; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

ClCG05G021270 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG05G021270
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionGlycine-rich RNA-binding family protein
Genome locationCG_Chr05:33263960..33270178
RNA-Seq ExpressionClCG05G021270
SyntenyClCG05G021270
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR001878 - Zinc finger, CCHC-type
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily
IPR036875 - Zinc finger, CCHC-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8648851.1 hypothetical protein Csa_008374 [Cucumis sativus]6.6e-15696.49Show/hide
Query:  MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGDRIISVNKAEPKMGEDMDHGYRGGGY
        MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFG+RIISVNKAEPKMGEDMDHGYRGGGY
Subjt:  MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGDRIISVNKAEPKMGEDMDHGYRGGGY

Query:  STGGRGSY-GSGGGDRSARQDECFKCGRLGHWARDCPSVGGGRGRGGDSFLGRSRLGDSDRGDRFAGDNNRYVDDRYEGGGRFGDRDRFDSSSRDNKYGS
        STGGRGSY G GGGDRSARQDECFKCGRLGHWARDCPSVGGGRGRGGDSFL RSRLGDSDRGDRFAGD NRYVDDRY+GGGRFGDRDRFDSSSRDNKYGS
Subjt:  STGGRGSY-GSGGGDRSARQDECFKCGRLGHWARDCPSVGGGRGRGGDSFLGRSRLGDSDRGDRFAGDNNRYVDDRYEGGGRFGDRDRFDSSSRDNKYGS

Query:  RDRYVSDRYPPGGDRFGSSRYNNESDRFPVNGYGKDRGYYRDGGPRGIDKYGSGGPARDEGRSYRNRPAPYDRPSRGGRPSSFDR
        RDRYVSDRYPPGGDRFGSSRY N+SDRFPVNGYGKDRGYYRDGGPRG+DKYGSGGPARDEGRSYRNRPAPYDRP+RGGRPSSFDR
Subjt:  RDRYVSDRYPPGGDRFGSSRYNNESDRFPVNGYGKDRGYYRDGGPRGIDKYGSGGPARDEGRSYRNRPAPYDRPSRGGRPSSFDR

XP_004142412.1 glycine-rich RNA-binding protein RZ1C isoform X1 [Cucumis sativus]6.6e-15696.49Show/hide
Query:  MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGDRIISVNKAEPKMGEDMDHGYRGGGY
        MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFG+RIISVNKAEPKMGEDMDHGYRGGGY
Subjt:  MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGDRIISVNKAEPKMGEDMDHGYRGGGY

Query:  STGGRGSY-GSGGGDRSARQDECFKCGRLGHWARDCPSVGGGRGRGGDSFLGRSRLGDSDRGDRFAGDNNRYVDDRYEGGGRFGDRDRFDSSSRDNKYGS
        STGGRGSY G GGGDRSARQDECFKCGRLGHWARDCPSVGGGRGRGGDSFL RSRLGDSDRGDRFAGD NRYVDDRY+GGGRFGDRDRFDSSSRDNKYGS
Subjt:  STGGRGSY-GSGGGDRSARQDECFKCGRLGHWARDCPSVGGGRGRGGDSFLGRSRLGDSDRGDRFAGDNNRYVDDRYEGGGRFGDRDRFDSSSRDNKYGS

Query:  RDRYVSDRYPPGGDRFGSSRYNNESDRFPVNGYGKDRGYYRDGGPRGIDKYGSGGPARDEGRSYRNRPAPYDRPSRGGRPSSFDR
        RDRYVSDRYPPGGDRFGSSRY N+SDRFPVNGYGKDRGYYRDGGPRG+DKYGSGGPARDEGRSYRNRPAPYDRP+RGGRPSSFDR
Subjt:  RDRYVSDRYPPGGDRFGSSRYNNESDRFPVNGYGKDRGYYRDGGPRGIDKYGSGGPARDEGRSYRNRPAPYDRPSRGGRPSSFDR

XP_008446829.1 PREDICTED: glycine-rich RNA-binding protein RZ1C-like isoform X1 [Cucumis melo]5.0e-15696.83Show/hide
Query:  MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGDRIISVNKAEPKMGEDMDHGYRGGGY
        MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFG+RIISVNKAEPKMGEDMDHGYRGGGY
Subjt:  MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGDRIISVNKAEPKMGEDMDHGYRGGGY

Query:  STGGRGSYGSGGGDRSARQDECFKCGRLGHWARDCPSVGGGRGRGGDSFLGRSRLGDSDRGDRFAGDNNRYVDDRYEGGGRFGDRDRFDSSSRDNKYGSR
        STGGRGSYG GGGDRSARQDECFKCGRLGHWARDCPSVGGGRGRGGDSFL RSRLGD DRGDRFAGD NRYVDDRYEGGGRFGDRDRFDSSSRDNKYGSR
Subjt:  STGGRGSYGSGGGDRSARQDECFKCGRLGHWARDCPSVGGGRGRGGDSFLGRSRLGDSDRGDRFAGDNNRYVDDRYEGGGRFGDRDRFDSSSRDNKYGSR

