; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

ClCG05G020510 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG05G020510
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionLOB domain-containing protein
Genome locationCG_Chr05:32586418..32587667
RNA-Seq ExpressionClCG05G020510
SyntenyClCG05G020510
Gene Ontology termsGO:0010468 - regulation of gene expression (biological process)
InterPro domainsIPR004883 - Lateral organ boundaries, LOB


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7024296.1 LOB domain-containing protein 38, partial [Cucurbita argyrosperma subsp. argyrosperma]1.2e-5882.52Show/hide
Query:  LFQSLLFEACGRTVNPVSGAVGLLYSGNWHVCQAAADTVLNGGVLRPIPGIESSGNPIPNVDDSALTFNTDVWTTTTHNLQFYPSTPSDFRCLPDLAL--
        LFQSLLFEACGRTVNPVSGAVGLL SGNWHVCQ AA+TVL+GGVLRPIPGIE SGNP  NVDDS+LT NTDVWTTT  NLQ YPSTPSDFRCLPDLA+  
Subjt:  LFQSLLFEACGRTVNPVSGAVGLLYSGNWHVCQAAADTVLNGGVLRPIPGIESSGNPIPNVDDSALTFNTDVWTTTTHNLQFYPSTPSDFRCLPDLAL--

Query:  GRAKNHPLENRRSLDSEESVMTSFGSGDLGDQRKETKLLNLFV
        GRAKNH LENRRSLDSE+S+MTSFGS   GD+RK+ KLLNLF+
Subjt:  GRAKNHPLENRRSLDSEESVMTSFGSGDLGDQRKETKLLNLFV

XP_004141401.1 LOB domain-containing protein 39 [Cucumis sativus]2.2e-6889.26Show/hide
Query:  YSLECTLFQSLLFEACGRTVNPVSGAVGLLYSGNWHVCQAAADTVLNGGVLRPIPGIESSGNPIPNVDDSALTFNTDVWTTTT-HNLQFYPSTPSDFRCL
        Y     LFQSLLFEACGRTVNPVSGAVGLL +GNWHVCQAAADT+LNGGVLRPIPGIE S NP PN+DDS+LTFNTDVWTTTT HNLQFYPSTPSDFRCL
Subjt:  YSLECTLFQSLLFEACGRTVNPVSGAVGLLYSGNWHVCQAAADTVLNGGVLRPIPGIESSGNPIPNVDDSALTFNTDVWTTTT-HNLQFYPSTPSDFRCL

Query:  PDLALGRAKN-HPLENRRSLDSEESVMTSFGSGDLGDQRKETKLLNLFV
        PDL+LGRAKN HPLENRRSLDSEESVMTSFGSGDLGDQRKETKLLNLFV
Subjt:  PDLALGRAKN-HPLENRRSLDSEESVMTSFGSGDLGDQRKETKLLNLFV

XP_008452637.1 PREDICTED: LOB domain-containing protein 39-like [Cucumis melo]9.8e-6987.76Show/hide
Query:  YSLECTLFQSLLFEACGRTVNPVSGAVGLLYSGNWHVCQAAADTVLNGGVLRPIPGIESSGNPIPNVDDSALTFNTDVWTTTTHNLQFYPSTPSDFRCLP
        Y     LFQSLLFEACGRTVNPVSGAVGLL SGNWHVCQAAADT+LNGGVLRPIPGIE SGNP PN+DDS+ TFN DVWTTTTHNLQFYPSTPSDFRCLP
Subjt:  YSLECTLFQSLLFEACGRTVNPVSGAVGLLYSGNWHVCQAAADTVLNGGVLRPIPGIESSGNPIPNVDDSALTFNTDVWTTTTHNLQFYPSTPSDFRCLP

Query:  DLALGRAKNHPLENRRSLDSEESVMTSFGSGDLGDQRKETKLLNLFV
        DL L R K HPLENRRSLDSEESVMTSFGSGDLG+QRKETKLLNLFV
Subjt:  DLALGRAKNHPLENRRSLDSEESVMTSFGSGDLGDQRKETKLLNLFV

