; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

ClCG05G019910 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG05G019910
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Descriptionprotein DCL, chloroplastic
Genome locationCG_Chr05:32129895..32132473
RNA-Seq ExpressionClCG05G019910
SyntenyClCG05G019910
Gene Ontology termsGO:0009658 - chloroplast organization (biological process)
GO:1901259 - chloroplast rRNA processing (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0003729 - mRNA binding (molecular function)
InterPro domainsIPR044673 - Protein DCL-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064386.1 protein DCL [Cucumis melo var. makuwa]7.5e-11387.23Show/hide
Query:  MAMASILKPPPFVPFHSLNPNFFNSSPVILCFPTHPMTSFHPSTRALKTGPEGSRIRSHEEYSSDLLRKPVVPPAKDLAGPSEDDDSSEESGNDDEEEEE
        MAMASIL   PF PFHSLNPNFFNSSP+ILCFPTHP+ SFHPSTRALKTGPEGSRIRSH+EYSSDLLRKPVVPPAKDLAGPSEDDDSSEESGND+EEE +
Subjt:  MAMASILKPPPFVPFHSLNPNFFNSSPVILCFPTHPMTSFHPSTRALKTGPEGSRIRSHEEYSSDLLRKPVVPPAKDLAGPSEDDDSSEESGNDDEEEEE

Query:  WVDWEDKILEDTVPLVGFVRMILHSGKYGSGDRLSPEHEKTILDRLLPYHPESEKKIGCGIDYITVYLSPYIFVHIGYHPDFESSRCLFIVRKDGELVDF
        WVDWEDKILEDTVPLVGFVRM+LH+GKY SGDRL PEHEKTIL+RLLPYHPESEKKIGCG+DYITV          GYHPDFESSRCLFIVRKDGELVDF
Subjt:  WVDWEDKILEDTVPLVGFVRMILHSGKYGSGDRLSPEHEKTILDRLLPYHPESEKKIGCGIDYITVYLSPYIFVHIGYHPDFESSRCLFIVRKDGELVDF

Query:  SYWKCIKGLIRKKYPLHAESFILRHFRRRRRNFRR
        SYWKCIKGLIRK YPL+AESFILRHFRRRRRN RR
Subjt:  SYWKCIKGLIRKKYPLHAESFILRHFRRRRRNFRR

XP_004141259.1 protein DCL homolog, chloroplastic [Cucumis sativus]9.8e-11386.38Show/hide
Query:  MAMASILKPPPFVPFHSLNPNFFNSSPVILCFPTHPMTSFHPSTRALKTGPEGSRIRSHEEYSSDLLRKPVVPPAKDLAGPSEDDDSSEESGNDDEEEEE
        MAMASILKPPPF PFHSLNPNFFNSSP+ILCFPTHP+ SFHPSTRALKTGPEG R+RSH+EYSSDLLRKPV P AKDLAGPSEDDDSSEESGN+DEEE E
Subjt:  MAMASILKPPPFVPFHSLNPNFFNSSPVILCFPTHPMTSFHPSTRALKTGPEGSRIRSHEEYSSDLLRKPVVPPAKDLAGPSEDDDSSEESGNDDEEEEE

Query:  WVDWEDKILEDTVPLVGFVRMILHSGKYGSGDRLSPEHEKTILDRLLPYHPESEKKIGCGIDYITVYLSPYIFVHIGYHPDFESSRCLFIVRKDGELVDF
        WVDWEDKILEDTVPLVGFVRM+LH+GKY +GDRL PEHEKTIL+RLLPYHPESEKKIGCG+DYITV          GYHPDFESSRCLFIVRKDGE+VDF
Subjt:  WVDWEDKILEDTVPLVGFVRMILHSGKYGSGDRLSPEHEKTILDRLLPYHPESEKKIGCGIDYITVYLSPYIFVHIGYHPDFESSRCLFIVRKDGELVDF

Query:  SYWKCIKGLIRKKYPLHAESFILRHFRRRRRNFRR
        SYWKCIKGLIRK YPL+AESFILRHFRRRRRN RR
Subjt:  SYWKCIKGLIRKKYPLHAESFILRHFRRRRRNFRR