Query:  DRYVSDRYPPGGDRFGSSRYNNESDRFPVNGYGKDRGYYRDGGPRGIDKYGSGGPARDEGRSYRNRPAPYDRPSRGGRPSSFDR
        DRYVSDRYPPGGDRFGS RYNN+SDRFPVNGYGKDRGYYRD GPRG+DKYGSGGPARDEGRSYRNRPAPYDRPSRGGRPSSFDR
Subjt:  DRYVSDRYPPGGDRFGSSRYNNESDRFPVNGYGKDRGYYRDGGPRGIDKYGSGGPARDEGRSYRNRPAPYDRPSRGGRPSSFDR

XP_022956605.1 glycine-rich RNA-binding protein RZ1C-like isoform X1 [Cucurbita moschata]1.1e-14290.14Show/hide
Query:  MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGDRIISVNKAEPKMGEDMDHGYRGGGY
        MAGREEYRIFVGGLSWDITER LENAF+RFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHG+EFG+RIISVNKAEPKMGED+DHGYR    
Subjt:  MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGDRIISVNKAEPKMGEDMDHGYRGGGY

Query:  STGGRGSYGSGGGDRSARQDECFKCGRLGHWARDCPSVGGGRGRGGDSFLGRSRLGDSDRGDRFAGDNNRYVDDRYEGGGRFGDRDRFDSSSRDNKYGSR
                  GGGDRSARQDECFKCGR GHWARDCPSVGGGRGRGGDSFL RSRLGDSDRGDRFAGDNNRYVDDRYEGGGRFGDRDRFD +SRD+KYG+R
Subjt:  STGGRGSYGSGGGDRSARQDECFKCGRLGHWARDCPSVGGGRGRGGDSFLGRSRLGDSDRGDRFAGDNNRYVDDRYEGGGRFGDRDRFDSSSRDNKYGSR

Query:  DRYVSDRYPPGGDRFGSSRYNNESDRFPVNGYGKDRGYYRDGGPRGIDKYGSGGPARDEGRSYRNRPAPYDRPSRGGRPSSFDR
        DRYVS+RYPPGGDRFGSSRYNN+SDRFPVNGYGKDRGYYRDGGPRG+DKYGSGGPARDEGRSYRNRPAPYDRPSRGGRPSSFDR
Subjt:  DRYVSDRYPPGGDRFGSSRYNNESDRFPVNGYGKDRGYYRDGGPRGIDKYGSGGPARDEGRSYRNRPAPYDRPSRGGRPSSFDR

XP_038892830.1 glycine-rich RNA-binding protein RZ1C-like isoform X1 [Benincasa hispida]1.0e-15696.5Show/hide
Query:  MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGDRIISVNKAEPKMGEDMDHGYRGGGY
        MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFG+RIISVNKAEPKMGEDMDHGYRGGGY
Subjt:  MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGDRIISVNKAEPKMGEDMDHGYRGGGY

Query:  STGGRGSY--GSGGGDRSARQDECFKCGRLGHWARDCPSVGGGRGRGGDSFLGRSRLGDSDRGDRFAGDNNRYVDDRYEGGGRFGDRDRFDSSSRDNKYG
        STGGRGSY  G GGGDRSARQDECFKCGRLGHWARDCPSVGGGRGRGGDSFL R+RLGDSDRGDRFAGDNNRYVDDRYEGGGRFGDRDRFDSSSRDNKYG
Subjt:  STGGRGSY--GSGGGDRSARQDECFKCGRLGHWARDCPSVGGGRGRGGDSFLGRSRLGDSDRGDRFAGDNNRYVDDRYEGGGRFGDRDRFDSSSRDNKYG

Query:  SRDRYVSDRYPPGGDRFGSSRYNNESDRFPVNGYGKDRGYYRDGGPRGIDKYGSGGPARDEGRSYRNRPAPYDRPSRGGRPSSFDR
        SRDRYVS+RYPPGGDRFGSSRYNN+SDRFPVNGYGKDRGYYRDGGPRG+DKYGSGGPAR+EGRSYRNRPAPYDRPSRGGRPSSFDR
Subjt:  SRDRYVSDRYPPGGDRFGSSRYNNESDRFPVNGYGKDRGYYRDGGPRGIDKYGSGGPARDEGRSYRNRPAPYDRPSRGGRPSSFDR

TrEMBL top hitse value%identityAlignment
A0A1S3BGN5 glycine-rich RNA-binding protein RZ1C-like isoform X12.4e-15696.83Show/hide
Query:  MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGDRIISVNKAEPKMGEDMDHGYRGGGY
        MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFG+RIISVNKAEPKMGEDMDHGYRGGGY
Subjt:  MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGDRIISVNKAEPKMGEDMDHGYRGGGY

