; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

ClCG05G023640 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG05G023640
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionRibosome maturation factor RimP
Genome locationCG_Chr05:35432356..35437337
RNA-Seq ExpressionClCG05G023640
SyntenyClCG05G023640
Gene Ontology termsGO:0042274 - ribosomal small subunit biogenesis (biological process)
InterPro domainsIPR003728 - Ribosome maturation factor RimP


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6574039.1 Serine/threonine-protein kinase dst1, partial [Cucurbita argyrosperma subsp. sororia]6.5e-13271.31Show/hide
Query:  ELPSINRRGKTMRGNRIAHTLLHRARIASVSSSLSSVGAPSSIVCGSEATSLSASVGAPSSIVCGSEATSLSACSSSS-----RRDYAFAFSPAATLRLF
        +LPSINRRGKTM G+RIA TLLHRAR  +  SS SS G PSSIV G++A S                  S S+CSSSS     RR++AFAFSP+ T+RLF
Subjt:  ELPSINRRGKTMRGNRIAHTLLHRARIASVSSSLSSVGAPSSIVCGSEATSLSASVGAPSSIVCGSEATSLSACSSSS-----RRDYAFAFSPAATLRLF

Query:  NTNSSKDFQDEVKEHNPPQCTDAFSYSYAIRQFSYFDASIEITVYGRDERGETTDGWEEDNDLEPELGDGGGGGGVVLQGVPWGEHVLFLAQEVLRQFGD
        NTN SK+F+DEVKEHNP Q                         YGRDE  ETTDGWEED+DLEPELGDGGGGGGVVLQGVPWGE VL LA EVL QFGD
Subjt:  NTNSSKDFQDEVKEHNPPQCTDAFSYSYAIRQFSYFDASIEITVYGRDERGETTDGWEEDNDLEPELGDGGGGGGVVLQGVPWGEHVLFLAQEVLRQFGD

Query:  DIKLYSFKTTPRGYIYVRLDKLSNEFGCPGLEELESYSQEYKKRLDETGALGNIPDDLAFEVSSPGAERLLKVPDDLFRFKAMPMRVSYIEDVDLRGTEN
        DI LYSFKTT RGYIYVRLDKLSNE+GCP LEELESYSQEYKKRLDETGALGNIPDDLA EVSSPGAERLLKVPDDLFRFKAMPMRV YIED + RGTEN
Subjt:  DIKLYSFKTTPRGYIYVRLDKLSNEFGCPGLEELESYSQEYKKRLDETGALGNIPDDLAFEVSSPGAERLLKVPDDLFRFKAMPMRVSYIEDVDLRGTEN

Query:  DGVFMLDHVELESKSCIWKLANVRENRDPLSKGRPLTRKQKEWRLKLPYANHKKVFLYI
        DGVFM+DHV+LES+SC+WKLANV+ENRDPLSKGRPLTRKQK+WRLKLP+ NHKK   Y+
Subjt:  DGVFMLDHVELESKSCIWKLANVRENRDPLSKGRPLTRKQKEWRLKLPYANHKKVFLYI

KAG7013097.1 rimP, partial [Cucurbita argyrosperma subsp. argyrosperma]5.2e-12971.63Show/hide
Query:  MRGNRIAHTLLHRARIASVSSSLSSVGAPSSIVCGSEATSLSASVGAPSSIVCGSEATSLSACSSSS-----RRDYAFAFSPAATLRLFNTNSSKDFQDE
        M G+RIA TLLHRAR  +  SS SS G PSSIV G++A S                  S S+CSSSS     RR++AFAFSP+ T+RLFNTN SK+F+DE
Subjt:  MRGNRIAHTLLHRARIASVSSSLSSVGAPSSIVCGSEATSLSASVGAPSSIVCGSEATSLSACSSSS-----RRDYAFAFSPAATLRLFNTNSSKDFQDE