XP_023535944.1 LOB domain-containing protein 39-like [Cucurbita pepo subsp. pepo]3.7e-6083.92Show/hide
Query:  LFQSLLFEACGRTVNPVSGAVGLLYSGNWHVCQAAADTVLNGGVLRPIPGIESSGNPIPNVDDSALTFNTDVWTTTTHNLQFYPSTPSDFRCLPDLAL--
        LFQSLLFEACGRTVNPVSGAVGLL SGNWHVCQ AADTVL+GGVLRPIPGIE SGNP  NVDDS LTFNTDVWTTT  NLQ YPSTPSDFRCLPDLA+  
Subjt:  LFQSLLFEACGRTVNPVSGAVGLLYSGNWHVCQAAADTVLNGGVLRPIPGIESSGNPIPNVDDSALTFNTDVWTTTTHNLQFYPSTPSDFRCLPDLAL--

Query:  GRAKNHPLENRRSLDSEESVMTSFGSGDLGDQRKETKLLNLFV
        GRAKNH LENRRSLDSE+S+MTSFGS   GD+RK+ KLLNLF+
Subjt:  GRAKNHPLENRRSLDSEESVMTSFGSGDLGDQRKETKLLNLFV

XP_038899091.1 LOB domain-containing protein 39-like [Benincasa hispida]9.8e-6988.44Show/hide
Query:  YSLECTLFQSLLFEACGRTVNPVSGAVGLLYSGNWHVCQAAADTVLNGGVLRPIPGIESSGNPIPNVDDSALTFNTDVWTTTTHNLQFYPSTPSDFRCLP
        Y     LFQSLLFEACGRTVNPVSGAVGLL SGNWHVCQAAADTVLNGGVLRPIPG E SGN  PN+D+S LTFNTDVWTTTTHNLQFYPSTPSDFRCLP
Subjt:  YSLECTLFQSLLFEACGRTVNPVSGAVGLLYSGNWHVCQAAADTVLNGGVLRPIPGIESSGNPIPNVDDSALTFNTDVWTTTTHNLQFYPSTPSDFRCLP

Query:  DLALGRAKNHPLENRRSLDSEESVMTSFGSGDLGDQRKETKLLNLFV
        DL+LGR KNHPLENRRSLDSEESVMTSFGSGD+GD+RKETKLLNLFV
Subjt:  DLALGRAKNHPLENRRSLDSEESVMTSFGSGDLGDQRKETKLLNLFV

TrEMBL top hitse value%identityAlignment
A0A0A0L3S5 LOB domain-containing protein1.1e-6889.26Show/hide
Query:  YSLECTLFQSLLFEACGRTVNPVSGAVGLLYSGNWHVCQAAADTVLNGGVLRPIPGIESSGNPIPNVDDSALTFNTDVWTTTT-HNLQFYPSTPSDFRCL
        Y     LFQSLLFEACGRTVNPVSGAVGLL +GNWHVCQAAADT+LNGGVLRPIPGIE S NP PN+DDS+LTFNTDVWTTTT HNLQFYPSTPSDFRCL
Subjt:  YSLECTLFQSLLFEACGRTVNPVSGAVGLLYSGNWHVCQAAADTVLNGGVLRPIPGIESSGNPIPNVDDSALTFNTDVWTTTT-HNLQFYPSTPSDFRCL

Query:  PDLALGRAKN-HPLENRRSLDSEESVMTSFGSGDLGDQRKETKLLNLFV
        PDL+LGRAKN HPLENRRSLDSEESVMTSFGSGDLGDQRKETKLLNLFV
Subjt:  PDLALGRAKN-HPLENRRSLDSEESVMTSFGSGDLGDQRKETKLLNLFV

A0A1S3BVG9 LOB domain-containing protein 39-like4.8e-6987.76Show/hide
Query:  YSLECTLFQSLLFEACGRTVNPVSGAVGLLYSGNWHVCQAAADTVLNGGVLRPIPGIESSGNPIPNVDDSALTFNTDVWTTTTHNLQFYPSTPSDFRCLP
        Y     LFQSLLFEACGRTVNPVSGAVGLL SGNWHVCQAAADT+LNGGVLRPIPGIE SGNP PN+DDS+ TFN DVWTTTTHNLQFYPSTPSDFRCLP
Subjt:  YSLECTLFQSLLFEACGRTVNPVSGAVGLLYSGNWHVCQAAADTVLNGGVLRPIPGIESSGNPIPNVDDSALTFNTDVWTTTTHNLQFYPSTPSDFRCLP