Query:  STGGRGSYGSGGGDRSARQDECFKCGRLGHWARDCPSVGGGRGRGGDSFLGRSRLGDSDRGDRFAGDNNRYVDDRYEGGGRFGDRDRFDSSSRDNKYGSR
        STGGRGSYG GGGDRSARQDECFKCGRLGHWARDCPSVGGGRGRGGDSFL RSRLGD DRGDRFAGD NRYVDDRYEGGGRFGDRDRFDSSSRDNKYGSR
Subjt:  STGGRGSYGSGGGDRSARQDECFKCGRLGHWARDCPSVGGGRGRGGDSFLGRSRLGDSDRGDRFAGDNNRYVDDRYEGGGRFGDRDRFDSSSRDNKYGSR

Query:  DRYVSDRYPPGGDRFGSSRYNNESDRFPVNGYGKDRGYYRDGGPRGIDKYGSGGPARDEGRSYRNRPAPYDRPSRGGRPSSFDR
        DRYVSDRYPPGGDRFGS RYNN+SDRFPVNGYGKDRGYYRD GPRG+DKYGSGGPARDEGRSYRNRPAPYDRPSRGGRPSSFDR
Subjt:  DRYVSDRYPPGGDRFGSSRYNNESDRFPVNGYGKDRGYYRDGGPRGIDKYGSGGPARDEGRSYRNRPAPYDRPSRGGRPSSFDR

A0A5D3CG30 Glycine-rich RNA-binding protein RZ1C-like isoform X12.4e-15696.83Show/hide
Query:  MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGDRIISVNKAEPKMGEDMDHGYRGGGY
        MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFG+RIISVNKAEPKMGEDMDHGYRGGGY
Subjt:  MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGDRIISVNKAEPKMGEDMDHGYRGGGY

Query:  STGGRGSYGSGGGDRSARQDECFKCGRLGHWARDCPSVGGGRGRGGDSFLGRSRLGDSDRGDRFAGDNNRYVDDRYEGGGRFGDRDRFDSSSRDNKYGSR
        STGGRGSYG GGGDRSARQDECFKCGRLGHWARDCPSVGGGRGRGGDSFL RSRLGD DRGDRFAGD NRYVDDRYEGGGRFGDRDRFDSSSRDNKYGSR
Subjt:  STGGRGSYGSGGGDRSARQDECFKCGRLGHWARDCPSVGGGRGRGGDSFLGRSRLGDSDRGDRFAGDNNRYVDDRYEGGGRFGDRDRFDSSSRDNKYGSR

Query:  DRYVSDRYPPGGDRFGSSRYNNESDRFPVNGYGKDRGYYRDGGPRGIDKYGSGGPARDEGRSYRNRPAPYDRPSRGGRPSSFDR
        DRYVSDRYPPGGDRFGS RYNN+SDRFPVNGYGKDRGYYRD GPRG+DKYGSGGPARDEGRSYRNRPAPYDRPSRGGRPSSFDR
Subjt:  DRYVSDRYPPGGDRFGSSRYNNESDRFPVNGYGKDRGYYRDGGPRGIDKYGSGGPARDEGRSYRNRPAPYDRPSRGGRPSSFDR

A0A6J1CFE7 glycine-rich RNA-binding protein RZ1C-like isoform X14.4e-14288.37Show/hide
Query:  MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGDRIISVNKAEPKMGEDMDHGYRGGGY
        MAGREEYRIFVGGLSWDITERQLENAF+RFGKIIDSQIMLEKNTGR RGFGFITFSDRRGMDDAIREMHGQE G+RIISVNKAEPKMGED+DHGYRG GY
Subjt:  MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGDRIISVNKAEPKMGEDMDHGYRGGGY

Query:  STGGR-GSYGSGGGDRSARQDECFKCGRLGHWARDCPSVGGGRGRGGDSFLGRSRLGDSDRGDRFAGDNNRYVDDRYEGGGRFGDRDRFDSSSRDNKYGS
        STGGR GSYG GGGD+SARQDECFKCGRLGHWARDC SVGGGRGR GDSFL RSRLGDSDRGDRFAGDNNRYVDDRYE GGRFGDRDRFD SSRDNKY S
Subjt:  STGGR-GSYGSGGGDRSARQDECFKCGRLGHWARDCPSVGGGRGRGGDSFLGRSRLGDSDRGDRFAGDNNRYVDDRYEGGGRFGDRDRFDSSSRDNKYGS

Query:  RDRYVSDRYPPGGDRFGSSRYNNESDRFPVNGYGKDRG----------------YYRDGGPRGIDKYGSGGPARDEGRSYRNRPAPYDRPSRGGRPSSFD
        RDRYVSDRYPP GDRFGSS YNN+SDRFPVNGYGKDRG                YYRDGGPRGIDKYGSGGPARDEGRSYRNRPAPYDRPSR GRPSSFD
Subjt:  RDRYVSDRYPPGGDRFGSSRYNNESDRFPVNGYGKDRG----------------YYRDGGPRGIDKYGSGGPARDEGRSYRNRPAPYDRPSRGGRPSSFD

