; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

ClCG05G018470 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG05G018470
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionAuxin responsive SAUR protein
Genome locationCG_Chr05:30734979..30736031
RNA-Seq ExpressionClCG05G018470
SyntenyClCG05G018470
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7024163.1 Auxin-responsive protein SAUR50, partial [Cucurbita argyrosperma subsp. argyrosperma]2.2e-4597.87Show/hide
Query:  MSAGLGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVQAEEEYGFTNQGPLAIPCEESI
        MSAGLGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVQAEEEYGFTNQGPLAIPC+ES+
Subjt:  MSAGLGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVQAEEEYGFTNQGPLAIPCEESI

XP_022138000.1 auxin-induced protein 6B-like [Momordica charantia]6.3e-4596.81Show/hide
Query:  MSAGLGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVQAEEEYGFTNQGPLAIPCEESI
        MSAG GKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVQAEEEYGFTNQGPLAIPC+ES+
Subjt:  MSAGLGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVQAEEEYGFTNQGPLAIPCEESI

XP_022936801.1 auxin-induced protein 6B [Cucurbita moschata]2.2e-4597.87Show/hide
Query:  MSAGLGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVQAEEEYGFTNQGPLAIPCEESI
        MSAGLGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVQAEEEYGFTNQGPLAIPC+ES+
Subjt:  MSAGLGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVQAEEEYGFTNQGPLAIPCEESI

XP_023535898.1 auxin-induced protein 6B [Cucurbita pepo subsp. pepo]4.8e-4596.81Show/hide
Query:  MSAGLGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVQAEEEYGFTNQGPLAIPCEESI
        MSAG+GKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVQAEEEYGFTNQGPLAIPC+ES+
Subjt:  MSAGLGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVQAEEEYGFTNQGPLAIPCEESI

XP_038899268.1 auxin-induced protein 6B-like [Benincasa hispida]1.3e-4597.87Show/hide
Query:  MSAGLGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVQAEEEYGFTNQGPLAIPCEESI
        MSAGLGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSCRRFVVRATYLNHP+FKKLLVQAEEEYGFTNQGPLAIPCEES+
Subjt:  MSAGLGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVQAEEEYGFTNQGPLAIPCEESI

TrEMBL top hitse value%identityAlignment
A0A1R3HYE5 Auxin responsive SAUR protein5.2e-4596.81Show/hide
Query:  MSAGLGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVQAEEEYGFTNQGPLAIPCEESI
        MSAGLGKCSKIRHIVRLRQMLRRWRNKARMSA RIPSDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVQAEEEYGFTNQGPLAIPC+ES+
Subjt:  MSAGLGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVQAEEEYGFTNQGPLAIPCEESI

A0A1R3KA81 Auxin responsive SAUR protein5.2e-4596.81Show/hide
Query:  MSAGLGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVQAEEEYGFTNQGPLAIPCEESI
        MSAGLGKCSKIRHIVRLRQMLRRWRNKARMSA RIPSDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVQAEEEYGFTNQGPLAIPC+ES+
Subjt:  MSAGLGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVQAEEEYGFTNQGPLAIPCEESI

A0A6J1C879 auxin-induced protein 6B-like3.1e-4596.81Show/hide
Query:  MSAGLGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVQAEEEYGFTNQGPLAIPCEESI
        MSAG GKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVQAEEEYGFTNQGPLAIPC+ES+
Subjt:  MSAGLGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVQAEEEYGFTNQGPLAIPCEESI

A0A6J1F8H9 auxin-induced protein 6B1.1e-4597.87Show/hide
Query:  MSAGLGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVQAEEEYGFTNQGPLAIPCEESI
        MSAGLGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVQAEEEYGFTNQGPLAIPC+ES+
Subjt:  MSAGLGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVQAEEEYGFTNQGPLAIPCEESI

A0A6J1IP24 auxin-induced protein 6B4.0e-4596.81Show/hide
Query:  MSAGLGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVQAEEEYGFTNQGPLAIPCEESI
        MSAGLGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSCRRFVVRA YLNHPVFKKLLVQAEEEYGFTNQGPLAIPC+ES+
Subjt:  MSAGLGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVQAEEEYGFTNQGPLAIPCEESI

SwissProt top hitse value%identityAlignment
O64538 Auxin-responsive protein SAUR405.3e-1047.83Show/hide
Query:  IPSDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVQAEEEYGFTNQGPLAIPCEESIGVSQLGSVR
        + S VP+GHV V VG    RFVV A  LNHPVF  LL ++ +EYG+T +G L IPC   +    + S+R
Subjt:  IPSDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVQAEEEYGFTNQGPLAIPCEESIGVSQLGSVR

