CuGenDBv2

Gene ID	ClCG05G021690
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	60S acidic ribosomal protein P2-like
Genome location	CG_Chr05:33767264..33769219
RNA-Seq Expression	ClCG05G021690
Synteny	ClCG05G021690
Gene Ontology terms	GO:0002182 - cytoplasmic translational elongation (biological process) GO:0022625 - cytosolic large ribosomal subunit (cellular component) GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domains	IPR027534 - Ribosomal protein L12/P1/P2 family IPR038716 - Ribosomal protein P1/P2, N-terminal domain IPR044076 - Ribosomal protein P2

Homology

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GenBank top hits

e value

%identity

Alignment

XP_008446770.1 PREDICTED: 60S acidic ribosomal protein P2-4-like [Cucumis melo]

6.1e-44

94.78

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Query:  MKIVAAYLLAVLGGNSSPSAKDLKDILGSVGAEIDEDRIELLLSNVEGKDVTELIASGREKLASVPSGGGAAVAVAAAGGGGGGAAAPAAAESKKEEKVE
        MKIVAAYLLAVLGGN+SPSAKDLKDILGSVGAEIDE+RIELLLSNV+GKDVTELIASGREKLASVPSGGGAAVAV AAGGGGGGAAAPA AE+KKEEKVE
Subjt:  MKIVAAYLLAVLGGNSSPSAKDLKDILGSVGAEIDEDRIELLLSNVEGKDVTELIASGREKLASVPSGGGAAVAVAAAGGGGGGAAAPAAAESKKEEKVE

Query:  EKEESDDDMGFSLFD
        EKEESDDDMGFSLFD
Subjt:  EKEESDDDMGFSLFD

XP_022957078.1 60S acidic ribosomal protein P2-1-like [Cucurbita moschata]

8.0e-44

93.04

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Query:  MKIVAAYLLAVLGGNSSPSAKDLKDILGSVGAEIDEDRIELLLSNVEGKDVTELIASGREKLASVPSGGGAAVAVAAAGGGGGGAAAPAAAESKKEEKVE
        MKIVAAYLLAVLGGN+SPSAKDLKDILGSVGAE+DED+IELL+S+V+GKD+TELIASGREKLASVPSGGGAAVAVAAA GGGGGAAAPAAAESKKEEKVE
Subjt:  MKIVAAYLLAVLGGNSSPSAKDLKDILGSVGAEIDEDRIELLLSNVEGKDVTELIASGREKLASVPSGGGAAVAVAAAGGGGGGAAAPAAAESKKEEKVE

Query:  EKEESDDDMGFSLFD
        EKEESDDDMGFSLFD
Subjt:  EKEESDDDMGFSLFD

XP_022984367.1 60S acidic ribosomal protein P2-4-like [Cucurbita maxima]

1.8e-43

92.17

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Query:  MKIVAAYLLAVLGGNSSPSAKDLKDILGSVGAEIDEDRIELLLSNVEGKDVTELIASGREKLASVPSGGGAAVAVAAAGGGGGGAAAPAAAESKKEEKVE
        MKIVAAYLLAVLGGN+SPSAKDLKDILGSVGAE+DED+IELL+S+V+GKD+TELIASGREKLASVPSGGGAAVAVAA+ GGGGGAAAPAAAESKKEEKVE
Subjt:  MKIVAAYLLAVLGGNSSPSAKDLKDILGSVGAEIDEDRIELLLSNVEGKDVTELIASGREKLASVPSGGGAAVAVAAAGGGGGGAAAPAAAESKKEEKVE

Query:  EKEESDDDMGFSLFD
        EKEESDDDMGFSLFD
Subjt:  EKEESDDDMGFSLFD

XP_023541212.1 60S acidic ribosomal protein P2-2-like [Cucurbita pepo subsp. pepo]

1.8e-43

91.3

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Query:  MKIVAAYLLAVLGGNSSPSAKDLKDILGSVGAEIDEDRIELLLSNVEGKDVTELIASGREKLASVPSGGGAAVAVAAAGGGGGGAAAPAAAESKKEEKVE
        MKIVAAYLLAVLGGNSSPSAKDLK+ILGSVGAE+D++RIELLLS+V+GKDVTELIASGREKLASVPSGGGAA+AVAA GGGGGG AAPAA ESKKEEKVE
Subjt:  MKIVAAYLLAVLGGNSSPSAKDLKDILGSVGAEIDEDRIELLLSNVEGKDVTELIASGREKLASVPSGGGAAVAVAAAGGGGGGAAAPAAAESKKEEKVE

