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ClCG05G022780 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG05G022780
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Descriptionprotein NIM1-INTERACTING 2
Genome locationCG_Chr05:34649132..34649611
RNA-Seq ExpressionClCG05G022780
SyntenyClCG05G022780
Gene Ontology termsGO:0010112 - regulation of systemic acquired resistance (biological process)
InterPro domainsIPR034577 - Protein NIM1-INTERACTING 2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6573971.1 hypothetical protein SDJN03_27858, partial [Cucurbita argyrosperma subsp. sororia]1.1e-3260.65Show/hide
Query:  MPFELFPATRSTEKGKRKQ------GYD--AGSDSQKDAVAGRGKEAETASDEEVEEFFSILKRLHAASKHIEKIDGASRLLMGKRSKLMKSSEEEADEV
        MPFELFP++R T++GKRK+       YD  A + +QK+ VA RG E E  SDEEVEEFF+ILKRLHAA+K+IEKIDGA  LLMGKR+K  K+SE+E D V
Subjt:  MPFELFPATRSTEKGKRKQ------GYD--AGSDSQKDAVAGRGKEAETASDEEVEEFFSILKRLHAASKHIEKIDGASRLLMGKRSKLMKSSEEEADEV

Query:  EIRAERIPSHKLDRN--LDLDLNLEPVCVELDGK--TSRSLNPKPALESEAGVRR
        EIR +RIP  KLDRN  LDLDLNLEP  VE DGK   SRS N K   +  A   R
Subjt:  EIRAERIPSHKLDRN--LDLDLNLEPVCVELDGK--TSRSLNPKPALESEAGVRR

KGN52074.1 hypothetical protein Csa_008594 [Cucumis sativus]4.5e-4573.38Show/hide
Query:  MPFELFPATRSTEKGKRKQGYDAGSDSQKDAVAGRGKEAETASDEEVEEFFSILKRLHAASKHIEKIDGASRLLMGKRSKLMKSSEEEADEVEIRAERIP
        MPFELFPA+RSTE+GKRK+G DAG  +QKD  A  G+EAETA+DEEVEEFFSILKRLHAA+K+IEKIDGAS LLMGKR K MKS+EEE DEV I+AERIP
Subjt:  MPFELFPATRSTEKGKRKQGYDAGSDSQKDAVAGRGKEAETASDEEVEEFFSILKRLHAASKHIEKIDGASRLLMGKRSKLMKSSEEEADEVEIRAERIP

Query:  SHKLDRNLDLDLNLEPVCVELDGKTSRSLNPKPALESEA
          KLDRNLDLDLNLEPVCVE +GK+    N KP+    A
Subjt:  SHKLDRNLDLDLNLEPVCVELDGKTSRSLNPKPALESEA

XP_008446591.1 PREDICTED: protein NIM1-INTERACTING 2 [Cucumis melo]6.2e-4773.76Show/hide
Query:  MPFELFPATRSTEKGKRKQGYDAGSDSQKDAVAGRGKEAETASDEEVEEFFSILKRLHAASKHIEKIDGASRLLMGKRSKLMKSSEEEADEVEIRAERIP
        MPFELFP +RST++GKRK+G DAG+ +QKD V   GKEAETA+DEEVEEFFSILKRLHAA+K+IEKIDGAS LLMGKRSK MKS+EEE DEV IR ERIP
Subjt:  MPFELFPATRSTEKGKRKQGYDAGSDSQKDAVAGRGKEAETASDEEVEEFFSILKRLHAASKHIEKIDGASRLLMGKRSKLMKSSEEEADEVEIRAERIP

Query:  SHKLDRNLDLDLNLEPVCVELDGKTSRSLNPKPALESEAGV
          KLDRNLDLDLNLEPVCVE +GK+ +S N KP+    A V
Subjt:  SHKLDRNLDLDLNLEPVCVELDGKTSRSLNPKPALESEAGV

XP_023542001.1 uncharacterized protein LOC111801981 [Cucurbita pepo subsp. pepo]4.2e-3566.18Show/hide
Query:  MPFELFPATRSTEKGKRKQ------GYD--AGSDSQKDAVAGRGKEAETASDEEVEEFFSILKRLHAASKHIEKIDGASRLLMGKRSKLMKSSEEEADEV
        MPFELFP++R T++GKRK+       YD  A + +QK+ VA RG E E  SDEEVEEFF+ILKRLHAA+K+IEKIDGA  LLMGKR+K  K+SE+E D V
Subjt:  MPFELFPATRSTEKGKRKQ------GYD--AGSDSQKDAVAGRGKEAETASDEEVEEFFSILKRLHAASKHIEKIDGASRLLMGKRSKLMKSSEEEADEV