O65695 Auxin-responsive protein SAUR506.2e-1138.71Show/hide
Query:  KCSKIRHIVRLRQMLRRW-----RNKARMSANRIPSDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVQAEEEYGFTNQGPLAIPCEESI
        K SK+     L+Q+L+R      +N      + +P DVP GH  V VG +  R++V  ++L HP F+ LL +AEEE+GF +   L IPC+E +
Subjt:  KCSKIRHIVRLRQMLRRW-----RNKARMSANRIPSDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVQAEEEYGFTNQGPLAIPCEESI

P33079 Auxin-induced protein 10A52.6e-0953.57Show/hide
Query:  DVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVQAEEEYGFTN-QGPLAIPCEE
        DVP G+ AV VG   RRF +  +YLN P F++LL QAEEE+G+ +  G L IPC+E
Subjt:  DVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVQAEEEYGFTN-QGPLAIPCEE

P33083 Auxin-induced protein 6B5.3e-1050Show/hide
Query:  KARMSANRIPS---DVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVQAEEEYGFTN-QGPLAIPCEESI
        KA  SAN+  S   DV  G++AV VG   RRFV+  +YLN P F+ LL QAEEE+G+ +  G L IPC E +
Subjt:  KARMSANRIPS---DVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVQAEEEYGFTN-QGPLAIPCEESI

Q9SGU2 Auxin-responsive protein SAUR718.1e-1145.24Show/hide
Query:  MLRRWRNKARMSANRIPSDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVQAEEEYGFTNQGPLAIPCEESIGVSQLGSVR
        +LR    + R    +  S VP GHV V VG    RFVV A  LNHPVF  LL Q+ +EYG+  QG L IPC   +    L S+R
Subjt:  MLRRWRNKARMSANRIPSDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVQAEEEYGFTNQGPLAIPCEESIGVSQLGSVR

Arabidopsis top hitse value%identityAlignment
AT1G19840.1 SAUR-like auxin-responsive protein family4.7e-3876.04Show/hide
Query:  MSAGLGKCSKIRHIVRLRQMLRRWRNKARMS--ANRIPSDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVQAEEEYGFTNQGPLAIPCEESI
        M+  L KCSKIRHIVRLRQMLRRWRNKAR+S  +  +PSDVP+GHVAVCVG+ CRRFVVRA+YLNHP+   LLVQAEEE+GF NQGPL IPCEES+
Subjt:  MSAGLGKCSKIRHIVRLRQMLRRWRNKARMS--ANRIPSDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVQAEEEYGFTNQGPLAIPCEESI

AT1G75590.1 SAUR-like auxin-responsive protein family2.5e-3969.49Show/hide
Query:  MSAGLGKCSKIRHIVRLRQMLRRWRNKARMSAN---RIPSDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVQAEEEYGFTNQGPLAIPCEESIGVS
        M+ GLGKCSKIRHIVRLRQMLRRWR++ARMS++    +PSDVP+GHVAV VG+SCRRFVVRATYLNHPV + LLVQAEEE+GF NQGPL IPCEES+   
Subjt:  MSAGLGKCSKIRHIVRLRQMLRRWRNKARMSAN---RIPSDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVQAEEEYGFTNQGPLAIPCEESIGVS

Query:  QLGSVREIGRFSKLLSYR
           S+R I R     S R
Subjt:  QLGSVREIGRFSKLLSYR

AT4G34750.1 SAUR-like auxin-responsive protein family1.4e-2661.96Show/hide
Query:  LGKCSKIRHIVRLRQMLRRWRNKARM-SANRIP-SDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVQAEEEYGFTNQGPLAIPCEESI
        +GK +KI  +VR+RQML++W+ KA + S+N  P SDVP GHVAV VG + RR+VVRA +LNHP+F++LL +AEEEYGF N GPLAIPC+ES+
Subjt:  LGKCSKIRHIVRLRQMLRRWRNKARM-SANRIP-SDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVQAEEEYGFTNQGPLAIPCEESI

AT4G34750.2 SAUR-like auxin-responsive protein family1.4e-2661.96Show/hide
Query:  LGKCSKIRHIVRLRQMLRRWRNKARM-SANRIP-SDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVQAEEEYGFTNQGPLAIPCEESI
        +GK +KI  +VR+RQML++W+ KA + S+N  P SDVP GHVAV VG + RR+VVRA +LNHP+F++LL +AEEEYGF N GPLAIPC+ES+
Subjt:  LGKCSKIRHIVRLRQMLRRWRNKARM-SANRIP-SDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVQAEEEYGFTNQGPLAIPCEESI

