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ClCG05G018867 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG05G018867
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Descriptionjacalin-related lectin 3-like
Genome locationCG_Chr05:31137657..31137926
RNA-Seq ExpressionClCG05G018867
SyntenyClCG05G018867
Gene Ontology termsGO:0009611 - response to wounding (biological process)
GO:0031347 - regulation of defense response (biological process)
GO:0035556 - intracellular signal transduction (biological process)
GO:2000022 - regulation of jasmonic acid mediated signaling pathway (biological process)
GO:0005634 - nucleus (cellular component)
GO:0030246 - carbohydrate binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001229 - Jacalin-like lectin domain
IPR036404 - Jacalin-like lectin domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6591308.1 hypothetical protein SDJN03_13654, partial [Cucurbita argyrosperma subsp. sororia]3.0e-2493.55Show/hide
Query:  GFDGTVIRSLTLETNKRSYGPFGVENGTKFSFPTVGVKIVGIHGRSGLYLDAIGLLALSIQD
        G D TVIRSLTLETNKR+YGPFGVENGTKFSFPTVGVKIVG+HGRSGLYLDAIGLLALSIQD
Subjt:  GFDGTVIRSLTLETNKRSYGPFGVENGTKFSFPTVGVKIVGIHGRSGLYLDAIGLLALSIQD

XP_022936285.1 jacalin-related lectin 4-like [Cucurbita moschata]3.0e-2493.55Show/hide
Query:  GFDGTVIRSLTLETNKRSYGPFGVENGTKFSFPTVGVKIVGIHGRSGLYLDAIGLLALSIQD
        G D TVIRSLTLETNKR+YGPFGVENGTKFSFPTVGVKIVG+HGRSGLYLDAIGLLALSIQD
Subjt:  GFDGTVIRSLTLETNKRSYGPFGVENGTKFSFPTVGVKIVGIHGRSGLYLDAIGLLALSIQD

XP_022975798.1 jacalin-related lectin 3-like [Cucurbita maxima]3.0e-2493.55Show/hide
Query:  GFDGTVIRSLTLETNKRSYGPFGVENGTKFSFPTVGVKIVGIHGRSGLYLDAIGLLALSIQD
        G D TVIRSLTLETNKR+YGPFGVENGTKFSFPTVGVKIVG+HGRSGLYLDAIGLLALSIQD
Subjt:  GFDGTVIRSLTLETNKRSYGPFGVENGTKFSFPTVGVKIVGIHGRSGLYLDAIGLLALSIQD

XP_023536123.1 jacalin-related lectin 4-like [Cucurbita pepo subsp. pepo]3.0e-2493.55Show/hide
Query:  GFDGTVIRSLTLETNKRSYGPFGVENGTKFSFPTVGVKIVGIHGRSGLYLDAIGLLALSIQD
        G D TVIRSLTLETNKR+YGPFGVENGTKFSFPTVGVKIVG+HGRSGLYLDAIGLLALSIQD
Subjt:  GFDGTVIRSLTLETNKRSYGPFGVENGTKFSFPTVGVKIVGIHGRSGLYLDAIGLLALSIQD

XP_038898646.1 mannose/glucose-specific lectin-like [Benincasa hispida]6.0e-2595.16Show/hide
Query:  GFDGTVIRSLTLETNKRSYGPFGVENGTKFSFPTVGVKIVGIHGRSGLYLDAIGLLALSIQD
        GFDGTVIRSLT+ETNKRSYGPFGVENGTKFSFPTVGVKIVGIHGRSG+YLDAIGLLALSIQ+
Subjt:  GFDGTVIRSLTLETNKRSYGPFGVENGTKFSFPTVGVKIVGIHGRSGLYLDAIGLLALSIQD

TrEMBL top hitse value%identityAlignment
A0A1S3CRN3 agglutinin-like1.1e-2183.87Show/hide
Query:  GFDGTVIRSLTLETNKRSYGPFGVENGTKFSFPTVGVKIVGIHGRSGLYLDAIGLLALSIQD
        GFDGTVIRSLT+ TN R+YGPFGVENGTKFSFP  GVK+VGIHGRSGLYLDAIG LAL +QD
Subjt:  GFDGTVIRSLTLETNKRSYGPFGVENGTKFSFPTVGVKIVGIHGRSGLYLDAIGLLALSIQD