Query:  VKEHNPPQCTDAFSYSYAIRQFSYFDASIEITVYGRDERGETTDGWEEDNDLEPELGDGGGGGGVVLQGVPWGEHVLFLAQEVLRQFGDDIKLYSFKTTP
        VKEHNP Q                         YGRDE  ETTDGWEED+DLEPELGDGGGGGGVVLQGVPWGE VL LA EVL QFGDDI LYSFKTT 
Subjt:  VKEHNPPQCTDAFSYSYAIRQFSYFDASIEITVYGRDERGETTDGWEEDNDLEPELGDGGGGGGVVLQGVPWGEHVLFLAQEVLRQFGDDIKLYSFKTTP

Query:  RGYIYVRLDKLSNEFGCPGLEELESYSQEYKKRLDETGALGNIPDDLAFEVSSPGAERLLKVPDDLFRFKAMPMRVSYIEDVDLRGTENDGVFMLDHVEL
        RGYIYVRLDKLSNE+GCP LEELESYSQEYKKRLDETGALGNIPDDLA EVSSPGAERLLKVPDDLFRFKAMPMRV YIED + RGTENDGVFM+DHV+L
Subjt:  RGYIYVRLDKLSNEFGCPGLEELESYSQEYKKRLDETGALGNIPDDLAFEVSSPGAERLLKVPDDLFRFKAMPMRVSYIEDVDLRGTENDGVFMLDHVEL

Query:  ESKSCIWKLANVRENRDPLSKGRPLTRKQKEWRLKLPYANHKKVFLYIE
        ES+SC+WKLANV+ENRDPLSKGRPLTRKQK+WRLKLP+ NHKKVFLY+E
Subjt:  ESKSCIWKLANVRENRDPLSKGRPLTRKQKEWRLKLPYANHKKVFLYIE

XP_008446453.1 PREDICTED: uncharacterized protein LOC103489189 isoform X3 [Cucumis melo]1.3e-13273.7Show/hide
Query:  MRGNRIAHTLLHRARIASVSSSLSSVGAPSSIVCGSEATSLSASVGAPSSIVCGSEATSLSACSSSSRRDYAFAFSPAATLRLFNTNSSKDFQDEVKEHN
        MRGN+IA TLL R+RI +VSS LSS+GAPSS V  SEAT                     + CSS S RD+AF FSPA TLRLF+T+SSKDF+DEVKE N
Subjt:  MRGNRIAHTLLHRARIASVSSSLSSVGAPSSIVCGSEATSLSASVGAPSSIVCGSEATSLSACSSSSRRDYAFAFSPAATLRLFNTNSSKDFQDEVKEHN

Query:  PPQCTDAFSYSYAIRQFSYFDASIEITVYGRDERGETTDGWEE-DNDLEPELGDGGGGGGVVLQGVPWGEHVLFLAQEVLRQFGDDIKLYSFKTTPRGYI
        P Q                         YGR++ GETTDGWEE D+DLEPELGDGG GGGVVLQGVPWGEHVL LAQEVL QFGDDIKLYSFK TPRGYI
Subjt:  PPQCTDAFSYSYAIRQFSYFDASIEITVYGRDERGETTDGWEE-DNDLEPELGDGGGGGGVVLQGVPWGEHVLFLAQEVLRQFGDDIKLYSFKTTPRGYI

Query:  YVRLDKLSNEFGCPGLEELESYSQEYKKRLDETGALGNIPDDLAFEVSSPGAERLLKVPDDLFRFKAMPMRVSYIEDVDLRGTENDGVFMLDHVELESKS
        YVRLDKLS++FGCP +EEL+SYS+EYKKRLDETGALGNIPDDLA EVSSPGAERLLKVPDDL RFKA PMRVSYIEDVD RG+ENDGVFMLDHVELES+S
Subjt:  YVRLDKLSNEFGCPGLEELESYSQEYKKRLDETGALGNIPDDLAFEVSSPGAERLLKVPDDLFRFKAMPMRVSYIEDVDLRGTENDGVFMLDHVELESKS

Query:  CIWKLANVRENRDPLSKGRPLTRKQKEWRLKLPYANHKKVFLYIEC
        CIWKLANVRENRDPLSKGRPLTRKQKEWRLKLPYANHKKVFLY+EC
Subjt:  CIWKLANVRENRDPLSKGRPLTRKQKEWRLKLPYANHKKVFLYIEC