XP_008452556.1 PREDICTED: protein DCL, chloroplastic [Cucumis melo]7.5e-11387.23Show/hide
Query:  MAMASILKPPPFVPFHSLNPNFFNSSPVILCFPTHPMTSFHPSTRALKTGPEGSRIRSHEEYSSDLLRKPVVPPAKDLAGPSEDDDSSEESGNDDEEEEE
        MAMASIL   PF PFHSLNPNFFNSSP+ILCFPTHP+ SFHPSTRALKTGPEGSRIRSH+EYSSDLLRKPVVPPAKDLAGPSEDDDSSEESGND+EEE +
Subjt:  MAMASILKPPPFVPFHSLNPNFFNSSPVILCFPTHPMTSFHPSTRALKTGPEGSRIRSHEEYSSDLLRKPVVPPAKDLAGPSEDDDSSEESGNDDEEEEE

Query:  WVDWEDKILEDTVPLVGFVRMILHSGKYGSGDRLSPEHEKTILDRLLPYHPESEKKIGCGIDYITVYLSPYIFVHIGYHPDFESSRCLFIVRKDGELVDF
        WVDWEDKILEDTVPLVGFVRM+LH+GKY SGDRL PEHEKTIL+RLLPYHPESEKKIGCG+DYITV          GYHPDFESSRCLFIVRKDGELVDF
Subjt:  WVDWEDKILEDTVPLVGFVRMILHSGKYGSGDRLSPEHEKTILDRLLPYHPESEKKIGCGIDYITVYLSPYIFVHIGYHPDFESSRCLFIVRKDGELVDF

Query:  SYWKCIKGLIRKKYPLHAESFILRHFRRRRRNFRR
        SYWKCIKGLIRK YPL+AESFILRHFRRRRRN RR
Subjt:  SYWKCIKGLIRKKYPLHAESFILRHFRRRRRNFRR

XP_022133006.1 protein DCL homolog, chloroplastic [Momordica charantia]5.4e-11186.75Show/hide
Query:  MAMASILKPPPFVPFHSLNPNFFNSSPVILCFPTHPMTSFHPSTRALKTGPEGSRIRSHEEYSSDLLRKPVVPPAKDLAGPSEDDDSSEESGNDDEEEEE
        MAMAS+ KPPPF PFHSLNP+F NSSPVILCFP HPMTS HPS RALKTGPEGSRIRSHEEYSSDLLRKPVVPPAKD A  SEDD+ SEESG D EEEE+
Subjt:  MAMASILKPPPFVPFHSLNPNFFNSSPVILCFPTHPMTSFHPSTRALKTGPEGSRIRSHEEYSSDLLRKPVVPPAKDLAGPSEDDDSSEESGNDDEEEEE

Query:  WVDWEDKILEDTVPLVGFVRMILHSGKYGSGDRLSPEHEKTILDRLLPYHPESEKKIGCGIDYITVYLSPYIFVHIGYHPDFESSRCLFIVRKDGELVDF
        WVDWEDKILEDTVPLVGFVRM+LHSGKYGSGDRLS EHEKTILDRLLPYHPE EKKIGCGIDYIT          IGYHPDFESSRCLFIVRKDGELVDF
Subjt:  WVDWEDKILEDTVPLVGFVRMILHSGKYGSGDRLSPEHEKTILDRLLPYHPESEKKIGCGIDYITVYLSPYIFVHIGYHPDFESSRCLFIVRKDGELVDF

Query:  SYWKCIKGLIRKKYPLHAESFILRHFRRRRRNFR
        SYWKCIKGLIRK YPLHAESFILRHFRRRRRN+R
Subjt:  SYWKCIKGLIRKKYPLHAESFILRHFRRRRRNFR

XP_038897137.1 protein DCL homolog, chloroplastic [Benincasa hispida]9.1e-11991.56Show/hide
Query:  MVMAMASILKPPPFVPFHSLNPNFFNSSPVILCFPTHPMTSFHPSTRALKTGPEGSRIRSHEEYSSDLLRKPVVPPAKDLAGPSEDDDSSEESGNDDEEE
        M+MAMASILKPPPFVP HSLNPNFFNSSPVILCFPT PMTSFH STRALKTGPEGSRIRSHEEYSSDLLRKPVVPPA+DLA  SEDDDSSEESGNDDEEE
Subjt:  MVMAMASILKPPPFVPFHSLNPNFFNSSPVILCFPTHPMTSFHPSTRALKTGPEGSRIRSHEEYSSDLLRKPVVPPAKDLAGPSEDDDSSEESGNDDEEE