AT5G10990.1 SAUR-like auxin-responsive protein family2.1e-3867.57Show/hide
Query:  MSAGLGKCSKIRHIVRLRQMLRRWRNKARMSANR--IPSDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVQAEEEYGFTNQGPLAIPCEESIGVSQ
        M+ G+GKCSKIRHIV+LRQMLR+WRNKARMS+ R  +PSDVP+GHVAV VG SCRRFVV ATYLNHP+   LLV+AEEE+GF NQGPL IPCEES+    
Subjt:  MSAGLGKCSKIRHIVRLRQMLRRWRNKARMSANR--IPSDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVQAEEEYGFTNQGPLAIPCEESIGVSQ

Query:  LGSVREIGRFS
        +  +    RF+
Subjt:  LGSVREIGRFS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGGCCGGACTCGGAAAATGCAGCAAAATCCGGCACATTGTCAGGCTCCGACAAATGCTCCGACGGTGGCGCAACAAGGCTAGAATGTCCGCTAATCGCATACCTTC
CGACGTACCCGCCGGACATGTGGCTGTCTGTGTCGGAACCAGCTGCCGGCGCTTCGTCGTCCGGGCCACTTACTTGAACCACCCGGTTTTCAAGAAGCTTCTGGTTCAAG
CCGAAGAGGAGTACGGGTTCACCAATCAAGGCCCTTTGGCAATTCCTTGCGAAGAGTCGATCGGAGTCTCCCAACTCGGGTCGGTTCGTGAAATTGGACGATTTTCAAAG
TTATTGTCATATCGGAATCAGAACCGGGCTCGATTTATGGCCGGAATCCCGGCCTTTGCTTCATGGGTTGGCCGAGAAATCCATTTGCAACTTTGCAGAAAAGTGAAGAA
ACAAGAACAACATCAACAGAAGCGGAGTCAAAGATCCAGATTTGACTCGGTTGAGTTACCCGAGATGGGTTTTTTAGCTCCGGAGAATGCTTATGGAGATGGCAAAACTG
GTGGAGGGATCATTTCACCGTGTCGTCCCGAGCCCGAATCGGAGTCGGGGCGAAACCGAGAAGGAAGAAGAACAACAACGACAACAGAGAAAGTGTTGCTAATTTGGCCA
GAGGGGAGGCTCCAATAG
mRNA sequenceShow/hide mRNA sequence
ATGTCGGCCGGACTCGGAAAATGCAGCAAAATCCGGCACATTGTCAGGCTCCGACAAATGCTCCGACGGTGGCGCAACAAGGCTAGAATGTCCGCTAATCGCATACCTTC
CGACGTACCCGCCGGACATGTGGCTGTCTGTGTCGGAACCAGCTGCCGGCGCTTCGTCGTCCGGGCCACTTACTTGAACCACCCGGTTTTCAAGAAGCTTCTGGTTCAAG
CCGAAGAGGAGTACGGGTTCACCAATCAAGGCCCTTTGGCAATTCCTTGCGAAGAGTCGATCGGAGTCTCCCAACTCGGGTCGGTTCGTGAAATTGGACGATTTTCAAAG
TTATTGTCATATCGGAATCAGAACCGGGCTCGATTTATGGCCGGAATCCCGGCCTTTGCTTCATGGGTTGGCCGAGAAATCCATTTGCAACTTTGCAGAAAAGTGAAGAA
ACAAGAACAACATCAACAGAAGCGGAGTCAAAGATCCAGATTTGACTCGGTTGAGTTACCCGAGATGGGTTTTTTAGCTCCGGAGAATGCTTATGGAGATGGCAAAACTG
GTGGAGGGATCATTTCACCGTGTCGTCCCGAGCCCGAATCGGAGTCGGGGCGAAACCGAGAAGGAAGAAGAACAACAACGACAACAGAGAAAGTGTTGCTAATTTGGCCA
GAGGGGAGGCTCCAATAG
Protein sequenceShow/hide protein sequence
MSAGLGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVQAEEEYGFTNQGPLAIPCEESIGVSQLGSVREIGRFSK
LLSYRNQNRARFMAGIPAFASWVGREIHLQLCRKVKKQEQHQQKRSQRSRFDSVELPEMGFLAPENAYGDGKTGGGIISPCRPEPESESGRNREGRRTTTTTEKVLLIWP
EGRLQ