Query:  EKEESDDDMGFSLFD
        EKEESDDDMGFSLFD
Subjt:  EKEESDDDMGFSLFD

XP_038891319.1 60S acidic ribosomal protein P2-2-like [Benincasa hispida]

7.2e-45

94.78

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Query:  MKIVAAYLLAVLGGNSSPSAKDLKDILGSVGAEIDEDRIELLLSNVEGKDVTELIASGREKLASVPSGGGAAVAVAAAGGGGGGAAAPAAAESKKEEKVE
        MKIVAAYLLAVLGGNSSPSAKDLKDILGSVGAEIDE+RIELLLSNV+GKDVTELIASGREKLASVPSGGGA VA AA GGGGGGA APAAAESKKEEKVE
Subjt:  MKIVAAYLLAVLGGNSSPSAKDLKDILGSVGAEIDEDRIELLLSNVEGKDVTELIASGREKLASVPSGGGAAVAVAAAGGGGGGAAAPAAAESKKEEKVE

Query:  EKEESDDDMGFSLFD
        EKEESDDDMGFSLFD
Subjt:  EKEESDDDMGFSLFD

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KRE0 Uncharacterized protein

1.9e-43

92.17

Show/hide

Query:  MKIVAAYLLAVLGGNSSPSAKDLKDILGSVGAEIDEDRIELLLSNVEGKDVTELIASGREKLASVPSGGGAAVAVAAAGGGGGGAAAPAAAESKKEEKVE
        MKIVAAYLLAVLGGNS+PSAKDLKDILGSVGAE+DE+RI LLLSNV+GKD+TELIASGREKLASVPSGGGAAVAV AAGGGGGGAAAPA AE+KKEEKVE
Subjt:  MKIVAAYLLAVLGGNSSPSAKDLKDILGSVGAEIDEDRIELLLSNVEGKDVTELIASGREKLASVPSGGGAAVAVAAAGGGGGGAAAPAAAESKKEEKVE

Query:  EKEESDDDMGFSLFD
        EKEESDDDMGFSLFD
Subjt:  EKEESDDDMGFSLFD

A0A1S3BFW0 60S acidic ribosomal protein P2-4-like

3.0e-44

94.78

Show/hide

Query:  MKIVAAYLLAVLGGNSSPSAKDLKDILGSVGAEIDEDRIELLLSNVEGKDVTELIASGREKLASVPSGGGAAVAVAAAGGGGGGAAAPAAAESKKEEKVE
        MKIVAAYLLAVLGGN+SPSAKDLKDILGSVGAEIDE+RIELLLSNV+GKDVTELIASGREKLASVPSGGGAAVAV AAGGGGGGAAAPA AE+KKEEKVE
Subjt:  MKIVAAYLLAVLGGNSSPSAKDLKDILGSVGAEIDEDRIELLLSNVEGKDVTELIASGREKLASVPSGGGAAVAVAAAGGGGGGAAAPAAAESKKEEKVE

Query:  EKEESDDDMGFSLFD
        EKEESDDDMGFSLFD
Subjt:  EKEESDDDMGFSLFD

A0A6J1FZV9 60S acidic ribosomal protein P2-2-like

1.9e-43

90.43

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Query:  MKIVAAYLLAVLGGNSSPSAKDLKDILGSVGAEIDEDRIELLLSNVEGKDVTELIASGREKLASVPSGGGAAVAVAAAGGGGGGAAAPAAAESKKEEKVE
        MKIVAAYLLAVLGGNSSPSAKDLK+ILGSVGAE+D+++IELLLS+V+GKDVTELIASGREKLASVPSGGGAA+AVAA GGGGGG AAPAA ESKKEEKVE
Subjt:  MKIVAAYLLAVLGGNSSPSAKDLKDILGSVGAEIDEDRIELLLSNVEGKDVTELIASGREKLASVPSGGGAAVAVAAAGGGGGGAAAPAAAESKKEEKVE

Query:  EKEESDDDMGFSLFD
        EKEESDDDMGFSLFD
Subjt:  EKEESDDDMGFSLFD

A0A6J1GZ75 60S acidic ribosomal protein P2-1-like

3.9e-44

93.04

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Query:  MKIVAAYLLAVLGGNSSPSAKDLKDILGSVGAEIDEDRIELLLSNVEGKDVTELIASGREKLASVPSGGGAAVAVAAAGGGGGGAAAPAAAESKKEEKVE
        MKIVAAYLLAVLGGN+SPSAKDLKDILGSVGAE+DED+IELL+S+V+GKD+TELIASGREKLASVPSGGGAAVAVAAA GGGGGAAAPAAAESKKEEKVE
Subjt:  MKIVAAYLLAVLGGNSSPSAKDLKDILGSVGAEIDEDRIELLLSNVEGKDVTELIASGREKLASVPSGGGAAVAVAAAGGGGGGAAAPAAAESKKEEKVE