Query:  DLALGRAKNHPLENRRSLDSEESVMTSFGSGDLGDQRKETKLLNLFV
        DL L R K HPLENRRSLDSEESVMTSFGSGDLG+QRKETKLLNLFV
Subjt:  DLALGRAKNHPLENRRSLDSEESVMTSFGSGDLGDQRKETKLLNLFV

A0A5A7VDI5 LOB domain-containing protein 39-like4.8e-6987.76Show/hide
Query:  YSLECTLFQSLLFEACGRTVNPVSGAVGLLYSGNWHVCQAAADTVLNGGVLRPIPGIESSGNPIPNVDDSALTFNTDVWTTTTHNLQFYPSTPSDFRCLP
        Y     LFQSLLFEACGRTVNPVSGAVGLL SGNWHVCQAAADT+LNGGVLRPIPGIE SGNP PN+DDS+ TFN DVWTTTTHNLQFYPSTPSDFRCLP
Subjt:  YSLECTLFQSLLFEACGRTVNPVSGAVGLLYSGNWHVCQAAADTVLNGGVLRPIPGIESSGNPIPNVDDSALTFNTDVWTTTTHNLQFYPSTPSDFRCLP

Query:  DLALGRAKNHPLENRRSLDSEESVMTSFGSGDLGDQRKETKLLNLFV
        DL L R K HPLENRRSLDSEESVMTSFGSGDLG+QRKETKLLNLFV
Subjt:  DLALGRAKNHPLENRRSLDSEESVMTSFGSGDLGDQRKETKLLNLFV

A0A6J1FEE1 LOB domain-containing protein 38-like1.9e-5781.12Show/hide
Query:  LFQSLLFEACGRTVNPVSGAVGLLYSGNWHVCQAAADTVLNGGVLRPIPGIESSGNPIPNVDDSALTFNTDVWTTTTHNLQFYPSTPSDFRCLPDLALG-
        LFQSLLFEACGRTVNPVSGAVGLL SGNWHVCQ AA+TVL+GGVLRPIPGIE SGNP  NVDDS+LT NTDVWTTT  NLQ YPSTPSDFRCLPDLA+  
Subjt:  LFQSLLFEACGRTVNPVSGAVGLLYSGNWHVCQAAADTVLNGGVLRPIPGIESSGNPIPNVDDSALTFNTDVWTTTTHNLQFYPSTPSDFRCLPDLALG-

Query:  -RAKNHPLENRRSLDSEESVMTSFGSGDLGDQRKETKLLNLFV
         RAKNH  ENRRSLDSE+S+MTSFGS   GD+RK+ KLLNLF+
Subjt:  -RAKNHPLENRRSLDSEESVMTSFGSGDLGDQRKETKLLNLFV

A0A6J1IIW5 LOB domain-containing protein 39-like5.7e-5477.3Show/hide
Query:  LFQSLLFEACGRTVNPVSGAVGLLYSGNWHVCQAAADTVLNGGVLRPIPGIESSGNPIPNVDDSALTFNTDVWTTTTHNLQFYPSTPSDFRCLPDLALGR
        LFQSLLFEACGRTVNPVSGAVGL  SGNWHVCQ AADTVL+GGVLRPIPGIE SGNP  N+DDS+LTFNTDVWTTT  NLQ YPS+PSDFRCLPDLA+  
Subjt:  LFQSLLFEACGRTVNPVSGAVGLLYSGNWHVCQAAADTVLNGGVLRPIPGIESSGNPIPNVDDSALTFNTDVWTTTTHNLQFYPSTPSDFRCLPDLALGR

Query:  AKNHPLENRRSLDSEESVMTSFGSGDLGDQRKETKLLNLFV
              +NRRSLDSE+S+MTSFGS   GD+RK+ KLLNLF+
Subjt:  AKNHPLENRRSLDSEESVMTSFGSGDLGDQRKETKLLNLFV

SwissProt top hitse value%identityAlignment
Q9CA30 LOB domain-containing protein 421.8e-1255.38Show/hide
Query:  LECTLFQSLLFEACGRTVNPVSGAVGLLYSGNWHVCQAAADTVLNGGVL--RPIPGIESSGNPIP
        L   +F+SLL+EACGR VNPV G+VGL++SGNW  CQAA D VLNG  +   P+P   +S   IP
Subjt:  LECTLFQSLLFEACGRTVNPVSGAVGLLYSGNWHVCQAAADTVLNGGVL--RPIPGIESSGNPIP