Query:  EEWVDWEDKILEDTVPLVGFVRMILHSGKYGSGDRLSPEHEKTILDRLLPYHPESEKKIGCGIDYITVYLSPYIFVHIGYHPDFESSRCLFIVRKDGELV
        E+WVDWEDKILEDTVPLVGFVRM+LHSGKYGSGDRL+PEHEKTILDRLLPYHPESEKKIGCGIDYIT          IGYHPDFESSRCLFIVRKDGELV
Subjt:  EEWVDWEDKILEDTVPLVGFVRMILHSGKYGSGDRLSPEHEKTILDRLLPYHPESEKKIGCGIDYITVYLSPYIFVHIGYHPDFESSRCLFIVRKDGELV

Query:  DFSYWKCIKGLIRKKYPLHAESFILRHFRRRRRNFRR
        DFSYWKCIKGLIRKKYPLHAESFILRHFRRRRRNFRR
Subjt:  DFSYWKCIKGLIRKKYPLHAESFILRHFRRRRRNFRR

TrEMBL top hitse value%identityAlignment
A0A0A0L2D0 Uncharacterized protein4.7e-11386.38Show/hide
Query:  MAMASILKPPPFVPFHSLNPNFFNSSPVILCFPTHPMTSFHPSTRALKTGPEGSRIRSHEEYSSDLLRKPVVPPAKDLAGPSEDDDSSEESGNDDEEEEE
        MAMASILKPPPF PFHSLNPNFFNSSP+ILCFPTHP+ SFHPSTRALKTGPEG R+RSH+EYSSDLLRKPV P AKDLAGPSEDDDSSEESGN+DEEE E
Subjt:  MAMASILKPPPFVPFHSLNPNFFNSSPVILCFPTHPMTSFHPSTRALKTGPEGSRIRSHEEYSSDLLRKPVVPPAKDLAGPSEDDDSSEESGNDDEEEEE

Query:  WVDWEDKILEDTVPLVGFVRMILHSGKYGSGDRLSPEHEKTILDRLLPYHPESEKKIGCGIDYITVYLSPYIFVHIGYHPDFESSRCLFIVRKDGELVDF
        WVDWEDKILEDTVPLVGFVRM+LH+GKY +GDRL PEHEKTIL+RLLPYHPESEKKIGCG+DYITV          GYHPDFESSRCLFIVRKDGE+VDF
Subjt:  WVDWEDKILEDTVPLVGFVRMILHSGKYGSGDRLSPEHEKTILDRLLPYHPESEKKIGCGIDYITVYLSPYIFVHIGYHPDFESSRCLFIVRKDGELVDF

Query:  SYWKCIKGLIRKKYPLHAESFILRHFRRRRRNFRR
        SYWKCIKGLIRK YPL+AESFILRHFRRRRRN RR
Subjt:  SYWKCIKGLIRKKYPLHAESFILRHFRRRRRNFRR

A0A1S3BVA4 protein DCL, chloroplastic3.6e-11387.23Show/hide
Query:  MAMASILKPPPFVPFHSLNPNFFNSSPVILCFPTHPMTSFHPSTRALKTGPEGSRIRSHEEYSSDLLRKPVVPPAKDLAGPSEDDDSSEESGNDDEEEEE
        MAMASIL   PF PFHSLNPNFFNSSP+ILCFPTHP+ SFHPSTRALKTGPEGSRIRSH+EYSSDLLRKPVVPPAKDLAGPSEDDDSSEESGND+EEE +
Subjt:  MAMASILKPPPFVPFHSLNPNFFNSSPVILCFPTHPMTSFHPSTRALKTGPEGSRIRSHEEYSSDLLRKPVVPPAKDLAGPSEDDDSSEESGNDDEEEEE