XP_011655714.1 uncharacterized protein LOC101211568 [Cucumis sativus]5.2e-12972.62Show/hide
Query:  TMRGNRIAHTLLHRARIASVSSSLSSVGAPSSIVCGSEATSLSASVGAPSSIVCGSEATSLSACSSSSRRDYAFAFSPAATLRLFNTNSSKDFQDEVKEH
        TM  N+IAHTLL R+ IA+VSS LSS+GAPSS V  SE T                   S + CSS S R +AF FS    LRLFNTNSSK F+DEVKE 
Subjt:  TMRGNRIAHTLLHRARIASVSSSLSSVGAPSSIVCGSEATSLSASVGAPSSIVCGSEATSLSACSSSSRRDYAFAFSPAATLRLFNTNSSKDFQDEVKEH

Query:  NPPQCTDAFSYSYAIRQFSYFDASIEITVYGRDERGETTDGWEE-DNDLEPELGDGGGGGGVVLQGVPWGEHVLFLAQEVLRQFGDDIKLYSFKTTPRGY
        NPPQ                         YGR++ GETTDGWEE D+DLEPELGDGG GGGVVLQGVPWGEHVL LAQEVL QFGDDIKLYSFK TPRGY
Subjt:  NPPQCTDAFSYSYAIRQFSYFDASIEITVYGRDERGETTDGWEE-DNDLEPELGDGGGGGGVVLQGVPWGEHVLFLAQEVLRQFGDDIKLYSFKTTPRGY

Query:  IYVRLDKLSNEFGCPGLEELESYSQEYKKRLDETGALGNIPDDLAFEVSSPGAERLLKVPDDLFRFKAMPMRVSYIEDVDLRGTENDGVFMLDHVELESK
        IYVRLDKLS+EFGCP LEEL+SYS+EYKKRLDETGALGNIPDDLA EVSSPGAERLLK+PDDL RFKA PMRVSYIEDVD RG+ENDGVFMLDH+ELES+
Subjt:  IYVRLDKLSNEFGCPGLEELESYSQEYKKRLDETGALGNIPDDLAFEVSSPGAERLLKVPDDLFRFKAMPMRVSYIEDVDLRGTENDGVFMLDHVELESK

Query:  SCIWKLANVRENRDPLSKGRPLTRKQKEWRLKLPYANHKKVFLYIEC
        SCIWKLANVRENRDPLSKGRPLTRKQKEWRLKLPYANHKKVFLY++C
Subjt:  SCIWKLANVRENRDPLSKGRPLTRKQKEWRLKLPYANHKKVFLYIEC

XP_038891543.1 uncharacterized protein LOC120080930 [Benincasa hispida]2.8e-14379.42Show/hide
Query:  MRGNRIAHTLLHRARIASVSSSLSSVGAPSSIVCGSEATSLSASVGAPSSIVCGSEATSLSACSSSSRRDYAFAFSPAATLRLFNTNSSKDFQDEVKEHN
        MRGN IAHTLLHRARIA+VSSSLSS+GAPSSIV  SEATS                  S SACSSSSRRD+AFAF PAATLRLFNTNSSKDFQDE KEHN
Subjt:  MRGNRIAHTLLHRARIASVSSSLSSVGAPSSIVCGSEATSLSASVGAPSSIVCGSEATSLSACSSSSRRDYAFAFSPAATLRLFNTNSSKDFQDEVKEHN

Query:  PPQCTDAFSYSYAIRQFSYFDASIEITVYGRDERGETTDGWEEDNDLEPELGDGGGGGGVVLQGVPWGEHVLFLAQEVLRQFGDDIKLYSFKTTPRGYIY
        P Q                         YG DE GETTDGWEED+DLEPELGDGGGGGGVVLQGVPWGE VL LAQEVL QFGDDIKLYSFKTTPRGYIY
Subjt:  PPQCTDAFSYSYAIRQFSYFDASIEITVYGRDERGETTDGWEEDNDLEPELGDGGGGGGVVLQGVPWGEHVLFLAQEVLRQFGDDIKLYSFKTTPRGYIY