Q9FN11 LOB domain-containing protein 373.1e-1769.09Show/hide
Query:  LFQSLLFEACGRTVNPVSGAVGLLYSGNWHVCQAAADTVLNGGVLRPIPGIESSG
        LFQSLL+EACGRTVNPV+GA+G+L++GNW++CQAA +TVL GG LRPIP + + G
Subjt:  LFQSLLFEACGRTVNPVSGAVGLLYSGNWHVCQAAADTVLNGGVLRPIPGIESSG

Q9SN23 LOB domain-containing protein 384.8e-1862.32Show/hide
Query:  LFQSLLFEACGRTVNPVSGAVGLLYSGNWHVCQAAADTVLNGGVLRPIPGIESSGN----PIPNVDDSA
        LFQSLL+EACGRTVNPV+GAVGLL++GNW+VCQAA +TVL GG L+PIP + + G     P P  D+++
Subjt:  LFQSLLFEACGRTVNPVSGAVGLLYSGNWHVCQAAADTVLNGGVLRPIPGIESSGN----PIPNVDDSA

Q9SZE8 LOB domain-containing protein 394.2e-2241.01Show/hide
Query:  LFQSLLFEACGRTVNPVSGAVGLLYSGNWHVCQAAADTVLNGGVLRPIPGIESSGNPIPNVDDSALTFNTDVWTTTTHNLQFYPSTPSD---------FR
        LFQSLLFEACGRTVNPV+GAVG+L++ NWHVCQAA +TVL GG LRPI  +  S + + + D+S+  ++ DV    TH+ +F  S  +           R
Subjt:  LFQSLLFEACGRTVNPVSGAVGLLYSGNWHVCQAAADTVLNGGVLRPIPGIESSGNPIPNVDDSALTFNTDVWTTTTHNLQFYPSTPSD---------FR

Query:  CLPDLALGRAKNHPLE----------------------NRRSLDSEESVMTS-FGSGDLGDQRK-----ETKLLNLFV
           D  L    NH L                       +R    SEESV TS + +G  GD ++     E KLLNLFV
Subjt:  CLPDLALGRAKNHPLE----------------------NRRSLDSEESVMTS-FGSGDLGDQRK-----ETKLLNLFV

Q9ZW96 LOB domain-containing protein 401.0e-1259.62Show/hide
Query:  LECTLFQSLLFEACGRTVNPVSGAVGLLYSGNWHVCQAAADTVLNGGVLRPI
        L   +F+SLL+EACGR VNP+ G+VGLL+SGNWH+CQAA + V+ G  + PI
Subjt:  LECTLFQSLLFEACGRTVNPVSGAVGLLYSGNWHVCQAAADTVLNGGVLRPI

Arabidopsis top hitse value%identityAlignment
AT1G67100.1 LOB domain-containing protein 407.4e-1459.62Show/hide
Query:  LECTLFQSLLFEACGRTVNPVSGAVGLLYSGNWHVCQAAADTVLNGGVLRPI
        L   +F+SLL+EACGR VNP+ G+VGLL+SGNWH+CQAA + V+ G  + PI
Subjt:  LECTLFQSLLFEACGRTVNPVSGAVGLLYSGNWHVCQAAADTVLNGGVLRPI

AT1G68510.1 LOB domain-containing protein 421.3e-1355.38Show/hide
Query:  LECTLFQSLLFEACGRTVNPVSGAVGLLYSGNWHVCQAAADTVLNGGVL--RPIPGIESSGNPIP
        L   +F+SLL+EACGR VNPV G+VGL++SGNW  CQAA D VLNG  +   P+P   +S   IP
Subjt:  LECTLFQSLLFEACGRTVNPVSGAVGLLYSGNWHVCQAAADTVLNGGVL--RPIPGIESSGNPIP

AT3G49940.1 LOB domain-containing protein 383.4e-1962.32Show/hide
Query:  LFQSLLFEACGRTVNPVSGAVGLLYSGNWHVCQAAADTVLNGGVLRPIPGIESSGN----PIPNVDDSA
        LFQSLL+EACGRTVNPV+GAVGLL++GNW+VCQAA +TVL GG L+PIP + + G     P P  D+++
Subjt:  LFQSLLFEACGRTVNPVSGAVGLLYSGNWHVCQAAADTVLNGGVLRPIPGIESSGN----PIPNVDDSA

