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ClCG05G019380 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG05G019380
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionLINE-1 retrotransposable element ORF2 protein
Genome locationCG_Chr05:31661600..31662913
RNA-Seq ExpressionClCG05G019380
SyntenyClCG05G019380
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAB4278922.1 unnamed protein product [Prunus armeniaca]3.7e-1152.63Show/hide
Query:  SEVCKEIEKLMRNFLWEGTDAARGSHLIKWDLITHPKDTGGLGINRIRVANDALLGK
        + V K +EK+MRNFLWEG +  R  HL+ W++++ PK+ GGLGI  +R  N+ALLGK
Subjt:  SEVCKEIEKLMRNFLWEGTDAARGSHLIKWDLITHPKDTGGLGINRIRVANDALLGK
KAA0034017.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]1.4e-1050.82Show/hide
Query:  FPPISEVCKEIEKLMRNFLWEGTDAARGSHLIKWDLITHPKDTGGLGINRIRVANDALLGK
        F   S   K IEKL RNFLW+G+  ++GSH+I W ++T PK+  GLGI+R+++ N ALL K
Subjt:  FPPISEVCKEIEKLMRNFLWEGTDAARGSHLIKWDLITHPKDTGGLGINRIRVANDALLGK
KAA0045262.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]5.8e-1255.74Show/hide
Query:  FPPISEVCKEIEKLMRNFLWEGTDAARGSHLIKWDLITHPKDTGGLGINRIRVANDALLGK
        F   S  CK IEK  RNFLW+G++ ++GSHLI W  +T PK+ GGLGI+R++V N ALL K
Subjt:  FPPISEVCKEIEKLMRNFLWEGTDAARGSHLIKWDLITHPKDTGGLGINRIRVANDALLGK
TYK00493.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]1.3e-1155.74Show/hide
Query:  FPPISEVCKEIEKLMRNFLWEGTDAARGSHLIKWDLITHPKDTGGLGINRIRVANDALLGK
        F   S   K IEKL RNFLW+G+   +GSHLI W ++T PK+ GGLGI+R++V N ALL K
Subjt:  FPPISEVCKEIEKLMRNFLWEGTDAARGSHLIKWDLITHPKDTGGLGINRIRVANDALLGK
TYK05690.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]7.5e-1254.1Show/hide
Query:  FPPISEVCKEIEKLMRNFLWEGTDAARGSHLIKWDLITHPKDTGGLGINRIRVANDALLGK
        F   S   K IEKL RNFLW+G+  ++GSHLI W ++T PK+ GGLGI+R+++ N ALL K
Subjt:  FPPISEVCKEIEKLMRNFLWEGTDAARGSHLIKWDLITHPKDTGGLGINRIRVANDALLGK
TrEMBL top hitse value%identityAlignment
A0A5D3BL61 LINE-1 retrotransposable element ORF2 protein6.2e-1255.74Show/hide
Query:  FPPISEVCKEIEKLMRNFLWEGTDAARGSHLIKWDLITHPKDTGGLGINRIRVANDALLGK
        F   S   K IEKL RNFLW+G+   +GSHLI W ++T PK+ GGLGI+R++V N ALL K
Subjt:  FPPISEVCKEIEKLMRNFLWEGTDAARGSHLIKWDLITHPKDTGGLGINRIRVANDALLGK
A0A5D3BT10 LINE-1 retrotransposable element ORF2 protein6.9e-1150.82Show/hide
Query:  FPPISEVCKEIEKLMRNFLWEGTDAARGSHLIKWDLITHPKDTGGLGINRIRVANDALLGK
        F   S   K IEKL RNFLW+G+  ++GSH+I W ++T PK+  GLGI+R+++ N ALL K