Query:  VRLDKLSNEFGCPGLEELESYSQEYKKRLDETGALGNIPDDLAFEVSSPGAERLLKVPDDLFRFKAMPMRVSYIEDVDLRGTENDGVFMLDHVELESKSC
        VRLDKLSNEFGCP LEELESYSQEYKKRLDETGALGNIPDDLA EVSSPGAERLLKVPDDLFRFKA+PMRVSYIE+VD RGTENDGV+MLD VE E + C
Subjt:  VRLDKLSNEFGCPGLEELESYSQEYKKRLDETGALGNIPDDLAFEVSSPGAERLLKVPDDLFRFKAMPMRVSYIEDVDLRGTENDGVFMLDHVELESKSC

Query:  IWKLANVRENRDPLSKGRPLTRKQKEWRLKLPYANHKKVFLYIEC
        IWKLANVRENRDPLSKGRPLTRKQKEWRLKLPYANHKKVFLY+EC
Subjt:  IWKLANVRENRDPLSKGRPLTRKQKEWRLKLPYANHKKVFLYIEC

TrEMBL top hitse value%identityAlignment
A0A0A0KW71 Uncharacterized protein2.5e-12972.62Show/hide
Query:  TMRGNRIAHTLLHRARIASVSSSLSSVGAPSSIVCGSEATSLSASVGAPSSIVCGSEATSLSACSSSSRRDYAFAFSPAATLRLFNTNSSKDFQDEVKEH
        TM  N+IAHTLL R+ IA+VSS LSS+GAPSS V  SE T                   S + CSS S R +AF FS    LRLFNTNSSK F+DEVKE 
Subjt:  TMRGNRIAHTLLHRARIASVSSSLSSVGAPSSIVCGSEATSLSASVGAPSSIVCGSEATSLSACSSSSRRDYAFAFSPAATLRLFNTNSSKDFQDEVKEH

Query:  NPPQCTDAFSYSYAIRQFSYFDASIEITVYGRDERGETTDGWEE-DNDLEPELGDGGGGGGVVLQGVPWGEHVLFLAQEVLRQFGDDIKLYSFKTTPRGY
        NPPQ                         YGR++ GETTDGWEE D+DLEPELGDGG GGGVVLQGVPWGEHVL LAQEVL QFGDDIKLYSFK TPRGY
Subjt:  NPPQCTDAFSYSYAIRQFSYFDASIEITVYGRDERGETTDGWEE-DNDLEPELGDGGGGGGVVLQGVPWGEHVLFLAQEVLRQFGDDIKLYSFKTTPRGY

Query:  IYVRLDKLSNEFGCPGLEELESYSQEYKKRLDETGALGNIPDDLAFEVSSPGAERLLKVPDDLFRFKAMPMRVSYIEDVDLRGTENDGVFMLDHVELESK
        IYVRLDKLS+EFGCP LEEL+SYS+EYKKRLDETGALGNIPDDLA EVSSPGAERLLK+PDDL RFKA PMRVSYIEDVD RG+ENDGVFMLDH+ELES+
Subjt:  IYVRLDKLSNEFGCPGLEELESYSQEYKKRLDETGALGNIPDDLAFEVSSPGAERLLKVPDDLFRFKAMPMRVSYIEDVDLRGTENDGVFMLDHVELESK

Query:  SCIWKLANVRENRDPLSKGRPLTRKQKEWRLKLPYANHKKVFLYIEC
        SCIWKLANVRENRDPLSKGRPLTRKQKEWRLKLPYANHKKVFLY++C
Subjt:  SCIWKLANVRENRDPLSKGRPLTRKQKEWRLKLPYANHKKVFLYIEC

A0A1S3BEL4 uncharacterized protein LOC103489189 isoform X11.6e-12873.45Show/hide
Query:  MRGNRIAHTLLHRARIASVSSSLSSVGAPSSIVCGSEATSLSASVGAPSSIVCGSEATSLSACSSSSRRDYAFAFSPAATLRLFNTNSSKDFQDEVKEHN
        MRGN+IA TLL R+RI +VSS LSS+GAPSS V  SEAT                     + CSS S RD+AF FSPA TLRLF+T+SSKDF+DEVKE N
Subjt:  MRGNRIAHTLLHRARIASVSSSLSSVGAPSSIVCGSEATSLSASVGAPSSIVCGSEATSLSACSSSSRRDYAFAFSPAATLRLFNTNSSKDFQDEVKEHN