Query:  EIRAERIPSHKLDRNLDLDLNLEPVCVELDGKTSRS
        EIR +RIP  KLDRNLDLDLNLEP CVE DGK  RS
Subjt:  EIRAERIPSHKLDRNLDLDLNLEPVCVELDGKTSRS

XP_038892789.1 protein NIM1-INTERACTING 2 [Benincasa hispida]6.0e-5079.86Show/hide
Query:  MPFELFPATRSTEKGKRKQGYDAGSDSQKDAVAGRGKEAETASDEEVEEFFSILKRLHAASKHIEKIDGASRLLMGKRSKLMKSSEEEADEVEIRAERIP
        MPFELFPA+RST++GKRK+  DAG+ SQ+DAVA RGKEAETA+DEEVEEFFSILKRLHAA+K+IEKIDGASRLLMGKRSK  KSSEEEADEVEIRAE+IP
Subjt:  MPFELFPATRSTEKGKRKQGYDAGSDSQKDAVAGRGKEAETASDEEVEEFFSILKRLHAASKHIEKIDGASRLLMGKRSKLMKSSEEEADEVEIRAERIP

Query:  SHKLDRNLDLDLNLEPVCVELDGKTSRSLNPKPALESEA
         HKLDRNLDLDLNLEP CVE D KTSRS N K +    A
Subjt:  SHKLDRNLDLDLNLEPVCVELDGKTSRSLNPKPALESEA

TrEMBL top hitse value%identityAlignment
A0A0A0KT67 Uncharacterized protein2.2e-4573.38Show/hide
Query:  MPFELFPATRSTEKGKRKQGYDAGSDSQKDAVAGRGKEAETASDEEVEEFFSILKRLHAASKHIEKIDGASRLLMGKRSKLMKSSEEEADEVEIRAERIP
        MPFELFPA+RSTE+GKRK+G DAG  +QKD  A  G+EAETA+DEEVEEFFSILKRLHAA+K+IEKIDGAS LLMGKR K MKS+EEE DEV I+AERIP
Subjt:  MPFELFPATRSTEKGKRKQGYDAGSDSQKDAVAGRGKEAETASDEEVEEFFSILKRLHAASKHIEKIDGASRLLMGKRSKLMKSSEEEADEVEIRAERIP

Query:  SHKLDRNLDLDLNLEPVCVELDGKTSRSLNPKPALESEA
          KLDRNLDLDLNLEPVCVE +GK+    N KP+    A
Subjt:  SHKLDRNLDLDLNLEPVCVELDGKTSRSLNPKPALESEA

A0A1S3BFE7 protein NIM1-INTERACTING 23.0e-4773.76Show/hide
Query:  MPFELFPATRSTEKGKRKQGYDAGSDSQKDAVAGRGKEAETASDEEVEEFFSILKRLHAASKHIEKIDGASRLLMGKRSKLMKSSEEEADEVEIRAERIP
        MPFELFP +RST++GKRK+G DAG+ +QKD V   GKEAETA+DEEVEEFFSILKRLHAA+K+IEKIDGAS LLMGKRSK MKS+EEE DEV IR ERIP
Subjt:  MPFELFPATRSTEKGKRKQGYDAGSDSQKDAVAGRGKEAETASDEEVEEFFSILKRLHAASKHIEKIDGASRLLMGKRSKLMKSSEEEADEVEIRAERIP

Query:  SHKLDRNLDLDLNLEPVCVELDGKTSRSLNPKPALESEAGV
          KLDRNLDLDLNLEPVCVE +GK+ +S N KP+    A V
Subjt:  SHKLDRNLDLDLNLEPVCVELDGKTSRSLNPKPALESEAGV

A0A5A7SZN6 Protein NIM1-INTERACTING 23.0e-4773.76Show/hide
Query:  MPFELFPATRSTEKGKRKQGYDAGSDSQKDAVAGRGKEAETASDEEVEEFFSILKRLHAASKHIEKIDGASRLLMGKRSKLMKSSEEEADEVEIRAERIP
        MPFELFP +RST++GKRK+G DAG+ +QKD V   GKEAETA+DEEVEEFFSILKRLHAA+K+IEKIDGAS LLMGKRSK MKS+EEE DEV IR ERIP
Subjt:  MPFELFPATRSTEKGKRKQGYDAGSDSQKDAVAGRGKEAETASDEEVEEFFSILKRLHAASKHIEKIDGASRLLMGKRSKLMKSSEEEADEVEIRAERIP

Query:  SHKLDRNLDLDLNLEPVCVELDGKTSRSLNPKPALESEAGV
          KLDRNLDLDLNLEPVCVE +GK+ +S N KP+    A V
Subjt:  SHKLDRNLDLDLNLEPVCVELDGKTSRSLNPKPALESEAGV