Query:  WVDWEDKILEDTVPLVGFVRMILHSGKYGSGDRLSPEHEKTILDRLLPYHPESEKKIGCGIDYITVYLSPYIFVHIGYHPDFESSRCLFIVRKDGELVDF
        WVDWEDKILEDTVPLVGFVRM+LH+GKY SGDRL PEHEKTIL+RLLPYHPESEKKIGCG+DYITV          GYHPDFESSRCLFIVRKDGELVDF
Subjt:  WVDWEDKILEDTVPLVGFVRMILHSGKYGSGDRLSPEHEKTILDRLLPYHPESEKKIGCGIDYITVYLSPYIFVHIGYHPDFESSRCLFIVRKDGELVDF

Query:  SYWKCIKGLIRKKYPLHAESFILRHFRRRRRNFRR
        SYWKCIKGLIRK YPL+AESFILRHFRRRRRN RR
Subjt:  SYWKCIKGLIRKKYPLHAESFILRHFRRRRRNFRR

A0A5A7VDC9 Protein DCL3.6e-11387.23Show/hide
Query:  MAMASILKPPPFVPFHSLNPNFFNSSPVILCFPTHPMTSFHPSTRALKTGPEGSRIRSHEEYSSDLLRKPVVPPAKDLAGPSEDDDSSEESGNDDEEEEE
        MAMASIL   PF PFHSLNPNFFNSSP+ILCFPTHP+ SFHPSTRALKTGPEGSRIRSH+EYSSDLLRKPVVPPAKDLAGPSEDDDSSEESGND+EEE +
Subjt:  MAMASILKPPPFVPFHSLNPNFFNSSPVILCFPTHPMTSFHPSTRALKTGPEGSRIRSHEEYSSDLLRKPVVPPAKDLAGPSEDDDSSEESGNDDEEEEE

Query:  WVDWEDKILEDTVPLVGFVRMILHSGKYGSGDRLSPEHEKTILDRLLPYHPESEKKIGCGIDYITVYLSPYIFVHIGYHPDFESSRCLFIVRKDGELVDF
        WVDWEDKILEDTVPLVGFVRM+LH+GKY SGDRL PEHEKTIL+RLLPYHPESEKKIGCG+DYITV          GYHPDFESSRCLFIVRKDGELVDF
Subjt:  WVDWEDKILEDTVPLVGFVRMILHSGKYGSGDRLSPEHEKTILDRLLPYHPESEKKIGCGIDYITVYLSPYIFVHIGYHPDFESSRCLFIVRKDGELVDF

Query:  SYWKCIKGLIRKKYPLHAESFILRHFRRRRRNFRR
        SYWKCIKGLIRK YPL+AESFILRHFRRRRRN RR
Subjt:  SYWKCIKGLIRKKYPLHAESFILRHFRRRRRNFRR

A0A6J1BTU2 protein DCL homolog, chloroplastic2.6e-11186.75Show/hide
Query:  MAMASILKPPPFVPFHSLNPNFFNSSPVILCFPTHPMTSFHPSTRALKTGPEGSRIRSHEEYSSDLLRKPVVPPAKDLAGPSEDDDSSEESGNDDEEEEE
        MAMAS+ KPPPF PFHSLNP+F NSSPVILCFP HPMTS HPS RALKTGPEGSRIRSHEEYSSDLLRKPVVPPAKD A  SEDD+ SEESG D EEEE+
Subjt:  MAMASILKPPPFVPFHSLNPNFFNSSPVILCFPTHPMTSFHPSTRALKTGPEGSRIRSHEEYSSDLLRKPVVPPAKDLAGPSEDDDSSEESGNDDEEEEE

Query:  WVDWEDKILEDTVPLVGFVRMILHSGKYGSGDRLSPEHEKTILDRLLPYHPESEKKIGCGIDYITVYLSPYIFVHIGYHPDFESSRCLFIVRKDGELVDF
        WVDWEDKILEDTVPLVGFVRM+LHSGKYGSGDRLS EHEKTILDRLLPYHPE EKKIGCGIDYIT          IGYHPDFESSRCLFIVRKDGELVDF
Subjt:  WVDWEDKILEDTVPLVGFVRMILHSGKYGSGDRLSPEHEKTILDRLLPYHPESEKKIGCGIDYITVYLSPYIFVHIGYHPDFESSRCLFIVRKDGELVDF

