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ClCG05G020460 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG05G020460
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionGlycosyl hydrolase family 35 protein
Genome locationCG_Chr05:32562709..32568461
RNA-Seq ExpressionClCG05G020460
SyntenyClCG05G020460
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8649878.1 hypothetical protein Csa_012522 [Cucumis sativus]1.8e-7078.98Show/hide
Query:  CLFAIPSNRK----LKLQDYEHSNPTRKSIRVGNVNLYDYSPIDPVPSSKRSIKHGPIEHGSPLIPHMPNPSPPDQPQPDSLEVEEDVALNQHHVNPNKC
        C     SN K    +KLQD E SNPTRK++RVG+VNLYDY PIDPVPSSKRSIKHGPIEHGSPLIPHMP+PSPPDQPQP       D+ALN HHVN NKC
Subjt:  CLFAIPSNRK----LKLQDYEHSNPTRKSIRVGNVNLYDYSPIDPVPSSKRSIKHGPIEHGSPLIPHMPNPSPPDQPQPDSLEVEEDVALNQHHVNPNKC

Query:  LSDIPLNRKLKFQTDEHYSLVRKKVRPGDLNLDDYHPIDPVPSSKTSVKPGPIEHGAPLLPHMPNPPPPDQPGDYA
        LSDI LNRKLKFQTDEH +  RKKV P DLNLDDYHPIDPVPSSKTSVKPGPIEHGAPLLPHMPNPPPP QPG YA
Subjt:  LSDIPLNRKLKFQTDEHYSLVRKKVRPGDLNLDDYHPIDPVPSSKTSVKPGPIEHGAPLLPHMPNPPPPDQPGDYA

XP_008452634.1 PREDICTED: uncharacterized protein LOC103493594 isoform X1 [Cucumis melo]3.8e-4183.49Show/hide
Query:  LLHTSSLLLFFSSNINASLTSAMAPNHLHVESNECLFAIPSNRKLKLQDYEHSNPTRKSIRVGNVNLYDYSPIDPVPSSKRSIKHGPIEHGSPLIPHMPN
        LLHTS LLLFF S  NAS TS MA N+LHVESNE LFA PSNRK+KLQD E  NPTRK++RVG+VNLYDY PIDPVPSSKRSIKHGPIEHGSPLIPHMPN
Subjt:  LLHTSSLLLFFSSNINASLTSAMAPNHLHVESNECLFAIPSNRKLKLQDYEHSNPTRKSIRVGNVNLYDYSPIDPVPSSKRSIKHGPIEHGSPLIPHMPN

Query:  PSPPDQPQP
        PSPPDQPQP
Subjt:  PSPPDQPQP

XP_011654146.1 uncharacterized protein LOC105435308 [Cucumis sativus]3.5e-4284.4Show/hide
Query:  LLHTSSLLLFFSSNINASLTSAMAPNHLHVESNECLFAIPSNRKLKLQDYEHSNPTRKSIRVGNVNLYDYSPIDPVPSSKRSIKHGPIEHGSPLIPHMPN
        LLH S LLLFF S  NAS TS MAPNHLHVESNE LFA PSNRK+KLQD E SNPTRK++RVG+VNLYDY PIDPVPSSKRSIKHGPIEHGSPLIPHMP+
Subjt:  LLHTSSLLLFFSSNINASLTSAMAPNHLHVESNECLFAIPSNRKLKLQDYEHSNPTRKSIRVGNVNLYDYSPIDPVPSSKRSIKHGPIEHGSPLIPHMPN

Query:  PSPPDQPQP
        PSPPDQPQP
Subjt:  PSPPDQPQP

XP_038897195.1 uncharacterized protein LOC120085331 [Benincasa hispida]2.6e-4581.82Show/hide
Query:  VMKSFRFPVMLSLLHTSSLLLFFSSNINASLTSAMAPNHLHVESNECLFAIPSNRKLKLQDYEHSNPTRKSIRVGNVNLYDYSPIDPVPSSKRSIKHGPI
        +MKSFRFPVM  LL T   LL FSS  NASLTS M PNHLHVESN+CLFA PSNRK+KLQD  HSNPTR ++RVGN+NLYDYSPIDPVP+SKRSIKHGPI
Subjt:  VMKSFRFPVMLSLLHTSSLLLFFSSNINASLTSAMAPNHLHVESNECLFAIPSNRKLKLQDYEHSNPTRKSIRVGNVNLYDYSPIDPVPSSKRSIKHGPI