AT4G37540.1 LOB domain-containing protein 393.0e-2341.01Show/hide
Query:  LFQSLLFEACGRTVNPVSGAVGLLYSGNWHVCQAAADTVLNGGVLRPIPGIESSGNPIPNVDDSALTFNTDVWTTTTHNLQFYPSTPSD---------FR
        LFQSLLFEACGRTVNPV+GAVG+L++ NWHVCQAA +TVL GG LRPI  +  S + + + D+S+  ++ DV    TH+ +F  S  +           R
Subjt:  LFQSLLFEACGRTVNPVSGAVGLLYSGNWHVCQAAADTVLNGGVLRPIPGIESSGNPIPNVDDSALTFNTDVWTTTTHNLQFYPSTPSD---------FR

Query:  CLPDLALGRAKNHPLE----------------------NRRSLDSEESVMTS-FGSGDLGDQRK-----ETKLLNLFV
           D  L    NH L                       +R    SEESV TS + +G  GD ++     E KLLNLFV
Subjt:  CLPDLALGRAKNHPLE----------------------NRRSLDSEESVMTS-FGSGDLGDQRK-----ETKLLNLFV

AT5G67420.1 LOB domain-containing protein 372.2e-1869.09Show/hide
Query:  LFQSLLFEACGRTVNPVSGAVGLLYSGNWHVCQAAADTVLNGGVLRPIPGIESSG
        LFQSLL+EACGRTVNPV+GA+G+L++GNW++CQAA +TVL GG LRPIP + + G
Subjt:  LFQSLLFEACGRTVNPVSGAVGLLYSGNWHVCQAAADTVLNGGVLRPIPGIESSG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATAAGTCGCTTGACAACTTCACAAAAATGGTATAGTTTGGAGTGTACTCTGTTTCAGTCTCTGTTATTCGAAGCTTGTGGTCGCACCGTTAACCCAGTTAGCGGAGC
CGTTGGTCTCTTGTACAGTGGGAACTGGCACGTTTGTCAAGCGGCGGCGGATACCGTTCTCAACGGCGGAGTTCTCCGCCCGATACCCGGAATTGAAAGTTCTGGAAATC
CCATCCCCAACGTCGATGATTCCGCACTTACTTTCAATACCGATGTCTGGACAACCACCACACACAATCTTCAATTTTACCCATCTACTCCGTCCGATTTCCGGTGCCTT
CCGGATCTCGCTCTAGGCAGAGCGAAGAATCATCCATTGGAGAATCGGCGGTCTCTTGATTCCGAAGAGTCGGTCATGACCAGCTTCGGAAGCGGCGATCTCGGCGACCA
ACGGAAAGAGACGAAGCTTTTAAACTTATTCGTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGATAAGTCGCTTGACAACTTCACAAAAATGGTATAGTTTGGAGTGTACTCTGTTTCAGTCTCTGTTATTCGAAGCTTGTGGTCGCACCGTTAACCCAGTTAGCGGAGC
CGTTGGTCTCTTGTACAGTGGGAACTGGCACGTTTGTCAAGCGGCGGCGGATACCGTTCTCAACGGCGGAGTTCTCCGCCCGATACCCGGAATTGAAAGTTCTGGAAATC
CCATCCCCAACGTCGATGATTCCGCACTTACTTTCAATACCGATGTCTGGACAACCACCACACACAATCTTCAATTTTACCCATCTACTCCGTCCGATTTCCGGTGCCTT
CCGGATCTCGCTCTAGGCAGAGCGAAGAATCATCCATTGGAGAATCGGCGGTCTCTTGATTCCGAAGAGTCGGTCATGACCAGCTTCGGAAGCGGCGATCTCGGCGACCA
ACGGAAAGAGACGAAGCTTTTAAACTTATTCGTCTGA
Protein sequenceShow/hide protein sequence
MISRLTTSQKWYSLECTLFQSLLFEACGRTVNPVSGAVGLLYSGNWHVCQAAADTVLNGGVLRPIPGIESSGNPIPNVDDSALTFNTDVWTTTTHNLQFYPSTPSDFRCL
PDLALGRAKNHPLENRRSLDSEESVMTSFGSGDLGDQRKETKLLNLFV