Query:  SYWKCIKGLIRKKYPLHAESFILRHFRRRRRNFR
        SYWKCIKGLIRK YPLHAESFILRHFRRRRRN+R
Subjt:  SYWKCIKGLIRKKYPLHAESFILRHFRRRRRNFR

A0A6J1IM57 protein DCL homolog, chloroplastic-like7.1e-10984.39Show/hide
Query:  MVMAMASILKPPPFVPFHSLNPNFFNSSPVILCFPTHPMTSFHPSTRALKTGPEGSRIRSHEEYSSDLLRKPVVPPAKDLAGPSEDDDSSEESGNDDEEE
        MV+AMASILKPPP VP HSLNPN  N+SPVI+CF THPMTSFHPS RALKTGPEGSRIRSHEEYSSDLLRKPVVPPA DLA PSED +SSEESGN DEEE
Subjt:  MVMAMASILKPPPFVPFHSLNPNFFNSSPVILCFPTHPMTSFHPSTRALKTGPEGSRIRSHEEYSSDLLRKPVVPPAKDLAGPSEDDDSSEESGNDDEEE

Query:  EEWVDWEDKILEDTVPLVGFVRMILHSGKYGSGDRLSPEHEKTILDRLLPYHPESEKKIGCGIDYITVYLSPYIFVHIGYHPDFESSRCLFIVRKDGELV
        EEWVDWED+ILE+TVPLVGFVRM+LHSGKYGSGDRLSPEHEKTILDRLL YHPE EKKIGCGIDYIT          IGYHP+FE SRCLFIVRKDGELV
Subjt:  EEWVDWEDKILEDTVPLVGFVRMILHSGKYGSGDRLSPEHEKTILDRLLPYHPESEKKIGCGIDYITVYLSPYIFVHIGYHPDFESSRCLFIVRKDGELV

Query:  DFSYWKCIKGLIRKKYPLHAESFILRHFRRRRRNFRR
        DFSYWKC++GLIRK YPLHAESFILRHF+RRRR+F R
Subjt:  DFSYWKCIKGLIRKKYPLHAESFILRHFRRRRRNFRR

SwissProt top hitse value%identityAlignment
P85936 Protein DCL, chloroplastic (Fragment)5.9e-0486.36Show/hide
Query:  WVDWEDKILEDTVPLVGFVRMI
        WVDWED+IL+DTVPLV FVRMI
Subjt:  WVDWEDKILEDTVPLVGFVRMI

Q42463 Protein DCL, chloroplastic2.3e-6466.32Show/hide
Query:  ALKTGPEGSRIRSHEEYSSDLLRKPVVPPAKDLAGPSED---DDSSEESGNDDEEEEEWVDWEDKILEDTVPLVGFVRMILHSGKYGSGDRLSPEHEKTI
        A+KTG EG  IRS    +++LLRKPV+    +    SE+   ++S +E G    + E WVDWED+ILEDTVPLVGFVRMILHSGKY  GDRLSP+H++TI
Subjt:  ALKTGPEGSRIRSHEEYSSDLLRKPVVPPAKDLAGPSED---DDSSEESGNDDEEEEEWVDWEDKILEDTVPLVGFVRMILHSGKYGSGDRLSPEHEKTI

Query:  LDRLLPYHPESEKKIGCGIDYITVYLSPYIFVHIGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLIRKKYPLHAESFILRHFRRRRRN
        L RLLPYHPE +KKIG G+DYITV          GYHPDFE+SRCLFIVRKDGE VDFSYWKCIKGLIRK YPL+A+SFILRHFR+RRRN
Subjt:  LDRLLPYHPESEKKIGCGIDYITVYLSPYIFVHIGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLIRKKYPLHAESFILRHFRRRRRN

