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ClCG05G019640 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG05G019640
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionF-box protein
Genome locationCG_Chr05:31917089..31917412
RNA-Seq ExpressionClCG05G019640
SyntenyClCG05G019640
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039746.1 F-box protein [Cucumis melo var. makuwa]1.1e-2354.37Show/hide
Query:  DAIFNPMTNEFVQVPRHELDGDIHYFGFGLTTTRRNYKLFRVSLSDSESSSMMDVLTFSKSGTNPNHDQWRHLQFMNI-----GAYLNGVIYWIGKEKYK
        D IFNPMTNEF+QVPRHELDGD +++G G + T + YK+FRV  + + +SS+M +LTF +S TN  ++QWR L  + I     G YLNG IYW+G+++YK
Subjt:  DAIFNPMTNEFVQVPRHELDGDIHYFGFGLTTTRRNYKLFRVSLSDSESSSMMDVLTFSKSGTNPNHDQWRHLQFMNI-----GAYLNGVIYWIGKEKYK

Query:  ENE
        ENE
Subjt:  ENE

KAA0039747.1 F-box protein [Cucumis melo var. makuwa]1.2e-2254.87Show/hide
Query:  FVNVDAIFNPMTNEFVQVPRHELDGDIHYFGFGLTTTRRNYKLFRVSLS------DSESSSMMDVLTFS-KSGTNPNHDQWRHLQFMNI----GAYLNGV
        F   D IFNPMTNEF Q+PR ELDGDI+ +  G + T + YKLFRV+ S         +SS+MDVLTF+ +S TN NH QWR L  + +    GAYLNGV
Subjt:  FVNVDAIFNPMTNEFVQVPRHELDGDIHYFGFGLTTTRRNYKLFRVSLS------DSESSSMMDVLTFS-KSGTNPNHDQWRHLQFMNI----GAYLNGV

Query:  IYWIGKEKYKENE
        IYWIG ++ KENE
Subjt:  IYWIGKEKYKENE

TYK24751.1 F-box protein [Cucumis melo var. makuwa]8.5e-2453.27Show/hide
Query:  FVNVDAIFNPMTNEFVQVPRHELDGDIHYFGFGLTTTRRNYKLFRVSLSDSESSSMMDVLTFSKSGTNPNHDQWRHLQFMNI-----GAYLNGVIYWIGK
        F   D IFNPMTNEF+QVPRHELDGD +++G G + T + YK+FRV  + + +SS+M +LTF +S TN  ++QWR L  + I     G YLNG IYW+G+
Subjt:  FVNVDAIFNPMTNEFVQVPRHELDGDIHYFGFGLTTTRRNYKLFRVSLSDSESSSMMDVLTFSKSGTNPNHDQWRHLQFMNI-----GAYLNGVIYWIGK

Query:  EKYKENE
        ++YKENE
Subjt:  EKYKENE

XP_008460183.1 PREDICTED: uncharacterized protein LOC103499068 [Cucumis melo]1.2e-2254.87Show/hide
Query:  FVNVDAIFNPMTNEFVQVPRHELDGDIHYFGFGLTTTRRNYKLFRVSLS------DSESSSMMDVLTFS-KSGTNPNHDQWRHLQFMNI----GAYLNGV
        F   D IFNPMTNEF Q+PR ELDGDI+ +  G + T + YKLFRV+ S         +SS+MDVLTF+ +S TN NH QWR L  + +    GAYLNGV
Subjt:  FVNVDAIFNPMTNEFVQVPRHELDGDIHYFGFGLTTTRRNYKLFRVSLS------DSESSSMMDVLTFS-KSGTNPNHDQWRHLQFMNI----GAYLNGV

Query:  IYWIGKEKYKENE
        IYWIG ++ KENE
Subjt:  IYWIGKEKYKENE

XP_038890298.1 F-box protein At3g07870-like [Benincasa hispida]1.2e-3063.39Show/hide
Query:  FVNVDAIFNPMTNEFVQVPRHELDGDIHYFGFGLTTTRRNYKLFRVSLSDS-----ESSSMMDVLTFSKSGTNPNHDQWRHLQFMNI-----GAYLNGVI
        +   D IFNPMTNEF+QVPR +LD DI+YFGFG TTT + YKLFRV  S S     ES S+MDVLTFS+SGTN NH+QWR+L ++ +     GAYLNG I
Subjt:  FVNVDAIFNPMTNEFVQVPRHELDGDIHYFGFGLTTTRRNYKLFRVSLSDS-----ESSSMMDVLTFSKSGTNPNHDQWRHLQFMNI-----GAYLNGVI

Query:  YWIGKEKYKENE
        YWIGKE+ KENE
Subjt:  YWIGKEKYKENE

TrEMBL top hitse value%identityAlignment
A0A0A0LPC6 Uncharacterized protein9.9e-1844.83Show/hide
Query:  IFNPMTNEFVQVPRHELDGDIHYFGFGLTTTRRNYKLFRVS--------------LSDSESSSMMDVLTFSKSGTN--PNHDQWRHLQFMNI----GAYL
        IFNPMTNEF QV   +   D +++GFGL+   + YKLFRVS                  ++   M+VLTF +SGTN  P H+QWRHL  ++     G YL
Subjt:  IFNPMTNEFVQVPRHELDGDIHYFGFGLTTTRRNYKLFRVS--------------LSDSESSSMMDVLTFSKSGTN--PNHDQWRHLQFMNI----GAYL

