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ClCG05G019800 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG05G019800
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Descriptioncalmodulin-like
Genome locationCG_Chr05:32037049..32037321
RNA-Seq ExpressionClCG05G019800
SyntenyClCG05G019800
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064376.1 putative calcium-binding protein CML27 [Cucumis melo var. makuwa]2.1e-3990Show/hide
Query:  MARKSKTYHPRAKLSREQLLVIFRNHDSDKDGRLSTTELTEAFRYIGAFLPSYRARHALFHSDSDRDGFIGEKDFELLLNYAEQRQYTII
        M+R+SKTYHPRA+LSREQLL+IFRNHDSDKDGRLSTTELTEAFRYIGAFLP YRARHALFH+DSDRDGFI EKDFELL+NYAEQRQYT+I
Subjt:  MARKSKTYHPRAKLSREQLLVIFRNHDSDKDGRLSTTELTEAFRYIGAFLPSYRARHALFHSDSDRDGFIGEKDFELLLNYAEQRQYTII

KAG6591370.1 Polcalcin Bet v 4, partial [Cucurbita argyrosperma subsp. sororia]5.9e-3485.23Show/hide
Query:  MARKSKTYHPRAKLSREQLLVIFRNHDSDKDGRLSTTELTEAFRYIGAFLPSYRARHALFHSDSDRDGFIGEKDFELLLNYAEQRQYT
        MARKSKTY PR KLSREQL VIFRNHD D DGRLSTTELT AFRYIGAFLPSYRA HAL H+DSD DGFIGEKDFELL+NYAE+R+YT
Subjt:  MARKSKTYHPRAKLSREQLLVIFRNHDSDKDGRLSTTELTEAFRYIGAFLPSYRARHALFHSDSDRDGFIGEKDFELLLNYAEQRQYT

KAG6608481.1 Polcalcin Bet v 4, partial [Cucurbita argyrosperma subsp. sororia]2.1e-3178.89Show/hide
Query:  MARKSKTYHPRAKLSREQLLVIFRNHDSDKDGRLSTTELTEAFRYIGAFLPSYRARHALFHSDSDRDGFIGEKDFELLLNYAEQRQYTII
        MARK+K   PR KLSREQL VIFRNHD D DGRLS TELTEAFRYIGAFLPSYRA HAL ++DSDRDGFIGEKDFE L+NY E+R YTI+
Subjt:  MARKSKTYHPRAKLSREQLLVIFRNHDSDKDGRLSTTELTEAFRYIGAFLPSYRARHALFHSDSDRDGFIGEKDFELLLNYAEQRQYTII

KAG7024248.1 Polcalcin Bet v 4, partial [Cucurbita argyrosperma subsp. argyrosperma]1.2e-3484.44Show/hide
Query:  MARKSKTYHPRAKLSREQLLVIFRNHDSDKDGRLSTTELTEAFRYIGAFLPSYRARHALFHSDSDRDGFIGEKDFELLLNYAEQRQYTII
        MARKSKTY PR KLSREQL VIFRNHD D DGRLSTTELT AFRYIGAFLPSYRA HAL H+DSD DGFIGEKDFELL+NYAE+R+YT+I
Subjt:  MARKSKTYHPRAKLSREQLLVIFRNHDSDKDGRLSTTELTEAFRYIGAFLPSYRARHALFHSDSDRDGFIGEKDFELLLNYAEQRQYTII

KGN55185.1 hypothetical protein Csa_012915 [Cucumis sativus]1.8e-3890Show/hide
Query:  MARKSKTYHPRAKLSREQLLVIFRNHDSDKDGRLSTTELTEAFRYIGAFLPSYRARHALFHSDSDRDGFIGEKDFELLLNYAEQRQYTII
        M+RKSK Y+PRAKLSREQLL+IFRNHDSDKDGRLSTTELTEAFRYIGAFLP+YRARHAL H+DSDRDGFIGEKDFE L+NYAEQRQYTII
Subjt:  MARKSKTYHPRAKLSREQLLVIFRNHDSDKDGRLSTTELTEAFRYIGAFLPSYRARHALFHSDSDRDGFIGEKDFELLLNYAEQRQYTII