Q5D869 DNA-directed RNA polymerase V subunit 11.0e-1632.26Show/hide
Query:  PSEDDDSSEESGNDDEEEEEWVDWEDKILEDTVPLVGFVRMILHSGKYGSGDRLSPEHEKTILDRLLPYHPESEKKIGCGIDYITVYLSPYIFVHIGYHP
        P  +D+ +       +  + +   E ++L D  P++  +R I+H   Y  GD +S + +  +L+++L +HP+ E K+G G+D+ITV            H 
Subjt:  PSEDDDSSEESGNDDEEEEEWVDWEDKILEDTVPLVGFVRMILHSGKYGSGDRLSPEHEKTILDRLLPYHPESEKKIGCGIDYITVYLSPYIFVHIGYHP

Query:  DFESSRCLFIVRKDGELVDFSYWKCIKGLIRKKYPLHAESFILRHFRRRRRNFRR
         F  SRC F+V  DG   DFSY K +   + KKYP  AE FI ++F + R +  R
Subjt:  DFESSRCLFIVRKDGELVDFSYWKCIKGLIRKKYPLHAESFILRHFRRRRRNFRR

Q9C642 Protein DCL homolog, chloroplastic1.2e-6862.38Show/hide
Query:  FNSSPVILCFPTHPMTSFHPSTRALKTGPEGSRIRSHEEYSSDLLRKPVVPPAKDLAGPSEDDDSSEESGNDDEEEEEWVDWEDKILEDTVPLVGFVRMI
        F+SSP+ L FP    TS  P  RAL+T  +G++I + E Y S+LLR+P +          E  +  EE   ++ E +E+VDWEDKILE TVPLVGFVRMI
Subjt:  FNSSPVILCFPTHPMTSFHPSTRALKTGPEGSRIRSHEEYSSDLLRKPVVPPAKDLAGPSEDDDSSEESGNDDEEEEEWVDWEDKILEDTVPLVGFVRMI

Query:  LHSGKYGSGDRLSPEHEKTILDRLLPYHPESEKKIGCGIDYITVYLSPYIFVHIGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLIRKKYPLHAESFI
        LHSGKY + DRLSPEHE+TI++ LLPYHPE EKKIGCGIDYI V          G+HPDFESSRC+FIVRKDGE+VDFSYWKCIKGLI+KKYPL+A+SFI
Subjt:  LHSGKYGSGDRLSPEHEKTILDRLLPYHPESEKKIGCGIDYITVYLSPYIFVHIGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLIRKKYPLHAESFI

Query:  LRHFRRRRRN
        LRHFR+RR+N
Subjt:  LRHFRRRRRN

Arabidopsis top hitse value%identityAlignment
AT1G45230.1 Protein of unknown function (DUF3223)8.3e-7062.38Show/hide
Query:  FNSSPVILCFPTHPMTSFHPSTRALKTGPEGSRIRSHEEYSSDLLRKPVVPPAKDLAGPSEDDDSSEESGNDDEEEEEWVDWEDKILEDTVPLVGFVRMI
        F+SSP+ L FP    TS  P  RAL+T  +G++I + E Y S+LLR+P +          E  +  EE   ++ E +E+VDWEDKILE TVPLVGFVRMI
Subjt:  FNSSPVILCFPTHPMTSFHPSTRALKTGPEGSRIRSHEEYSSDLLRKPVVPPAKDLAGPSEDDDSSEESGNDDEEEEEWVDWEDKILEDTVPLVGFVRMI

Query:  LHSGKYGSGDRLSPEHEKTILDRLLPYHPESEKKIGCGIDYITVYLSPYIFVHIGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLIRKKYPLHAESFI
        LHSGKY + DRLSPEHE+TI++ LLPYHPE EKKIGCGIDYI V          G+HPDFESSRC+FIVRKDGE+VDFSYWKCIKGLI+KKYPL+A+SFI
Subjt:  LHSGKYGSGDRLSPEHEKTILDRLLPYHPESEKKIGCGIDYITVYLSPYIFVHIGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLIRKKYPLHAESFI

Query:  LRHFRRRRRN
        LRHFR+RR+N
Subjt:  LRHFRRRRRN

AT1G45230.2 Protein of unknown function (DUF3223)3.2e-6961.9Show/hide
Query:  FNSSPVILCFPTHPMTSFHPSTRALKTGPEGSRIRSHEEYSSDLLRKPVVPPAKDLAGPSEDDDSSEESGNDDEEEEEWVDWEDKILEDTVPLVGFVRMI
        F+SSP+ L FP    TS  P  RAL+T  +G++I + E Y S+LLR+P +          E  +  EE   ++ E +E+VDWEDKILE TVPLVGFVRMI
Subjt:  FNSSPVILCFPTHPMTSFHPSTRALKTGPEGSRIRSHEEYSSDLLRKPVVPPAKDLAGPSEDDDSSEESGNDDEEEEEWVDWEDKILEDTVPLVGFVRMI

Query:  LHSGKYGSGDRLSPEHEKTILDRLLPYHPESEKKIGCGIDYITVYLSPYIFVHIGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLIRKKYPLHAESFI
        LHSGKY + DRLSPEHE+TI++ LLPYHPE EKKIGCGIDYI V+          +HPDFESSRC+FIVRKDGE+VDFSYWKCIKGLI+KKYPL+A+SFI
Subjt:  LHSGKYGSGDRLSPEHEKTILDRLLPYHPESEKKIGCGIDYITVYLSPYIFVHIGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLIRKKYPLHAESFI

Query:  LRHFRRRRRN
        LRHFR+RR+N
Subjt:  LRHFRRRRRN

AT2G40030.1 nuclear RNA polymerase D1B7.4e-1832.26Show/hide
Query:  PSEDDDSSEESGNDDEEEEEWVDWEDKILEDTVPLVGFVRMILHSGKYGSGDRLSPEHEKTILDRLLPYHPESEKKIGCGIDYITVYLSPYIFVHIGYHP
        P  +D+ +       +  + +   E ++L D  P++  +R I+H   Y  GD +S + +  +L+++L +HP+ E K+G G+D+ITV            H 
Subjt:  PSEDDDSSEESGNDDEEEEEWVDWEDKILEDTVPLVGFVRMILHSGKYGSGDRLSPEHEKTILDRLLPYHPESEKKIGCGIDYITVYLSPYIFVHIGYHP

Query:  DFESSRCLFIVRKDGELVDFSYWKCIKGLIRKKYPLHAESFILRHFRRRRRNFRR
         F  SRC F+V  DG   DFSY K +   + KKYP  AE FI ++F + R +  R
Subjt:  DFESSRCLFIVRKDGELVDFSYWKCIKGLIRKKYPLHAESFILRHFRRRRRNFRR

AT3G46630.1 Protein of unknown function (DUF3223)4.5e-3145.93Show/hide
Query:  DDEEEEEWVDWEDKILEDTVPLVGFVRMILHSGKYGSGDRLSPEHEKTILDRLLPYHPESEKKIGCGIDYITVYLSPYIFVHIGYHPDFESSRCLFIVRK
        +D +  +W + E +IL D  P+    + ILHS +Y  G+RL  E EK ++++LLPYHP S+ KIGCG+D          F+ +  HP F  SRCLF+VR 
Subjt:  DDEEEEEWVDWEDKILEDTVPLVGFVRMILHSGKYGSGDRLSPEHEKTILDRLLPYHPESEKKIGCGIDYITVYLSPYIFVHIGYHPDFESSRCLFIVRK