Query:  PPQCTDAFSYSYAIRQFSYFDASIEITVYGRDERGETTDGWEE-DNDLEPELGDGGGGGGVVLQGVPWGEHVLFLAQEVLRQFGDDIKLYSFKTTPRGYI
        P Q                         YGR++ GETTDGWEE D+DLEPELGDGG GGGVVLQGVPWGEHVL LAQEVL QFGDDIKLYSFK TPRGYI
Subjt:  PPQCTDAFSYSYAIRQFSYFDASIEITVYGRDERGETTDGWEE-DNDLEPELGDGGGGGGVVLQGVPWGEHVLFLAQEVLRQFGDDIKLYSFKTTPRGYI

Query:  YVRLDKLSNEFGCPGLEELESYSQEYKKRLDETGALGNIPDDLAFEVSSPGAERLLKVPDDLFRFKAMPMRVSYIEDVDLRGTENDGVFMLDHVELESKS
        YVRLDKLS++FGCP +EEL+SYS+EYKKRLDETGALGNIPDDLA EVSSPGAERLLKVPDDL RFKA PMRVSYIEDVD RG+ENDGVFMLDHVELES+S
Subjt:  YVRLDKLSNEFGCPGLEELESYSQEYKKRLDETGALGNIPDDLAFEVSSPGAERLLKVPDDLFRFKAMPMRVSYIEDVDLRGTENDGVFMLDHVELESKS

Query:  CIWKLANVRENRDPLSKGRPLTRKQKEWRLKLPYANHKK
        CIWKLANVRENRDPLSKGRPLTRKQKEWRLKLPYANHKK
Subjt:  CIWKLANVRENRDPLSKGRPLTRKQKEWRLKLPYANHKK

A0A1S3BF35 uncharacterized protein LOC103489189 isoform X21.6e-12873.45Show/hide
Query:  MRGNRIAHTLLHRARIASVSSSLSSVGAPSSIVCGSEATSLSASVGAPSSIVCGSEATSLSACSSSSRRDYAFAFSPAATLRLFNTNSSKDFQDEVKEHN
        MRGN+IA TLL R+RI +VSS LSS+GAPSS V  SEAT                     + CSS S RD+AF FSPA TLRLF+T+SSKDF+DEVKE N
Subjt:  MRGNRIAHTLLHRARIASVSSSLSSVGAPSSIVCGSEATSLSASVGAPSSIVCGSEATSLSACSSSSRRDYAFAFSPAATLRLFNTNSSKDFQDEVKEHN

Query:  PPQCTDAFSYSYAIRQFSYFDASIEITVYGRDERGETTDGWEE-DNDLEPELGDGGGGGGVVLQGVPWGEHVLFLAQEVLRQFGDDIKLYSFKTTPRGYI
        P Q                         YGR++ GETTDGWEE D+DLEPELGDGG GGGVVLQGVPWGEHVL LAQEVL QFGDDIKLYSFK TPRGYI
Subjt:  PPQCTDAFSYSYAIRQFSYFDASIEITVYGRDERGETTDGWEE-DNDLEPELGDGGGGGGVVLQGVPWGEHVLFLAQEVLRQFGDDIKLYSFKTTPRGYI

Query:  YVRLDKLSNEFGCPGLEELESYSQEYKKRLDETGALGNIPDDLAFEVSSPGAERLLKVPDDLFRFKAMPMRVSYIEDVDLRGTENDGVFMLDHVELESKS
        YVRLDKLS++FGCP +EEL+SYS+EYKKRLDETGALGNIPDDLA EVSSPGAERLLKVPDDL RFKA PMRVSYIEDVD RG+ENDGVFMLDHVELES+S
Subjt:  YVRLDKLSNEFGCPGLEELESYSQEYKKRLDETGALGNIPDDLAFEVSSPGAERLLKVPDDLFRFKAMPMRVSYIEDVDLRGTENDGVFMLDHVELESKS