TrEMBL top hitse value%identityAlignment
A0A0A0KZR6 Uncharacterized protein8.5e-3990Show/hide
Query:  MARKSKTYHPRAKLSREQLLVIFRNHDSDKDGRLSTTELTEAFRYIGAFLPSYRARHALFHSDSDRDGFIGEKDFELLLNYAEQRQYTII
        M+RKSK Y+PRAKLSREQLL+IFRNHDSDKDGRLSTTELTEAFRYIGAFLP+YRARHAL H+DSDRDGFIGEKDFE L+NYAEQRQYTII
Subjt:  MARKSKTYHPRAKLSREQLLVIFRNHDSDKDGRLSTTELTEAFRYIGAFLPSYRARHALFHSDSDRDGFIGEKDFELLLNYAEQRQYTII

A0A5A7VDB9 Putative calcium-binding protein CML271.0e-3990Show/hide
Query:  MARKSKTYHPRAKLSREQLLVIFRNHDSDKDGRLSTTELTEAFRYIGAFLPSYRARHALFHSDSDRDGFIGEKDFELLLNYAEQRQYTII
        M+R+SKTYHPRA+LSREQLL+IFRNHDSDKDGRLSTTELTEAFRYIGAFLP YRARHALFH+DSDRDGFI EKDFELL+NYAEQRQYT+I
Subjt:  MARKSKTYHPRAKLSREQLLVIFRNHDSDKDGRLSTTELTEAFRYIGAFLPSYRARHALFHSDSDRDGFIGEKDFELLLNYAEQRQYTII

A0A5C7H618 Uncharacterized protein5.2e-1244.44Show/hide
Query:  HPRAKLSREQLLVIFRNHDSDKDGRLSTTELTEAFRYIGAFLPSYRARHALFHSDSDRDGFIGEKDFELLLNYAEQRQYTI
        HP    + +QL  IFR  D+D DGRLS  ELT+AF  +G+  P+YRA  AL H+D+++DGF+ E +F+ L+ YA +  + +
Subjt:  HPRAKLSREQLLVIFRNHDSDKDGRLSTTELTEAFRYIGAFLPSYRARHALFHSDSDRDGFIGEKDFELLLNYAEQRQYTI

A0A5N6RQV2 Uncharacterized protein5.2e-1250.67Show/hide
Query:  SREQLLVIFRNHDSDKDGRLSTTELTEAFRYIGAFLPSYRARHALFHSDSDRDGFIGEKDFELLLNYAEQRQYTI
        +R+QL+ IFR+HD D DG+LS  E+  AF Y+G+   SYRA  AL H+DSD DG++GE++ + L++YA +  YTI
Subjt:  SREQLLVIFRNHDSDKDGRLSTTELTEAFRYIGAFLPSYRARHALFHSDSDRDGFIGEKDFELLLNYAEQRQYTI

A5AWP8 Uncharacterized protein8.9e-1244.05Show/hide
Query:  KTYHPRAKLSREQLLVIFRNHDSDKDGRLSTTELTEAFRYIGAFLPSYRARHALFHSDSDRDGFIGEKDFELLLNYAEQRQYTI
        KT   ++ L  +QL  IF+ HD++ DG+L+  EL +AF+++GA +P +RA  AL H+D+D DG I EK+ + L+ YA +  YTI
Subjt:  KTYHPRAKLSREQLLVIFRNHDSDKDGRLSTTELTEAFRYIGAFLPSYRARHALFHSDSDRDGFIGEKDFELLLNYAEQRQYTI

SwissProt top hitse value%identityAlignment
Q39419 Polcalcin Bet v 42.0e-0537.31Show/hide
Query:  HPRAKLSREQLLVIFRNHDSDKDGRLSTTELTEAFRYIGAFLPSYRARHALFHSDSDRDGFIGEKDF
        HP+ K  RE+   IF+  D++ DG++S  EL EA + +G+  P    +H +   D+D DGFI  ++F
Subjt:  HPRAKLSREQLLVIFRNHDSDKDGRLSTTELTEAFRYIGAFLPSYRARHALFHSDSDRDGFIGEKDF