Query:  EKEESDDDMGFSLFD
        EKEESDDDMGFSLFD
Subjt:  EKEESDDDMGFSLFD

A0A6J1J1Z8 60S acidic ribosomal protein P2-4-like

8.6e-44

92.17

Show/hide

Query:  MKIVAAYLLAVLGGNSSPSAKDLKDILGSVGAEIDEDRIELLLSNVEGKDVTELIASGREKLASVPSGGGAAVAVAAAGGGGGGAAAPAAAESKKEEKVE
        MKIVAAYLLAVLGGN+SPSAKDLKDILGSVGAE+DED+IELL+S+V+GKD+TELIASGREKLASVPSGGGAAVAVAA+ GGGGGAAAPAAAESKKEEKVE
Subjt:  MKIVAAYLLAVLGGNSSPSAKDLKDILGSVGAEIDEDRIELLLSNVEGKDVTELIASGREKLASVPSGGGAAVAVAAAGGGGGGAAAPAAAESKKEEKVE

Query:  EKEESDDDMGFSLFD
        EKEESDDDMGFSLFD
Subjt:  EKEESDDDMGFSLFD

SwissProt top hits

e value

%identity

Alignment

P41099 60S acidic ribosomal protein P2

6.6e-33

73.04

Show/hide

Query:  MKIVAAYLLAVLGGNSSPSAKDLKDILGSVGAEIDEDRIELLLSNVEGKDVTELIASGREKLASVPSGGGAAVAVAAAGGGGGGAAAPAAAESKKEEKVE
        MK++AA+LLA+LGGN+SP+ +DLK IL SVGA+ D+D+IELLLS V+GKD+TELIASGRE+LASVPSGGG AVA AAAGGGGG A A AA E KKEEK E
Subjt:  MKIVAAYLLAVLGGNSSPSAKDLKDILGSVGAEIDEDRIELLLSNVEGKDVTELIASGREKLASVPSGGGAAVAVAAAGGGGGGAAAPAAAESKKEEKVE

Query:  EKEESDDDMGFSLFD
          EESD+++GFSLFD
Subjt:  EKEESDDDMGFSLFD

P46252 60S acidic ribosomal protein P2A

7.3e-32

73.91

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Query:  MKIVAAYLLAVLGGNSSPSAKDLKDILGSVGAEIDEDRIELLLSNVEGKDVTELIASGREKLASVPSGGGAAVAVAAAGGGGGGAAAPAAAESKKEEKVE
        MK VAAYLLAVL GN+SPSA DL  IL SVG E+D +++ELLLS + GKD+TELIA+GREK ASVP GGG  VAVAAA    GGAA   AAE+KKEEKVE
Subjt:  MKIVAAYLLAVLGGNSSPSAKDLKDILGSVGAEIDEDRIELLLSNVEGKDVTELIASGREKLASVPSGGGAAVAVAAAGGGGGGAAAPAAAESKKEEKVE

Query:  EKEESDDDMGFSLFD
        EKEESDDDMGFSLFD
Subjt:  EKEESDDDMGFSLFD

P51407 60S acidic ribosomal protein P2-1

3.5e-34

72.17

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Query:  MKIVAAYLLAVLGGNSSPSAKDLKDILGSVGAEIDEDRIELLLSNVEGKDVTELIASGREKLASVPSGGGAAVAVAAAGGGGGGAAAPAAAESKKEEKVE
        MK+VAA+LLAVL G +SP+  D+KDILGSVGAE ++ +IELLL  V+GKD+ ELIA+GREKLASVPSGGG  VAVA+A  GGGG     AAESKKEEK E
Subjt:  MKIVAAYLLAVLGGNSSPSAKDLKDILGSVGAEIDEDRIELLLSNVEGKDVTELIASGREKLASVPSGGGAAVAVAAAGGGGGGAAAPAAAESKKEEKVE

Query:  EKEESDDDMGFSLFD
        EKEESDDDMGFSLF+
Subjt:  EKEESDDDMGFSLFD

Q9LXM8 60S acidic ribosomal protein P2-4

2.5e-32

71.3

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Query:  MKIVAAYLLAVLGGNSSPSAKDLKDILGSVGAEIDEDRIELLLSNVEGKDVTELIASGREKLASVPSGGGAAVAVAAAGGGGGGAAAPAAAESKKEEKVE
        MK+ AA+LLAVLGGN++PSA ++KDI+G+VGA++D + IELLL  V GKD+ ELIASGREKLASVPSGGG AV+ AA   GGGGAAAPA    KKE K E
Subjt:  MKIVAAYLLAVLGGNSSPSAKDLKDILGSVGAEIDEDRIELLLSNVEGKDVTELIASGREKLASVPSGGGAAVAVAAAGGGGGGAAAPAAAESKKEEKVE