Query:  R
        R
Subjt:  R

A0A6J1GY86 glycine-rich RNA-binding protein RZ1C-like isoform X15.3e-14390.14Show/hide
Query:  MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGDRIISVNKAEPKMGEDMDHGYRGGGY
        MAGREEYRIFVGGLSWDITER LENAF+RFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHG+EFG+RIISVNKAEPKMGED+DHGYR    
Subjt:  MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGDRIISVNKAEPKMGEDMDHGYRGGGY

Query:  STGGRGSYGSGGGDRSARQDECFKCGRLGHWARDCPSVGGGRGRGGDSFLGRSRLGDSDRGDRFAGDNNRYVDDRYEGGGRFGDRDRFDSSSRDNKYGSR
                  GGGDRSARQDECFKCGR GHWARDCPSVGGGRGRGGDSFL RSRLGDSDRGDRFAGDNNRYVDDRYEGGGRFGDRDRFD +SRD+KYG+R
Subjt:  STGGRGSYGSGGGDRSARQDECFKCGRLGHWARDCPSVGGGRGRGGDSFLGRSRLGDSDRGDRFAGDNNRYVDDRYEGGGRFGDRDRFDSSSRDNKYGSR

Query:  DRYVSDRYPPGGDRFGSSRYNNESDRFPVNGYGKDRGYYRDGGPRGIDKYGSGGPARDEGRSYRNRPAPYDRPSRGGRPSSFDR
        DRYVS+RYPPGGDRFGSSRYNN+SDRFPVNGYGKDRGYYRDGGPRG+DKYGSGGPARDEGRSYRNRPAPYDRPSRGGRPSSFDR
Subjt:  DRYVSDRYPPGGDRFGSSRYNNESDRFPVNGYGKDRGYYRDGGPRGIDKYGSGGPARDEGRSYRNRPAPYDRPSRGGRPSSFDR

A0A6J1KMD7 glycine-rich RNA-binding protein RZ1C-like isoform X16.9e-14389.79Show/hide
Query:  MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGDRIISVNKAEPKMGEDMDHGYRGGGY
        MAGREEYRIFVGGLSWDITER LENAF+RFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHG+EFG+RIISVNKAEPKMGED+DHGYR    
Subjt:  MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGDRIISVNKAEPKMGEDMDHGYRGGGY

Query:  STGGRGSYGSGGGDRSARQDECFKCGRLGHWARDCPSVGGGRGRGGDSFLGRSRLGDSDRGDRFAGDNNRYVDDRYEGGGRFGDRDRFDSSSRDNKYGSR
                  GGGDRSARQDECFKCGR GHWARDCPSVGGGRGRGGDSFL RSRLGDSDRGDRFAGDNNRYVDDRYEGGGRFGDRDRFD +SRD+KYG+R
Subjt:  STGGRGSYGSGGGDRSARQDECFKCGRLGHWARDCPSVGGGRGRGGDSFLGRSRLGDSDRGDRFAGDNNRYVDDRYEGGGRFGDRDRFDSSSRDNKYGSR

Query:  DRYVSDRYPPGGDRFGSSRYNNESDRFPVNGYGKDRGYYRDGGPRGIDKYGSGGPARDEGRSYRNRPAPYDRPSRGGRPSSFDR
        DRYVS+RYPPGGDRFGSSRYNN+SDRFP+NGYGKDRGYYRDGGPRG+DKYGSGGPARDEGRSYRNRPAPYDRPSRGGRPSSFDR
Subjt:  DRYVSDRYPPGGDRFGSSRYNNESDRFPVNGYGKDRGYYRDGGPRGIDKYGSGGPARDEGRSYRNRPAPYDRPSRGGRPSSFDR

SwissProt top hitse value%identityAlignment
O22703 Glycine-rich RNA-binding protein RZ1B4.0e-7154.18Show/hide
Query:  GREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGDRIISVNKAEPKM-GEDMDHGYRGGGYS
        G  E RIFVGGLSWD+TERQLE+ F+R+GKI + QIM+ ++TGRPRGFGFITF+DRRG DDAI+ MHG+E G+++ISVNKAEPK+ GED+D   +GGGYS
Subjt:  GREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGDRIISVNKAEPKM-GEDMDHGYRGGGYS

Query:  TGGRGSYGSGGGDRSARQDECFKCGRLGHWARDCPSVGGGRGRGGDSFLGRSRLGDSD-RGDRFAGDN------------NRYVDDRYE-GGGRFGDRDR
        + G+G+           +DECFKC R GHWARDCPS G  R R       RSR+GD D   DR+ GD             +RY+D R +  GGR+  RDR
Subjt:  TGGRGSYGSGGGDRSARQDECFKCGRLGHWARDCPSVGGGRGRGGDSFLGRSRLGDSD-RGDRFAGDN------------NRYVDDRYE-GGGRFGDRDR