A0A5A7TIW6 Agglutinin-like6.1e-2387.1Show/hide
Query:  GFDGTVIRSLTLETNKRSYGPFGVENGTKFSFPTVGVKIVGIHGRSGLYLDAIGLLALSIQD
        GFDGTVIRSLT+ETN R+YGPFGVENGTKFSFP  GVK+VGIHGRSGLYLDAIGLLAL +QD
Subjt:  GFDGTVIRSLTLETNKRSYGPFGVENGTKFSFPTVGVKIVGIHGRSGLYLDAIGLLALSIQD

A0A6J1C6X3 jacalin-related lectin 3-like1.1e-1977.42Show/hide
Query:  GFDGTVIRSLTLETNKRSYGPFGVENGTKFSFPTVGVKIVGIHGRSGLYLDAIGLLALSIQD
        G++ TVIRSLT+ETNKR+YGPFGVE+GTKFSFP+VG+K+VGIHGRSG+YLDAIGL A+ I+D
Subjt:  GFDGTVIRSLTLETNKRSYGPFGVENGTKFSFPTVGVKIVGIHGRSGLYLDAIGLLALSIQD

A0A6J1FD77 jacalin-related lectin 4-like1.4e-2493.55Show/hide
Query:  GFDGTVIRSLTLETNKRSYGPFGVENGTKFSFPTVGVKIVGIHGRSGLYLDAIGLLALSIQD
        G D TVIRSLTLETNKR+YGPFGVENGTKFSFPTVGVKIVG+HGRSGLYLDAIGLLALSIQD
Subjt:  GFDGTVIRSLTLETNKRSYGPFGVENGTKFSFPTVGVKIVGIHGRSGLYLDAIGLLALSIQD

A0A6J1IKB1 jacalin-related lectin 3-like1.4e-2493.55Show/hide
Query:  GFDGTVIRSLTLETNKRSYGPFGVENGTKFSFPTVGVKIVGIHGRSGLYLDAIGLLALSIQD
        G D TVIRSLTLETNKR+YGPFGVENGTKFSFPTVGVKIVG+HGRSGLYLDAIGLLALSIQD
Subjt:  GFDGTVIRSLTLETNKRSYGPFGVENGTKFSFPTVGVKIVGIHGRSGLYLDAIGLLALSIQD

SwissProt top hitse value%identityAlignment
C0HLR9 Mannose/glucose-specific lectin2.4e-0852.94Show/hide
Query:  TVIRSLTLETNKRSYGPFGVENGTKFSFPTVGVKIVGIHGRSGLYLDAIGL
        T I SL+  TN  +YGPFG  +GT FS P     ++G HGR+G YLDAIG+
Subjt:  TVIRSLTLETNKRSYGPFGVENGTKFSFPTVGVKIVGIHGRSGLYLDAIGL

F4HQX1 Jacalin-related lectin 31.6e-1260.38Show/hide
Query:  GTV-IRSLTLETNKRSYGPFGVENGTKFSFPTVGVKIVGIHGRSGLYLDAIGL
        GT+ +RSLT E+N+R YGPFGV++GT F+ P  G KI+G HG++G YLDAIG+
Subjt:  GTV-IRSLTLETNKRSYGPFGVENGTKFSFPTVGVKIVGIHGRSGLYLDAIGL

P18674 Agglutinin alpha chain6.3e-0956.6Show/hide
Query:  MEGFDGTVIRSLTLETNKRSYGPFGVENGTKFSFPTVGVKIVGIHGRSGLYLD
        +EG+  TVIRSLT +TNK++YGP+GV NGT FS P     IVG  G  G +LD
Subjt:  MEGFDGTVIRSLTLETNKRSYGPFGVENGTKFSFPTVGVKIVGIHGRSGLYLD

P83304 Mannose/glucose-specific lectin (Fragment)6.3e-0948.21Show/hide
Query:  EGFDGTVIRSLTLETNKRSYGPFGVENGTKFSFPTVGVKIVGIHGRSGLYLDAIGL
        +GF+  V+ SL+  TN   +GPFG+ +GT FS P  G  + G HG+SG YLD+IG+
Subjt:  EGFDGTVIRSLTLETNKRSYGPFGVENGTKFSFPTVGVKIVGIHGRSGLYLDAIGL