Query:  EHGSPLIPHMPNPSPPDQPQP
        EHGSPLIPHMPNPSPPDQPQP
Subjt:  EHGSPLIPHMPNPSPPDQPQP

XP_038899330.1 uncharacterized protein LOC120086661 [Benincasa hispida]2.3e-4194.44Show/hide
Query:  DVALNQHHVNPNKCLSDIPLNRKLKFQTDEHYSLVRKKVRPGDLNLDDYHPIDPVPSSKTSVKPGPIEHGAPLLPHMPNPPPPDQPGDYA
        DVALN HHVNPNKCLSDIPLNRKLKFQTDEHYSL RKKV PGDLNLDDYHPIDPVPSSKTSVKPGPIEHGAPLLPHMPN PPP QPGDYA
Subjt:  DVALNQHHVNPNKCLSDIPLNRKLKFQTDEHYSLVRKKVRPGDLNLDDYHPIDPVPSSKTSVKPGPIEHGAPLLPHMPNPPPPDQPGDYA

TrEMBL top hitse value%identityAlignment
A0A0A0L0G3 Uncharacterized protein1.7e-4284.4Show/hide
Query:  LLHTSSLLLFFSSNINASLTSAMAPNHLHVESNECLFAIPSNRKLKLQDYEHSNPTRKSIRVGNVNLYDYSPIDPVPSSKRSIKHGPIEHGSPLIPHMPN
        LLH S LLLFF S  NAS TS MAPNHLHVESNE LFA PSNRK+KLQD E SNPTRK++RVG+VNLYDY PIDPVPSSKRSIKHGPIEHGSPLIPHMP+
Subjt:  LLHTSSLLLFFSSNINASLTSAMAPNHLHVESNECLFAIPSNRKLKLQDYEHSNPTRKSIRVGNVNLYDYSPIDPVPSSKRSIKHGPIEHGSPLIPHMPN

Query:  PSPPDQPQP
        PSPPDQPQP
Subjt:  PSPPDQPQP

A0A1S3BUB3 uncharacterized protein LOC103493594 isoform X11.9e-4183.49Show/hide
Query:  LLHTSSLLLFFSSNINASLTSAMAPNHLHVESNECLFAIPSNRKLKLQDYEHSNPTRKSIRVGNVNLYDYSPIDPVPSSKRSIKHGPIEHGSPLIPHMPN
        LLHTS LLLFF S  NAS TS MA N+LHVESNE LFA PSNRK+KLQD E  NPTRK++RVG+VNLYDY PIDPVPSSKRSIKHGPIEHGSPLIPHMPN
Subjt:  LLHTSSLLLFFSSNINASLTSAMAPNHLHVESNECLFAIPSNRKLKLQDYEHSNPTRKSIRVGNVNLYDYSPIDPVPSSKRSIKHGPIEHGSPLIPHMPN

Query:  PSPPDQPQP
        PSPPDQPQP
Subjt:  PSPPDQPQP

A0A5A7VB21 Uncharacterized protein1.9e-3887.78Show/hide
Query:  DVALNQHHVNPNKCLSDIPLNRKLKFQTDEHYSLVRKKVRPGDLNLDDYHPIDPVPSSKTSVKPGPIEHGAPLLPHMPNPPPPDQPGDYA
        D+ALNQHHVN  KCLSD+PLNRKLKFQTDEH +L RKKV PGDLNLDDYHPIDPVPSSKTSVKPGPIEH APLLPHMPNPPPP+QPG YA
Subjt:  DVALNQHHVNPNKCLSDIPLNRKLKFQTDEHYSLVRKKVRPGDLNLDDYHPIDPVPSSKTSVKPGPIEHGAPLLPHMPNPPPPDQPGDYA

A0A6J1FL48 uncharacterized protein LOC111446740 isoform X21.3e-3975Show/hide
Query:  MKSFRFPVMLSLLHTSSLLLFFSSNINASLTSAMAPNHLHVESNECLFAIPSNRKLKLQDYEHSNPTRKSIRVGNVNLYDYSPIDPVPSSKRSIKHGPIE
        MK  R  VML +LHTS LLLFFSS+I +S +S M PN  HV SNECL A PSNRKLKL+D + S+P RK++RV NVNLYDYSPIDPVPSSKRSIKHGPIE
Subjt:  MKSFRFPVMLSLLHTSSLLLFFSSNINASLTSAMAPNHLHVESNECLFAIPSNRKLKLQDYEHSNPTRKSIRVGNVNLYDYSPIDPVPSSKRSIKHGPIE

Query:  HGSPLIPHMPNPSPPDQPQP
        H SPLIP+MPNPSPPDQPQP
Subjt:  HGSPLIPHMPNPSPPDQPQP

A0A6J1IVH6 uncharacterized protein LOC111480980 isoform X28.6e-3974.17Show/hide
Query:  MKSFRFPVMLSLLHTSSLLLFFSSNINASLTSAMAPNHLHVESNECLFAIPSNRKLKLQDYEHSNPTRKSIRVGNVNLYDYSPIDPVPSSKRSIKHGPIE
        MK  R  VML +LHTS LL FFSS+I +S +S M PN  HV SNECL A PSN+KLKLQD + S+P RK++RV NVNLYDYSPIDPVPSSKRSIKHGPIE
Subjt:  MKSFRFPVMLSLLHTSSLLLFFSSNINASLTSAMAPNHLHVESNECLFAIPSNRKLKLQDYEHSNPTRKSIRVGNVNLYDYSPIDPVPSSKRSIKHGPIE