Query:  FDSSSRDNKYGSRDRYVSDRYPPGGDRFGSSRYNNESDRFPVNGYGKDRGYYRDGGPRGI-DKYGSGGPARDEGRSYRNRPAPYDRPSR-GGRPSSFDR
        FDS    +KY  RD Y  +RY P GDRF S RY            G++R Y RD   R   D+YG  GP RDEGR YR+RP PYDRPSR GGRPSS++R
Subjt:  FDSSSRDNKYGSRDRYVSDRYPPGGDRFGSSRYNNESDRFPVNGYGKDRGYYRDGGPRGI-DKYGSGGPARDEGRSYRNRPAPYDRPSR-GGRPSSFDR

Q03250 Glycine-rich RNA-binding protein 71.4e-2345Show/hide
Query:  AGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGDRIISVNKAEPK-MGEDMDH------G
        +G  EYR FVGGL+W   +R LE AF ++G +IDS+I+ ++ TGR RGFGF+TF D + M DAI  M+GQ+   R I+VN+A+ +  G    H      G
Subjt:  AGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGDRIISVNKAEPK-MGEDMDH------G

Query:  YR---GGGYSTGGRGSYGSGGGDRSARQDECFKCGRLGHWARDCPSVGGGRGRGGDSFLG
        YR   GGGYS GG GSYG GGG R          G          S GGGR  GG  + G
Subjt:  YR---GGGYSTGGRGSYGSGGGDRSARQDECFKCGRLGHWARDCPSVGGGRGRGGDSFLG

Q8RWN5 Glycine-rich RNA-binding protein RZ1C2.4e-7656.41Show/hide
Query:  MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGDRIISVNKAEPKMGED--MDHGYRGG
        MA +E  RIFVGGLS ++T+R LE AF+RFG I+D QIMLE++TGR RGFGFITF+DRR MD++IREMHG++FGDR+ISVN+AEPK+G D    HG RGG
Subjt:  MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGDRIISVNKAEPKMGED--MDHGYRGG

Query:  ---GYSTGGRGSYGSGGGDRS-ARQDECFKCGRLGHWARDCPSVGGGRGRGGDSFLGR-SRLGDSD-RGDRFAG-----DNNRYVDDRYEGGGRFGDRDR
           GYS  G+GS+G GGG      +DECFKCGR+GHWARDCPS GGGRG     F  R S  G SD R DR+A      D  RY+DDRY+G  R+G RDR
Subjt:  ---GYSTGGRGSYGSGGGDRS-ARQDECFKCGRLGHWARDCPSVGGGRGRGGDSFLGR-SRLGDSD-RGDRFAG-----DNNRYVDDRYEGGGRFGDRDR

Query:  FDSSSRDNKYGSRDRYVSDRYPPGGDRF-GSSRYNNESDRFPVNGYGKDRGYYRDGGP-RGIDKYG---SGGPAR---DEGRSYRNRP-APYDRPSRGG-
        FDS      Y  RDRY SDRY    DRF G  RY+  SDR+P   Y K R + RD  P  G D+YG   +GGP R   +EGR +R+R  APY+RPSR G 
Subjt:  FDSSSRDNKYGSRDRYVSDRYPPGGDRF-GSSRYNNESDRFPVNGYGKDRGYYRDGGP-RGIDKYG---SGGPAR---DEGRSYRNRP-APYDRPSRGG-

Query:  -----RPSSFDR
               S+FDR
Subjt:  -----RPSSFDR

Q99070 Glycine-rich RNA-binding protein 23.1e-2342.68Show/hide
Query:  EYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGDRIISVNKAEPKMGEDMDHGYRGGGYSTGGR
        EYR FVGGL+W      LE AF  FG++IDS+++ ++ TGR RGFGF+TFS  + M DAI  M+G+E   R I+VN+A+ + G     GY GGG   GGR
Subjt:  EYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGDRIISVNKAEPKMGEDMDHGYRGGGYSTGGR

Query:  --GSYGSGGGDRSARQDECFKCGRLGHWARDCPSVGGGRGRGGDSFLGRSRLGDSDRGDRFAGD
          G YG GGG    R++     G  G+        GGG G GG  + GR   G    G  + G+
Subjt:  --GSYGSGGGDRSARQDECFKCGRLGHWARDCPSVGGGRGRGGDSFLGRSRLGDSDRGDRFAGD

Q9LIN3 Glycine-rich RNA-binding protein RZ1A1.1e-3337.41Show/hide
Query:  MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGDRIISVNKAEPKMG-----EDMDHGY
        M+   EYR F+GGL+W  ++R L +AF ++G +++++++L+K +GR RGFGFITF +++ MD+AI  M+G +   R I+V+KA+P  G      D D G 
Subjt:  MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGDRIISVNKAEPKMG-----EDMDHGY

Query:  RGGGYSTGGRGSYGSGGGDRSARQDECFKCGRLGHWARDCPSVGGGRGRGGDSFLGRSRLGDSDRGDRFAGDNNRYVDDRYEGGGRFGDR-DRFDSSSRD
          G      R S G GGGD       CFKCG+ GH+AR+CPS                   +S R                +GGGRF  + DR+  SS+D
Subjt:  RGGGYSTGGRGSYGSGGGDRSARQDECFKCGRLGHWARDCPSVGGGRGRGGDSFLGRSRLGDSDRGDRFAGDNNRYVDDRYEGGGRFGDR-DRFDSSSRD