Query:  DGELVDFSYWKCIKGLIRKKYPLHAESFILRHFRR
        DG  +DFSY KC++  +R KYP HAE FI  HF+R
Subjt:  DGELVDFSYWKCIKGLIRKKYPLHAESFILRHFRR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCATGGCCATGGCGTCCATTTTGAAGCCACCGCCATTTGTGCCCTTTCACTCTCTAAATCCAAACTTCTTCAACTCTTCACCAGTGATCTTATGTTTTCCTACACA
CCCAATGACGTCGTTTCACCCATCTACTCGTGCCCTAAAAACTGGCCCTGAAGGCAGTAGAATTCGAAGCCACGAAGAATATAGTTCCGATTTGCTGCGAAAACCGGTTG
TTCCTCCGGCGAAGGACCTTGCTGGACCATCGGAGGATGACGATAGCAGTGAGGAGAGTGGAAATGACGATGAGGAGGAAGAAGAATGGGTTGATTGGGAGGACAAGATT
TTGGAGGATACCGTTCCTCTAGTTGGCTTTGTTAGGATGATTCTTCATTCGGGCAAATATGGAAGTGGGGATAGGTTAAGCCCAGAGCACGAGAAAACAATTCTTGATAG
GTTGCTTCCATATCATCCCGAGAGCGAGAAGAAGATTGGATGTGGGATTGATTATATCACGGTATATCTCTCTCCATACATATTTGTACATATTGGATATCATCCTGATT
TTGAAAGCTCAAGATGTTTATTCATAGTCAGAAAGGATGGAGAGTTGGTTGACTTTTCTTATTGGAAGTGCATCAAGGGTCTGATCAGAAAGAAGTATCCTCTTCATGCA
GAAAGTTTCATTCTCAGGCATTTTCGTCGACGGAGACGCAATTTCCGTCGGTAA
mRNA sequenceShow/hide mRNA sequence
TTCTTCCTCCGTTTTCTCAGAGATTTGGGAGAAAAGCCATGCTCCGCAATCGCAAACTACCATCTCATTCTCAATAGTTTCGAATTCAAGCTCCTTGTTTCAATTGAACA
AGGGCATGGTCATGGCCATGGCGTCCATTTTGAAGCCACCGCCATTTGTGCCCTTTCACTCTCTAAATCCAAACTTCTTCAACTCTTCACCAGTGATCTTATGTTTTCCT
ACACACCCAATGACGTCGTTTCACCCATCTACTCGTGCCCTAAAAACTGGCCCTGAAGGCAGTAGAATTCGAAGCCACGAAGAATATAGTTCCGATTTGCTGCGAAAACC
GGTTGTTCCTCCGGCGAAGGACCTTGCTGGACCATCGGAGGATGACGATAGCAGTGAGGAGAGTGGAAATGACGATGAGGAGGAAGAAGAATGGGTTGATTGGGAGGACA
AGATTTTGGAGGATACCGTTCCTCTAGTTGGCTTTGTTAGGATGATTCTTCATTCGGGCAAATATGGAAGTGGGGATAGGTTAAGCCCAGAGCACGAGAAAACAATTCTT
GATAGGTTGCTTCCATATCATCCCGAGAGCGAGAAGAAGATTGGATGTGGGATTGATTATATCACGGTATATCTCTCTCCATACATATTTGTACATATTGGATATCATCC
TGATTTTGAAAGCTCAAGATGTTTATTCATAGTCAGAAAGGATGGAGAGTTGGTTGACTTTTCTTATTGGAAGTGCATCAAGGGTCTGATCAGAAAGAAGTATCCTCTTC
ATGCAGAAAGTTTCATTCTCAGGCATTTTCGTCGACGGAGACGCAATTTCCGTCGGTAACACATGTAAGATCTGTTAATCATACTATTGTATCATTCAACAGGAGTTCTT
TGAATATCAAAGCTTGAAATTGACCAACCACGGTCATGTGGTTCCCGAGTGTAATGATTTGAAATGTGCGACTCAAGATGGATATAGGGTGAATGTAGACTCTTGCTTGG
GGAAGCTGCTAGTAAAATTCAATTTTGTAAATCCTAACATTTACCTCCAGTTCTCCTTCATCCAATTCATGTTAGTCTCTAGTGGTTAAACCGGTTAGCTCTTGCACTTC
ACAGTTGCTTCTGCCGCCTAAATTCTTTCATGTTCTCTATTAGCAGGAATATATGCTCAAGATCCTTGAACTTTATAGCATTTTGTACTTTGGTCGGTATTTTATGATAT
GAAAACTCTATTGAATTGGAATCAAGTACCC
Protein sequenceShow/hide protein sequence
MVMAMASILKPPPFVPFHSLNPNFFNSSPVILCFPTHPMTSFHPSTRALKTGPEGSRIRSHEEYSSDLLRKPVVPPAKDLAGPSEDDDSSEESGNDDEEEEEWVDWEDKI
LEDTVPLVGFVRMILHSGKYGSGDRLSPEHEKTILDRLLPYHPESEKKIGCGIDYITVYLSPYIFVHIGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLIRKKYPLHA
ESFILRHFRRRRRNFRR