Query:  EKEESDDDMGFSLFD
        EKEESDDDMGFSLF+
Subjt:  EKEESDDDMGFSLFD

Q9SLF7 60S acidic ribosomal protein P2-2

2.7e-34

72.17

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Query:  MKIVAAYLLAVLGGNSSPSAKDLKDILGSVGAEIDEDRIELLLSNVEGKDVTELIASGREKLASVPSGGGAAVAVAAAGGGGGGAAAPAAAESKKEEKVE
        MK+VAAYLLAVL G +SP++ D+K ILGSVGAE ++ +IELLL  V+GKD+ ELIA+GREKLASVPSGGG  VAVA+A  GGGG    +AAESKKEEK E
Subjt:  MKIVAAYLLAVLGGNSSPSAKDLKDILGSVGAEIDEDRIELLLSNVEGKDVTELIASGREKLASVPSGGGAAVAVAAAGGGGGGAAAPAAAESKKEEKVE

Query:  EKEESDDDMGFSLFD
        EKEESDDDMGFSLF+
Subjt:  EKEESDDDMGFSLFD

Arabidopsis top hits

e value

%identity

Alignment

AT2G27710.1 60S acidic ribosomal protein family

1.9e-35

72.17

Show/hide

Query:  MKIVAAYLLAVLGGNSSPSAKDLKDILGSVGAEIDEDRIELLLSNVEGKDVTELIASGREKLASVPSGGGAAVAVAAAGGGGGGAAAPAAAESKKEEKVE
        MK+VAAYLLAVL G +SP++ D+K ILGSVGAE ++ +IELLL  V+GKD+ ELIA+GREKLASVPSGGG  VAVA+A  GGGG    +AAESKKEEK E
Subjt:  MKIVAAYLLAVLGGNSSPSAKDLKDILGSVGAEIDEDRIELLLSNVEGKDVTELIASGREKLASVPSGGGAAVAVAAAGGGGGGAAAPAAAESKKEEKVE

Query:  EKEESDDDMGFSLFD
        EKEESDDDMGFSLF+
Subjt:  EKEESDDDMGFSLFD

AT2G27710.2 60S acidic ribosomal protein family

1.9e-35

72.17

Show/hide

Query:  MKIVAAYLLAVLGGNSSPSAKDLKDILGSVGAEIDEDRIELLLSNVEGKDVTELIASGREKLASVPSGGGAAVAVAAAGGGGGGAAAPAAAESKKEEKVE
        MK+VAAYLLAVL G +SP++ D+K ILGSVGAE ++ +IELLL  V+GKD+ ELIA+GREKLASVPSGGG  VAVA+A  GGGG    +AAESKKEEK E
Subjt:  MKIVAAYLLAVLGGNSSPSAKDLKDILGSVGAEIDEDRIELLLSNVEGKDVTELIASGREKLASVPSGGGAAVAVAAAGGGGGGAAAPAAAESKKEEKVE

Query:  EKEESDDDMGFSLFD
        EKEESDDDMGFSLF+
Subjt:  EKEESDDDMGFSLFD

AT2G27710.3 60S acidic ribosomal protein family

1.9e-35

72.17

Show/hide

Query:  MKIVAAYLLAVLGGNSSPSAKDLKDILGSVGAEIDEDRIELLLSNVEGKDVTELIASGREKLASVPSGGGAAVAVAAAGGGGGGAAAPAAAESKKEEKVE
        MK+VAAYLLAVL G +SP++ D+K ILGSVGAE ++ +IELLL  V+GKD+ ELIA+GREKLASVPSGGG  VAVA+A  GGGG    +AAESKKEEK E
Subjt:  MKIVAAYLLAVLGGNSSPSAKDLKDILGSVGAEIDEDRIELLLSNVEGKDVTELIASGREKLASVPSGGGAAVAVAAAGGGGGGAAAPAAAESKKEEKVE