Query:  NKYGSRDRYVSDRYPPGGDRFGS--SRYNNESDRFPVNGYGKDRGYYRDGGPR--GIDKYG--SGGPARDEGR-----SYRNRPAPYDRPSRGG
        ++YG++D    DRY    DR+G+   RY+++ DR+       DR   RDGG    G D+ G  +GG +RD G        R+  APYDRP  GG
Subjt:  NKYGSRDRYVSDRYPPGGDRFGS--SRYNNESDRFPVNGYGKDRGYYRDGGPR--GIDKYG--SGGPARDEGR-----SYRNRPAPYDRPSRGG

Arabidopsis top hitse value%identityAlignment
AT1G60650.1 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain2.8e-7254.18Show/hide
Query:  GREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGDRIISVNKAEPKM-GEDMDHGYRGGGYS
        G  E RIFVGGLSWD+TERQLE+ F+R+GKI + QIM+ ++TGRPRGFGFITF+DRRG DDAI+ MHG+E G+++ISVNKAEPK+ GED+D   +GGGYS
Subjt:  GREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGDRIISVNKAEPKM-GEDMDHGYRGGGYS

Query:  TGGRGSYGSGGGDRSARQDECFKCGRLGHWARDCPSVGGGRGRGGDSFLGRSRLGDSD-RGDRFAGDN------------NRYVDDRYE-GGGRFGDRDR
        + G+G+           +DECFKC R GHWARDCPS G  R R       RSR+GD D   DR+ GD             +RY+D R +  GGR+  RDR
Subjt:  TGGRGSYGSGGGDRSARQDECFKCGRLGHWARDCPSVGGGRGRGGDSFLGRSRLGDSD-RGDRFAGDN------------NRYVDDRYE-GGGRFGDRDR

Query:  FDSSSRDNKYGSRDRYVSDRYPPGGDRFGSSRYNNESDRFPVNGYGKDRGYYRDGGPRGI-DKYGSGGPARDEGRSYRNRPAPYDRPSR-GGRPSSFDR
        FDS    +KY  RD Y  +RY P GDRF S RY            G++R Y RD   R   D+YG  GP RDEGR YR+RP PYDRPSR GGRPSS++R
Subjt:  FDSSSRDNKYGSRDRYVSDRYPPGGDRFGSSRYNNESDRFPVNGYGKDRGYYRDGGPRGI-DKYGSGGPARDEGRSYRNRPAPYDRPSR-GGRPSSFDR

AT1G60650.2 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain2.8e-7254.18Show/hide
Query:  GREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGDRIISVNKAEPKM-GEDMDHGYRGGGYS
        G  E RIFVGGLSWD+TERQLE+ F+R+GKI + QIM+ ++TGRPRGFGFITF+DRRG DDAI+ MHG+E G+++ISVNKAEPK+ GED+D   +GGGYS
Subjt:  GREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGDRIISVNKAEPKM-GEDMDHGYRGGGYS

Query:  TGGRGSYGSGGGDRSARQDECFKCGRLGHWARDCPSVGGGRGRGGDSFLGRSRLGDSD-RGDRFAGDN------------NRYVDDRYE-GGGRFGDRDR
        + G+G+           +DECFKC R GHWARDCPS G  R R       RSR+GD D   DR+ GD             +RY+D R +  GGR+  RDR
Subjt:  TGGRGSYGSGGGDRSARQDECFKCGRLGHWARDCPSVGGGRGRGGDSFLGRSRLGDSD-RGDRFAGDN------------NRYVDDRYE-GGGRFGDRDR

Query:  FDSSSRDNKYGSRDRYVSDRYPPGGDRFGSSRYNNESDRFPVNGYGKDRGYYRDGGPRGI-DKYGSGGPARDEGRSYRNRPAPYDRPSR-GGRPSSFDR
        FDS    +KY  RD Y  +RY P GDRF S RY            G++R Y RD   R   D+YG  GP RDEGR YR+RP PYDRPSR GGRPSS++R
Subjt:  FDSSSRDNKYGSRDRYVSDRYPPGGDRFGSSRYNNESDRFPVNGYGKDRGYYRDGGPRGI-DKYGSGGPARDEGRSYRNRPAPYDRPSR-GGRPSSFDR

AT2G21660.1 cold, circadian rhythm, and rna binding 29.8e-2545Show/hide
Query:  AGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGDRIISVNKAEPK-MGEDMDH------G
        +G  EYR FVGGL+W   +R LE AF ++G +IDS+I+ ++ TGR RGFGF+TF D + M DAI  M+GQ+   R I+VN+A+ +  G    H      G
Subjt:  AGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGDRIISVNKAEPK-MGEDMDH------G