Query:  NGVIYWIGKEKYKENE
        NG+IYW+GKEK K+ +
Subjt:  NGVIYWIGKEKYKENE

A0A1S3CCE7 uncharacterized protein LOC1034990686.0e-2354.87Show/hide
Query:  FVNVDAIFNPMTNEFVQVPRHELDGDIHYFGFGLTTTRRNYKLFRVSLS------DSESSSMMDVLTFS-KSGTNPNHDQWRHLQFMNI----GAYLNGV
        F   D IFNPMTNEF Q+PR ELDGDI+ +  G + T + YKLFRV+ S         +SS+MDVLTF+ +S TN NH QWR L  + +    GAYLNGV
Subjt:  FVNVDAIFNPMTNEFVQVPRHELDGDIHYFGFGLTTTRRNYKLFRVSLS------DSESSSMMDVLTFS-KSGTNPNHDQWRHLQFMNI----GAYLNGV

Query:  IYWIGKEKYKENE
        IYWIG ++ KENE
Subjt:  IYWIGKEKYKENE

A0A5A7TCF3 F-box protein5.4e-2454.37Show/hide
Query:  DAIFNPMTNEFVQVPRHELDGDIHYFGFGLTTTRRNYKLFRVSLSDSESSSMMDVLTFSKSGTNPNHDQWRHLQFMNI-----GAYLNGVIYWIGKEKYK
        D IFNPMTNEF+QVPRHELDGD +++G G + T + YK+FRV  + + +SS+M +LTF +S TN  ++QWR L  + I     G YLNG IYW+G+++YK
Subjt:  DAIFNPMTNEFVQVPRHELDGDIHYFGFGLTTTRRNYKLFRVSLSDSESSSMMDVLTFSKSGTNPNHDQWRHLQFMNI-----GAYLNGVIYWIGKEKYK

Query:  ENE
        ENE
Subjt:  ENE

A0A5A7TE00 F-box protein6.0e-2354.87Show/hide
Query:  FVNVDAIFNPMTNEFVQVPRHELDGDIHYFGFGLTTTRRNYKLFRVSLS------DSESSSMMDVLTFS-KSGTNPNHDQWRHLQFMNI----GAYLNGV
        F   D IFNPMTNEF Q+PR ELDGDI+ +  G + T + YKLFRV+ S         +SS+MDVLTF+ +S TN NH QWR L  + +    GAYLNGV
Subjt:  FVNVDAIFNPMTNEFVQVPRHELDGDIHYFGFGLTTTRRNYKLFRVSLS------DSESSSMMDVLTFS-KSGTNPNHDQWRHLQFMNI----GAYLNGV

Query:  IYWIGKEKYKENE
        IYWIG ++ KENE
Subjt:  IYWIGKEKYKENE

A0A5D3DMB7 F-box protein4.1e-2453.27Show/hide
Query:  FVNVDAIFNPMTNEFVQVPRHELDGDIHYFGFGLTTTRRNYKLFRVSLSDSESSSMMDVLTFSKSGTNPNHDQWRHLQFMNI-----GAYLNGVIYWIGK
        F   D IFNPMTNEF+QVPRHELDGD +++G G + T + YK+FRV  + + +SS+M +LTF +S TN  ++QWR L  + I     G YLNG IYW+G+
Subjt:  FVNVDAIFNPMTNEFVQVPRHELDGDIHYFGFGLTTTRRNYKLFRVSLSDSESSSMMDVLTFSKSGTNPNHDQWRHLQFMNI-----GAYLNGVIYWIGK

Query:  EKYKENE
        ++YKENE
Subjt:  EKYKENE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCTCCTTGTTATTTGTAAATGTTGATGCCATATTCAATCCTATGACTAATGAGTTCGTCCAAGTTCCTCGACATGAGTTAGATGGTGATATTCACTACTTTGGATT
TGGTTTAACCACTACAAGGAGGAATTACAAATTGTTTAGAGTTAGTCTCTCTGATTCTGAATCTAGCTCCATGATGGATGTTTTGACGTTTAGTAAGAGTGGAACCAATC
CTAACCATGATCAGTGGAGGCATCTTCAATTCATGAATATCGGTGCTTACTTGAATGGAGTTATCTATTGGATAGGAAAAGAGAAATATAAAGAAAATGAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTCTCCTTGTTATTTGTAAATGTTGATGCCATATTCAATCCTATGACTAATGAGTTCGTCCAAGTTCCTCGACATGAGTTAGATGGTGATATTCACTACTTTGGATT
TGGTTTAACCACTACAAGGAGGAATTACAAATTGTTTAGAGTTAGTCTCTCTGATTCTGAATCTAGCTCCATGATGGATGTTTTGACGTTTAGTAAGAGTGGAACCAATC
CTAACCATGATCAGTGGAGGCATCTTCAATTCATGAATATCGGTGCTTACTTGAATGGAGTTATCTATTGGATAGGAAAAGAGAAATATAAAGAAAATGAGTAG
Protein sequenceShow/hide protein sequence
MVSLLFVNVDAIFNPMTNEFVQVPRHELDGDIHYFGFGLTTTRRNYKLFRVSLSDSESSSMMDVLTFSKSGTNPNHDQWRHLQFMNIGAYLNGVIYWIGKEKYKENE