A0A6J1FZ89 uncharacterized protein LOC1114492601.2e-3260Show/hide
Query:  MPFELFPATRSTEKGKRKQ------GYD--AGSDSQKDAVAGRGKEAETASDEEVEEFFSILKRLHAASKHIEKIDGASRLLMGKRSKLMKSSEEEADEV
        MPFELFP++R T++GKRK+       YD  A + +QK+ VA RG E +  SDEEVEEFF+ILKRLHAA+K+IEKIDGA  LLMGKR+K  K+SE+E D V
Subjt:  MPFELFPATRSTEKGKRKQ------GYD--AGSDSQKDAVAGRGKEAETASDEEVEEFFSILKRLHAASKHIEKIDGASRLLMGKRSKLMKSSEEEADEV

Query:  EIRAERIPSHKLDRN--LDLDLNLEPVCVELDGK--TSRSLNPKPALESEAGVRR
        EIR +RIP  KLDRN  LDLDLNLEP  VE DGK   SRS N K   +  A   R
Subjt:  EIRAERIPSHKLDRN--LDLDLNLEPVCVELDGK--TSRSLNPKPALESEAGVRR

A0A6J1HXL3 uncharacterized protein LOC1114675667.0e-2862.99Show/hide
Query:  MPFELFPATRSTEKGKRKQ------GYDAG---SDSQKDAVAGRGKEAETASDEEVEEFFSILKRLHAASKHIEKIDGASRLLMGKRSKLMKSSEEEADE
        MPFELFP++R+ ++GKRK+       Y+A    + +QK  VA RGKE E  SDEEVEEFF+ILKRLHAA+K+IEKIDGA   LMGKR+K  K+SE+E D 
Subjt:  MPFELFPATRSTEKGKRKQ------GYDAG---SDSQKDAVAGRGKEAETASDEEVEEFFSILKRLHAASKHIEKIDGASRLLMGKRSKLMKSSEEEADE

Query:  VEIRAERIPSHKLDRN--LDLDLNLEP
        VEIR +RIP  KLDRN  LDLDLNLEP
Subjt:  VEIRAERIPSHKLDRN--LDLDLNLEP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCGTTTGAGTTGTTTCCGGCGACTCGGAGTACGGAGAAAGGGAAAAGAAAGCAGGGATACGACGCCGGGTCGGATAGCCAGAAGGATGCGGTGGCGGGCAGAGGAAA
AGAAGCGGAGACGGCGTCGGATGAAGAGGTGGAGGAGTTCTTCTCCATTCTGAAGCGATTACACGCGGCGTCGAAACACATAGAGAAGATCGACGGTGCGAGCCGTTTAT
TGATGGGAAAGAGATCGAAGCTGATGAAGTCGAGCGAGGAAGAAGCCGACGAAGTTGAAATTAGAGCAGAGAGAATTCCATCGCACAAATTGGACAGAAATTTGGATCTG
GATCTTAACTTAGAACCTGTATGCGTCGAATTGGATGGTAAAACAAGCCGGAGTCTGAATCCGAAGCCGGCGCTCGAATCCGAAGCCGGAGTGCGTAGATTCGGCCGCCG
ATTCTTGCTGGATATTGAAGTTTCCGACACAGATGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGCCGTTTGAGTTGTTTCCGGCGACTCGGAGTACGGAGAAAGGGAAAAGAAAGCAGGGATACGACGCCGGGTCGGATAGCCAGAAGGATGCGGTGGCGGGCAGAGGAAA
AGAAGCGGAGACGGCGTCGGATGAAGAGGTGGAGGAGTTCTTCTCCATTCTGAAGCGATTACACGCGGCGTCGAAACACATAGAGAAGATCGACGGTGCGAGCCGTTTAT
TGATGGGAAAGAGATCGAAGCTGATGAAGTCGAGCGAGGAAGAAGCCGACGAAGTTGAAATTAGAGCAGAGAGAATTCCATCGCACAAATTGGACAGAAATTTGGATCTG
GATCTTAACTTAGAACCTGTATGCGTCGAATTGGATGGTAAAACAAGCCGGAGTCTGAATCCGAAGCCGGCGCTCGAATCCGAAGCCGGAGTGCGTAGATTCGGCCGCCG
ATTCTTGCTGGATATTGAAGTTTCCGACACAGATGAATGA
Protein sequenceShow/hide protein sequence
MPFELFPATRSTEKGKRKQGYDAGSDSQKDAVAGRGKEAETASDEEVEEFFSILKRLHAASKHIEKIDGASRLLMGKRSKLMKSSEEEADEVEIRAERIPSHKLDRNLDL
DLNLEPVCVELDGKTSRSLNPKPALESEAGVRRFGRRFLLDIEVSDTDE