Query:  YR---GGGYSTGGRGSYGSGGGDRSARQDECFKCGRLGHWARDCPSVGGGRGRGGDSFLG
        YR   GGGYS GG GSYG GGG R          G          S GGGR  GG  + G
Subjt:  YR---GGGYSTGGRGSYGSGGGDRSARQDECFKCGRLGHWARDCPSVGGGRGRGGDSFLG

AT3G26420.1 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain8.0e-3537.41Show/hide
Query:  MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGDRIISVNKAEPKMG-----EDMDHGY
        M+   EYR F+GGL+W  ++R L +AF ++G +++++++L+K +GR RGFGFITF +++ MD+AI  M+G +   R I+V+KA+P  G      D D G 
Subjt:  MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGDRIISVNKAEPKMG-----EDMDHGY

Query:  RGGGYSTGGRGSYGSGGGDRSARQDECFKCGRLGHWARDCPSVGGGRGRGGDSFLGRSRLGDSDRGDRFAGDNNRYVDDRYEGGGRFGDR-DRFDSSSRD
          G      R S G GGGD       CFKCG+ GH+AR+CPS                   +S R                +GGGRF  + DR+  SS+D
Subjt:  RGGGYSTGGRGSYGSGGGDRSARQDECFKCGRLGHWARDCPSVGGGRGRGGDSFLGRSRLGDSDRGDRFAGDNNRYVDDRYEGGGRFGDR-DRFDSSSRD

Query:  NKYGSRDRYVSDRYPPGGDRFGS--SRYNNESDRFPVNGYGKDRGYYRDGGPR--GIDKYG--SGGPARDEGR-----SYRNRPAPYDRPSRGG
        ++YG++D    DRY    DR+G+   RY+++ DR+       DR   RDGG    G D+ G  +GG +RD G        R+  APYDRP  GG
Subjt:  NKYGSRDRYVSDRYPPGGDRFGS--SRYNNESDRFPVNGYGKDRGYYRDGGPR--GIDKYG--SGGPARDEGR-----SYRNRPAPYDRPSRGG

AT5G04280.1 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain1.7e-7756.41Show/hide
Query:  MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGDRIISVNKAEPKMGED--MDHGYRGG
        MA +E  RIFVGGLS ++T+R LE AF+RFG I+D QIMLE++TGR RGFGFITF+DRR MD++IREMHG++FGDR+ISVN+AEPK+G D    HG RGG
Subjt:  MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGDRIISVNKAEPKMGED--MDHGYRGG

Query:  ---GYSTGGRGSYGSGGGDRS-ARQDECFKCGRLGHWARDCPSVGGGRGRGGDSFLGR-SRLGDSD-RGDRFAG-----DNNRYVDDRYEGGGRFGDRDR
           GYS  G+GS+G GGG      +DECFKCGR+GHWARDCPS GGGRG     F  R S  G SD R DR+A      D  RY+DDRY+G  R+G RDR
Subjt:  ---GYSTGGRGSYGSGGGDRS-ARQDECFKCGRLGHWARDCPSVGGGRGRGGDSFLGR-SRLGDSD-RGDRFAG-----DNNRYVDDRYEGGGRFGDRDR

Query:  FDSSSRDNKYGSRDRYVSDRYPPGGDRF-GSSRYNNESDRFPVNGYGKDRGYYRDGGP-RGIDKYG---SGGPAR---DEGRSYRNRP-APYDRPSRGG-
        FDS      Y  RDRY SDRY    DRF G  RY+  SDR+P   Y K R + RD  P  G D+YG   +GGP R   +EGR +R+R  APY+RPSR G 
Subjt:  FDSSSRDNKYGSRDRYVSDRYPPGGDRF-GSSRYNNESDRFPVNGYGKDRGYYRDGGP-RGIDKYG---SGGPAR---DEGRSYRNRP-APYDRPSRGG-