Subjt:  FPPISEVCKEIEKLMRNFLWEGTDAARGSHLIKWDLITHPKDTGGLGINRIRVANDALLGK
A0A5D3C2W8 LINE-1 retrotransposable element ORF2 protein3.6e-1254.1Show/hide
Query:  FPPISEVCKEIEKLMRNFLWEGTDAARGSHLIKWDLITHPKDTGGLGINRIRVANDALLGK
        F   S   K IEKL RNFLW+G+  ++GSHLI W ++T PK+ GGLGI+R+++ N ALL K
Subjt:  FPPISEVCKEIEKLMRNFLWEGTDAARGSHLIKWDLITHPKDTGGLGINRIRVANDALLGK
A0A5D3DZ07 LINE-1 retrotransposable element ORF2 protein2.8e-1255.74Show/hide
Query:  FPPISEVCKEIEKLMRNFLWEGTDAARGSHLIKWDLITHPKDTGGLGINRIRVANDALLGK
        F   S  CK IEK  RNFLW+G++ ++GSHLI W  +T PK+ GGLGI+R++V N ALL K
Subjt:  FPPISEVCKEIEKLMRNFLWEGTDAARGSHLIKWDLITHPKDTGGLGINRIRVANDALLGK
A0A6J5XET8 Uncharacterized protein1.8e-1152.63Show/hide
Query:  SEVCKEIEKLMRNFLWEGTDAARGSHLIKWDLITHPKDTGGLGINRIRVANDALLGK
        + V K +EK+MRNFLWEG +  R  HL+ W++++ PK+ GGLGI  +R  N+ALLGK
Subjt:  SEVCKEIEKLMRNFLWEGTDAARGSHLIKWDLITHPKDTGGLGINRIRVANDALLGK
SwissProt top hitse value%identityAlignment
P0C2F6 Putative ribonuclease H protein At1g657501.7e-0636.36Show/hide
Query:  VCKEIEKLMRNFLWEGTDAARGSHLIKWDLITHPKDTGGLGINRIRVANDALLGK
        +   +++L R FLW  T   +  HL+KW  +  PK  GGLG+   +  N AL+ K
Subjt:  VCKEIEKLMRNFLWEGTDAARGSHLIKWDLITHPKDTGGLGINRIRVANDALLGK
Arabidopsis top hitse value%identityAlignment
AT3G24255.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein6.6e-0637.5Show/hide
Query:  AFPPISEVCKEIEKLMRNFLWEGTDAARGSHLIKWDLITHPKDTGGLGINRIRVAN
        AF   S   KEI+ +  +FLW G +       + W  +  PKD GGLGI  ++ AN
Subjt:  AFPPISEVCKEIEKLMRNFLWEGTDAARGSHLIKWDLITHPKDTGGLGINRIRVAN
AT4G29090.1 Ribonuclease H-like superfamily protein1.0e-0640Show/hide
Query:  VCKEIEKLMRNFLWEGTDAARGSHLIKWDLITHPKDTGGLGINRIRVANDALLGK
        VCK+I  ++ +F W     A+G H   WD ++  K  GG+G   I   N ALLGK
Subjt:  VCKEIEKLMRNFLWEGTDAARGSHLIKWDLITHPKDTGGLGINRIRVANDALLGK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCATTTCCTCCCATTTCAGAAGTCTGCAAAGAGATTGAGAAGTTGATGCGAAACTTCCTCTGGGAAGGTACTGACGCTGCTAGAGGTTCCCACCTAATCAAATGGGA
TCTTATAACGCATCCTAAAGACACAGGTGGTCTCGGGATCAACAGAATTAGAGTTGCTAACGATGCCCTTCTTGGAAAATAG
mRNA sequenceShow/hide mRNA sequence
ATGGCATTTCCTCCCATTTCAGAAGTCTGCAAAGAGATTGAGAAGTTGATGCGAAACTTCCTCTGGGAAGGTACTGACGCTGCTAGAGGTTCCCACCTAATCAAATGGGA
TCTTATAACGCATCCTAAAGACACAGGTGGTCTCGGGATCAACAGAATTAGAGTTGCTAACGATGCCCTTCTTGGAAAATAG
Protein sequenceShow/hide protein sequence
MAFPPISEVCKEIEKLMRNFLWEGTDAARGSHLIKWDLITHPKDTGGLGINRIRVANDALLGK