Query:  HGSPLIPHMPNPSPPDQPQP
        H SPLIP+MPNPSPPDQPQP
Subjt:  HGSPLIPHMPNPSPPDQPQP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G01075.1 Glycosyl hydrolase family 35 protein1.0e-0758.54Show/hide
Query:  LNLDDYH-PIDPVPSSKTSVKPGPIEHGAPLLPHMPNPPPP
        + L+DY+ P+DP P++K S+KPGPIEHG PL P++P PP P
Subjt:  LNLDDYH-PIDPVPSSKTSVKPGPIEHGAPLLPHMPNPPPP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAACACAATCTTCATTGTTCTTCCGACATCCTCATCGACAAGCCTCCCAAAAAGAGTGTTCGGAAGAAGAGGGTGTTTTCTTCTTTTCATTTTTTGGGTATCATTC
TCATTTGGAGCACTGTATTTGTGGGCATTTGGATGTTATGAAGTCTTTTAGGTTTCCGGTTATGCTCTCTCTGCTTCACACATCTTCATTGCTGCTTTTCTTTTCCAGCA
ATATCAATGCCTCTCTAACTTCCGCAATGGCTCCAAACCACCTCCATGTAGAATCAAATGAATGTTTGTTTGCCATACCATCAAACAGGAAGCTGAAACTGCAGGATTAC
GAACATAGTAACCCGACAAGGAAGAGCATTCGTGTGGGTAACGTAAATCTTTACGACTACAGCCCCATCGATCCAGTTCCAAGCTCAAAGAGATCCATAAAACATGGACC
AATAGAACATGGATCTCCTCTTATACCTCATATGCCAAATCCTTCTCCTCCTGATCAACCACAGCCTGACTCCTTGGAAGTAGAAGAGGATGTGGCTCTGAACCAACACC
ATGTTAATCCAAACAAATGCTTATCTGACATACCATTAAACCGGAAGCTGAAGTTCCAGACTGATGAACACTATAGCCTGGTGAGAAAGAAGGTTCGCCCAGGTGATCTA
AATCTTGATGACTACCATCCCATCGATCCAGTTCCAAGTTCAAAGACATCAGTCAAACCCGGGCCGATAGAGCATGGTGCACCTCTCCTGCCTCATATGCCAAATCCTCC
ACCTCCTGATCAGCCGGGCGATTACGCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCAACACAATCTTCATTGTTCTTCCGACATCCTCATCGACAAGCCTCCCAAAAAGAGTGTTCGGAAGAAGAGGGTGTTTTCTTCTTTTCATTTTTTGGGTATCATTC
TCATTTGGAGCACTGTATTTGTGGGCATTTGGATGTTATGAAGTCTTTTAGGTTTCCGGTTATGCTCTCTCTGCTTCACACATCTTCATTGCTGCTTTTCTTTTCCAGCA
ATATCAATGCCTCTCTAACTTCCGCAATGGCTCCAAACCACCTCCATGTAGAATCAAATGAATGTTTGTTTGCCATACCATCAAACAGGAAGCTGAAACTGCAGGATTAC
GAACATAGTAACCCGACAAGGAAGAGCATTCGTGTGGGTAACGTAAATCTTTACGACTACAGCCCCATCGATCCAGTTCCAAGCTCAAAGAGATCCATAAAACATGGACC
AATAGAACATGGATCTCCTCTTATACCTCATATGCCAAATCCTTCTCCTCCTGATCAACCACAGCCTGACTCCTTGGAAGTAGAAGAGGATGTGGCTCTGAACCAACACC
ATGTTAATCCAAACAAATGCTTATCTGACATACCATTAAACCGGAAGCTGAAGTTCCAGACTGATGAACACTATAGCCTGGTGAGAAAGAAGGTTCGCCCAGGTGATCTA
AATCTTGATGACTACCATCCCATCGATCCAGTTCCAAGTTCAAAGACATCAGTCAAACCCGGGCCGATAGAGCATGGTGCACCTCTCCTGCCTCATATGCCAAATCCTCC
ACCTCCTGATCAGCCGGGCGATTACGCTTAA
Protein sequenceShow/hide protein sequence
MSTQSSLFFRHPHRQASQKECSEEEGVFFFSFFGYHSHLEHCICGHLDVMKSFRFPVMLSLLHTSSLLLFFSSNINASLTSAMAPNHLHVESNECLFAIPSNRKLKLQDY
EHSNPTRKSIRVGNVNLYDYSPIDPVPSSKRSIKHGPIEHGSPLIPHMPNPSPPDQPQPDSLEVEEDVALNQHHVNPNKCLSDIPLNRKLKFQTDEHYSLVRKKVRPGDL
NLDDYHPIDPVPSSKTSVKPGPIEHGAPLLPHMPNPPPPDQPGDYA