Query:  -----RPSSFDR
               S+FDR
Subjt:  -----RPSSFDR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGGAAGAGAAGAATACCGAATATTTGTGGGAGGGTTGTCGTGGGACATCACGGAGCGTCAGCTTGAGAATGCCTTCAATCGGTTCGGCAAAATTATCGATTCTCA
GATCATGTTGGAAAAGAATACAGGCCGCCCACGTGGCTTTGGCTTTATAACATTTTCAGATCGCCGTGGAATGGATGATGCTATCAGAGAGATGCATGGACAAGAATTTG
GAGACCGAATCATTTCAGTGAACAAGGCTGAACCTAAAATGGGAGAAGATATGGACCATGGTTACAGGGGGGGAGGATACTCAACTGGTGGCAGGGGTAGCTATGGGAGT
GGGGGAGGAGATAGATCTGCGAGGCAAGATGAATGCTTCAAATGTGGGCGTCTTGGACACTGGGCTAGAGATTGTCCTTCAGTTGGAGGTGGCCGAGGAAGGGGAGGAGA
TTCATTTCTTGGACGTTCTCGGCTTGGGGATAGTGATCGTGGGGACCGCTTTGCTGGAGATAATAATCGTTATGTGGATGATCGTTATGAAGGTGGTGGGCGCTTTGGAG
ATAGAGACCGTTTTGATAGCAGCAGCAGGGACAACAAATATGGAAGTCGTGATCGCTATGTTAGTGACAGGTATCCACCTGGTGGAGACCGCTTCGGAAGCAGTAGGTAT
AATAATGAATCTGATCGTTTCCCTGTAAATGGCTATGGCAAAGATAGGGGGTATTATAGAGATGGTGGACCTCGTGGCATTGATAAGTATGGAAGCGGCGGTCCAGCACG
CGATGAGGGAAGAAGCTATAGAAACAGACCTGCTCCTTATGATCGCCCTAGCCGTGGTGGGCGGCCATCATCATTTGACCGTTTATCTAAAGTACTACATGCTCGGTGTT
GTGCTGGTAGTTGTCTAGGATCTAGTTGGACAAAGAGGTATGATAGAGGAAGTAAAAATGAGAAGATGGAACTTGGCCTTCCAATGAGCACCAACAACAAATCTGCTCAG
TCAGTTAAGAGTGAAAATGAAAGGGAGGCTTTAATGGAAGAAATTTGGCGACTTGCTTCTCCCATTTTCTCAATATCACCGTTTTCTATATTTCTTCTACCCTCTTGTGC
CTTATTTTCTCTTTAA
mRNA sequenceShow/hide mRNA sequence
TAGGGTTTTTCGGGAATCTCTAGAAACGAGGCGAGGACTCATTCTATCAGAACATTTCACTCTAACCGCACGAACTAGGAGGATTTCTTTTTTCTTTCTGAAATCGGGAG
ATTGATATGGCTGGAAGAGAAGAATACCGAATATTTGTGGGAGGGTTGTCGTGGGACATCACGGAGCGTCAGCTTGAGAATGCCTTCAATCGGTTCGGCAAAATTATCGA
TTCTCAGATCATGTTGGAAAAGAATACAGGCCGCCCACGTGGCTTTGGCTTTATAACATTTTCAGATCGCCGTGGAATGGATGATGCTATCAGAGAGATGCATGGACAAG
AATTTGGAGACCGAATCATTTCAGTGAACAAGGCTGAACCTAAAATGGGAGAAGATATGGACCATGGTTACAGGGGGGGAGGATACTCAACTGGTGGCAGGGGTAGCTAT
GGGAGTGGGGGAGGAGATAGATCTGCGAGGCAAGATGAATGCTTCAAATGTGGGCGTCTTGGACACTGGGCTAGAGATTGTCCTTCAGTTGGAGGTGGCCGAGGAAGGGG
AGGAGATTCATTTCTTGGACGTTCTCGGCTTGGGGATAGTGATCGTGGGGACCGCTTTGCTGGAGATAATAATCGTTATGTGGATGATCGTTATGAAGGTGGTGGGCGCT
TTGGAGATAGAGACCGTTTTGATAGCAGCAGCAGGGACAACAAATATGGAAGTCGTGATCGCTATGTTAGTGACAGGTATCCACCTGGTGGAGACCGCTTCGGAAGCAGT
AGGTATAATAATGAATCTGATCGTTTCCCTGTAAATGGCTATGGCAAAGATAGGGGGTATTATAGAGATGGTGGACCTCGTGGCATTGATAAGTATGGAAGCGGCGGTCC
AGCACGCGATGAGGGAAGAAGCTATAGAAACAGACCTGCTCCTTATGATCGCCCTAGCCGTGGTGGGCGGCCATCATCATTTGACCGTTTATCTAAAGTACTACATGCTC
GGTGTTGTGCTGGTAGTTGTCTAGGATCTAGTTGGACAAAGAGGTATGATAGAGGAAGTAAAAATGAGAAGATGGAACTTGGCCTTCCAATGAGCACCAACAACAAATCT
GCTCAGTCAGTTAAGAGTGAAAATGAAAGGGAGGCTTTAATGGAAGAAATTTGGCGACTTGCTTCTCCCATTTTCTCAATATCACCGTTTTCTATATTTCTTCTACCCTC
TTGTGCCTTATTTTCTCTTTAA
Protein sequenceShow/hide protein sequence
MAGREEYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGDRIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSYGS
GGGDRSARQDECFKCGRLGHWARDCPSVGGGRGRGGDSFLGRSRLGDSDRGDRFAGDNNRYVDDRYEGGGRFGDRDRFDSSSRDNKYGSRDRYVSDRYPPGGDRFGSSRY
NNESDRFPVNGYGKDRGYYRDGGPRGIDKYGSGGPARDEGRSYRNRPAPYDRPSRGGRPSSFDRLSKVLHARCCAGSCLGSSWTKRYDRGSKNEKMELGLPMSTNNKSAQ
SVKSENEREALMEEIWRLASPIFSISPFSIFLLPSCALFSL