRNA sequence
ATGGATGAAGATATGACCAAAACAAAATTTCAAAACAAGAATTTCGAGTTAGGCCATGATTGCACACATGATGTCAGCAATCATGGACATGAGGTCAATGACCATGCACA
TGACGTTAGCGATCGCATACGTAGGGACTGGAGAGCTTGGAAAGGAGCTTACCGCTCCCCGCCGTCGCGGTTCCCCTTTTCCGTTGAGGAAGCATTTGGATGTCTTGAGC
GTGACCTCACCATTGATGATTCATGTGCTATTGGGTTTGATCGGGGGGAAGAACTTGGGGCCCAGCATCGATCTGAGATAATCAAAGTCGAGGACTGTCCCATATATGAG
CAGCTGTACACAATATTCACAGAATCAGATGCTGCTGGGAAGTATGCACGATCCAGCCACTACAAATAG
Protein sequenceShow/hide protein sequence
MDEDMTKTKFQNKNFELGHDCTHDVSNHGHEVNDHAHDVSDRIRRDWRAWKGAYRSPPSRFPFSVEEAFGCLERDLTIDDSCAIGFDRGEELGAQHRSEIIKVEDCPIYE
QLYTIFTESDAAGKYARSSHYK