Q9SSM3 Jacalin-related lectin 195.1e-1161.22Show/hide
Query:  VIRSLTLETNKRSYGPFGVENGTKFSFPTVGVKIVGIHGRSGLYLDAIG
        VIRS+T ++NK+ YGP+GVE GT F+F   G +IVG++GRSG YLD+IG
Subjt:  VIRSLTLETNKRSYGPFGVENGTKFSFPTVGVKIVGIHGRSGLYLDAIG

Arabidopsis top hitse value%identityAlignment
AT1G19715.1 Mannose-binding lectin superfamily protein1.1e-1360.38Show/hide
Query:  GTV-IRSLTLETNKRSYGPFGVENGTKFSFPTVGVKIVGIHGRSGLYLDAIGL
        GT+ +RSLT E+N+R YGPFGV++GT F+ P  G KI+G HG++G YLDAIG+
Subjt:  GTV-IRSLTLETNKRSYGPFGVENGTKFSFPTVGVKIVGIHGRSGLYLDAIGL

AT1G19715.2 Mannose-binding lectin superfamily protein1.1e-1360.38Show/hide
Query:  GTV-IRSLTLETNKRSYGPFGVENGTKFSFPTVGVKIVGIHGRSGLYLDAIGL
        GT+ +RSLT E+N+R YGPFGV++GT F+ P  G KI+G HG++G YLDAIG+
Subjt:  GTV-IRSLTLETNKRSYGPFGVENGTKFSFPTVGVKIVGIHGRSGLYLDAIGL

AT1G19715.3 Mannose-binding lectin superfamily protein1.1e-1360.38Show/hide
Query:  GTV-IRSLTLETNKRSYGPFGVENGTKFSFPTVGVKIVGIHGRSGLYLDAIGL
        GT+ +RSLT E+N+R YGPFGV++GT F+ P  G KI+G HG++G YLDAIG+
Subjt:  GTV-IRSLTLETNKRSYGPFGVENGTKFSFPTVGVKIVGIHGRSGLYLDAIGL

AT1G73040.1 Mannose-binding lectin superfamily protein3.7e-1261.22Show/hide
Query:  VIRSLTLETNKRSYGPFGVENGTKFSFPTVGVKIVGIHGRSGLYLDAIG
        VIRS+T ++NK+ YGP+GVE GT F+F   G +IVG++GRSG YLD+IG
Subjt:  VIRSLTLETNKRSYGPFGVENGTKFSFPTVGVKIVGIHGRSGLYLDAIG

AT3G16460.1 Mannose-binding lectin superfamily protein6.5e-0950.98Show/hide
Query:  TVIRSLTLETNK-RSYGPFGVENGTKFSFPTVGVKIVGIHGRSGLYLDAIG
        TV+ +L  +T+K ++ GPFG+ +GTKF F   G KI G HGR+G Y++AIG
Subjt:  TVIRSLTLETNK-RSYGPFGVENGTKFSFPTVGVKIVGIHGRSGLYLDAIG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGGATTTGATGGCACTGTGATTCGATCGTTGACTCTGGAAACAAACAAAAGAAGTTATGGGCCGTTTGGGGTTGAAAATGGAACCAAGTTTTCATTCCCAACTGT
TGGGGTGAAGATCGTTGGCATCCATGGCAGATCTGGTCTCTATCTCGATGCCATTGGACTTCTTGCACTTTCAATTCAAGACTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAAGGATTTGATGGCACTGTGATTCGATCGTTGACTCTGGAAACAAACAAAAGAAGTTATGGGCCGTTTGGGGTTGAAAATGGAACCAAGTTTTCATTCCCAACTGT
TGGGGTGAAGATCGTTGGCATCCATGGCAGATCTGGTCTCTATCTCGATGCCATTGGACTTCTTGCACTTTCAATTCAAGACTAG
Protein sequenceShow/hide protein sequence
MEGFDGTVIRSLTLETNKRSYGPFGVENGTKFSFPTVGVKIVGIHGRSGLYLDAIGLLALSIQD