Q8L3R2 Probable calcium-binding protein CML412.7e-0537.7Show/hide
Query:  SREQLLVIFRNHDSDKDGRLSTTELTEAFRYIGAFLPSYRARHALFHSDSDRDGFIGEKDF
        S+E+L  +F + DSD DG++S  EL   F  +G ++    A+ A+   D+D DG +G +DF
Subjt:  SREQLLVIFRNHDSDKDGRLSTTELTEAFRYIGAFLPSYRARHALFHSDSDRDGFIGEKDF

Arabidopsis top hitse value%identityAlignment
AT1G76640.1 Calcium-binding EF-hand family protein1.8e-0434.43Show/hide
Query:  LLVIFRNHDSDKDGRLSTTELTEAFRYIGAFLPSYRARHALFHSDSDRDGFIGEKDFELLL
        L  +F   D+++DGR+S  EL ++F+ +G  +    A  A+  SD D DG +   +F LL+
Subjt:  LLVIFRNHDSDKDGRLSTTELTEAFRYIGAFLPSYRARHALFHSDSDRDGFIGEKDFELLL

AT1G76650.1 calmodulin-like 382.3e-0430.43Show/hide
Query:  QLLVIFRNHDSDKDGRLSTTELTEAFRYIGAFLPSYRARHALFHSDSDRDGFIGEKDFELLLNYAEQRQ
        +L  +F   D+++DGR+S  EL ++F  +G  L    A  A+  SD+D DG +  ++F  L+   ++ +
Subjt:  QLLVIFRNHDSDKDGRLSTTELTEAFRYIGAFLPSYRARHALFHSDSDRDGFIGEKDFELLLNYAEQRQ

AT1G76650.3 calmodulin-like 382.3e-0430.43Show/hide
Query:  QLLVIFRNHDSDKDGRLSTTELTEAFRYIGAFLPSYRARHALFHSDSDRDGFIGEKDFELLLNYAEQRQ
        +L  +F   D+++DGR+S  EL ++F  +G  L    A  A+  SD+D DG +  ++F  L+   ++ +
Subjt:  QLLVIFRNHDSDKDGRLSTTELTEAFRYIGAFLPSYRARHALFHSDSDRDGFIGEKDFELLLNYAEQRQ

AT3G50770.1 calmodulin-like 411.9e-0637.7Show/hide
Query:  SREQLLVIFRNHDSDKDGRLSTTELTEAFRYIGAFLPSYRARHALFHSDSDRDGFIGEKDF
        S+E+L  +F + DSD DG++S  EL   F  +G ++    A+ A+   D+D DG +G +DF
Subjt:  SREQLLVIFRNHDSDKDGRLSTTELTEAFRYIGAFLPSYRARHALFHSDSDRDGFIGEKDF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAGGAAAAGCAAAACGTACCATCCCAGGGCGAAGCTATCAAGAGAGCAGTTACTTGTAATCTTCAGAAACCACGACAGCGACAAGGACGGCCGCCTCAGCACCAC
CGAACTCACCGAAGCCTTCCGATATATCGGCGCCTTTCTCCCGTCCTACAGAGCTCGCCACGCTCTTTTTCATTCCGATTCCGACAGAGATGGATTTATCGGAGAGAAGG
ATTTCGAGTTGCTCCTCAATTATGCCGAGCAACGCCAATATACCATCATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGAGGAAAAGCAAAACGTACCATCCCAGGGCGAAGCTATCAAGAGAGCAGTTACTTGTAATCTTCAGAAACCACGACAGCGACAAGGACGGCCGCCTCAGCACCAC
CGAACTCACCGAAGCCTTCCGATATATCGGCGCCTTTCTCCCGTCCTACAGAGCTCGCCACGCTCTTTTTCATTCCGATTCCGACAGAGATGGATTTATCGGAGAGAAGG
ATTTCGAGTTGCTCCTCAATTATGCCGAGCAACGCCAATATACCATCATTTGA
Protein sequenceShow/hide protein sequence
MARKSKTYHPRAKLSREQLLVIFRNHDSDKDGRLSTTELTEAFRYIGAFLPSYRARHALFHSDSDRDGFIGEKDFELLLNYAEQRQYTII