Query:  EKEESDDDMGFSLFD
        EKEESDDDMGFSLF+
Subjt:  EKEESDDDMGFSLFD

AT2G27720.1 60S acidic ribosomal protein family

2.5e-35

72.17

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Query:  MKIVAAYLLAVLGGNSSPSAKDLKDILGSVGAEIDEDRIELLLSNVEGKDVTELIASGREKLASVPSGGGAAVAVAAAGGGGGGAAAPAAAESKKEEKVE
        MK+VAA+LLAVL G +SP+  D+KDILGSVGAE ++ +IELLL  V+GKD+ ELIA+GREKLASVPSGGG  VAVA+A  GGGG     AAESKKEEK E
Subjt:  MKIVAAYLLAVLGGNSSPSAKDLKDILGSVGAEIDEDRIELLLSNVEGKDVTELIASGREKLASVPSGGGAAVAVAAAGGGGGGAAAPAAAESKKEEKVE

Query:  EKEESDDDMGFSLFD
        EKEESDDDMGFSLF+
Subjt:  EKEESDDDMGFSLFD

AT3G44590.2 60S acidic ribosomal protein family

1.8e-33

71.3

Show/hide

Query:  MKIVAAYLLAVLGGNSSPSAKDLKDILGSVGAEIDEDRIELLLSNVEGKDVTELIASGREKLASVPSGGGAAVAVAAAGGGGGGAAAPAAAESKKEEKVE
        MK+ AA+LLAVLGGN++PSA ++KDI+G+VGA++D + IELLL  V GKD+ ELIASGREKLASVPSGGG AV+ AA   GGGGAAAPA    KKE K E
Subjt:  MKIVAAYLLAVLGGNSSPSAKDLKDILGSVGAEIDEDRIELLLSNVEGKDVTELIASGREKLASVPSGGGAAVAVAAAGGGGGGAAAPAAAESKKEEKVE

Query:  EKEESDDDMGFSLFD
        EKEESDDDMGFSLF+
Subjt:  EKEESDDDMGFSLFD

Sequences

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CDS sequence

Show/hide CDS sequence

ATGAAGATCGTTGCTGCTTATTTGCTCGCCGTTTTGGGAGGCAACTCCAGCCCTTCTGCTAAAGATTTGAAGGATATTCTCGGATCTGTTGGAGCTGAAATTGATGAGGA
CAGAATCGAGCTTCTGCTTTCTAATGTTGAGGGTAAGGACGTTACAGAGCTCATTGCATCCGGTAGAGAAAAGCTAGCATCTGTTCCTTCTGGTGGAGGTGCTGCTGTGG
CAGTTGCTGCTGCCGGAGGTGGTGGTGGTGGTGCTGCGGCCCCTGCTGCAGCTGAGTCAAAGAAAGAGGAGAAGGTTGAAGAGAAAGAAGAATCAGACGATGATATGGGC
TTCAGTCTTTTCGATTAA

mRNA sequence

Show/hide mRNA sequence

ACGAAAAGGAAATCAGAAACCCTACCTCTCCGCTATATAATATAAATAAGAAGCCTTCATCACATTTACAGAACCCTAACTAAACTCTCTTTCTCTGTCTTCCGTTACCG
ATTTGCTGTCTGCAAAGAACGATGAAGATCGTTGCTGCTTATTTGCTCGCCGTTTTGGGAGGCAACTCCAGCCCTTCTGCTAAAGATTTGAAGGATATTCTCGGATCTGT
TGGAGCTGAAATTGATGAGGACAGAATCGAGCTTCTGCTTTCTAATGTTGAGGGTAAGGACGTTACAGAGCTCATTGCATCCGGTAGAGAAAAGCTAGCATCTGTTCCTT
CTGGTGGAGGTGCTGCTGTGGCAGTTGCTGCTGCCGGAGGTGGTGGTGGTGGTGCTGCGGCCCCTGCTGCAGCTGAGTCAAAGAAAGAGGAGAAGGTTGAAGAGAAAGAA
GAATCAGACGATGATATGGGCTTCAGTCTTTTCGATTAAGTATAATGACAAAGTCGAATGTTTGTTCAGAGATTCTTCAAGATTTTAGATTGGAATTTTTGTTTTTCACA
TGTAGTGTTTTAACATTATCGTGGTGTTATGATGAGCCAAATGTTGTACTTCTTTTCAGTTAATGAATTTCGTCGTAATTTTTGGATGCTCTAAAACATGTGTTATTATA
TGGAAAAAAAAAAGGGAATTACTGCTATATCTTGAATTTGAATCTGGAGGCCATCGGGAATTTTCAGT

Protein sequence

Show/hide protein sequence

MKIVAAYLLAVLGGNSSPSAKDLKDILGSVGAEIDEDRIELLLSNVEGKDVTELIASGREKLASVPSGGGAAVAVAAAGGGGGGAAAPAAAESKKEEKVEEKEESDDDMG
FSLFD

ClCG05G021690 (gene) of Watermelon (Charleston Gray) v2.5 genome