Query:  CIWKLANVRENRDPLSKGRPLTRKQKEWRLKLPYANHKK
        CIWKLANVRENRDPLSKGRPLTRKQKEWRLKLPYANHKK
Subjt:  CIWKLANVRENRDPLSKGRPLTRKQKEWRLKLPYANHKK

A0A1S3BF38 uncharacterized protein LOC103489189 isoform X36.4e-13373.7Show/hide
Query:  MRGNRIAHTLLHRARIASVSSSLSSVGAPSSIVCGSEATSLSASVGAPSSIVCGSEATSLSACSSSSRRDYAFAFSPAATLRLFNTNSSKDFQDEVKEHN
        MRGN+IA TLL R+RI +VSS LSS+GAPSS V  SEAT                     + CSS S RD+AF FSPA TLRLF+T+SSKDF+DEVKE N
Subjt:  MRGNRIAHTLLHRARIASVSSSLSSVGAPSSIVCGSEATSLSASVGAPSSIVCGSEATSLSACSSSSRRDYAFAFSPAATLRLFNTNSSKDFQDEVKEHN

Query:  PPQCTDAFSYSYAIRQFSYFDASIEITVYGRDERGETTDGWEE-DNDLEPELGDGGGGGGVVLQGVPWGEHVLFLAQEVLRQFGDDIKLYSFKTTPRGYI
        P Q                         YGR++ GETTDGWEE D+DLEPELGDGG GGGVVLQGVPWGEHVL LAQEVL QFGDDIKLYSFK TPRGYI
Subjt:  PPQCTDAFSYSYAIRQFSYFDASIEITVYGRDERGETTDGWEE-DNDLEPELGDGGGGGGVVLQGVPWGEHVLFLAQEVLRQFGDDIKLYSFKTTPRGYI

Query:  YVRLDKLSNEFGCPGLEELESYSQEYKKRLDETGALGNIPDDLAFEVSSPGAERLLKVPDDLFRFKAMPMRVSYIEDVDLRGTENDGVFMLDHVELESKS
        YVRLDKLS++FGCP +EEL+SYS+EYKKRLDETGALGNIPDDLA EVSSPGAERLLKVPDDL RFKA PMRVSYIEDVD RG+ENDGVFMLDHVELES+S
Subjt:  YVRLDKLSNEFGCPGLEELESYSQEYKKRLDETGALGNIPDDLAFEVSSPGAERLLKVPDDLFRFKAMPMRVSYIEDVDLRGTENDGVFMLDHVELESKS

Query:  CIWKLANVRENRDPLSKGRPLTRKQKEWRLKLPYANHKKVFLYIEC
        CIWKLANVRENRDPLSKGRPLTRKQKEWRLKLPYANHKKVFLY+EC
Subjt:  CIWKLANVRENRDPLSKGRPLTRKQKEWRLKLPYANHKKVFLYIEC

A0A6J1FZQ6 uncharacterized protein LOC1114493655.6e-12971.35Show/hide
Query:  MRGNRIAHTLLHRARIASVSSSLSSVGAPSSIVCGSEATSLSASVGAPSSIVCGSEATSLSACSSSS-----RRDYAFAFSPAATLRLFNTNSSKDFQDE
        M G+RIA TLLHRAR  +  SS SS G PSSIV G++A S                  S S+CSSSS     RR++AFAFSP+ T+RLFNTN SK+F+DE
Subjt:  MRGNRIAHTLLHRARIASVSSSLSSVGAPSSIVCGSEATSLSASVGAPSSIVCGSEATSLSACSSSS-----RRDYAFAFSPAATLRLFNTNSSKDFQDE

Query:  VKEHNPPQCTDAFSYSYAIRQFSYFDASIEITVYGRDERGETTDGWEEDNDLEPELGDGGGGGGVVLQGVPWGEHVLFLAQEVLRQFGDDIKLYSFKTTP
        VKEHNP Q                         YGRDE  ETTDGWEED+DLEPELGDGGGGGGVVLQGVPWGE VL LA EVL QFGDDI LYSFKTT 
Subjt:  VKEHNPPQCTDAFSYSYAIRQFSYFDASIEITVYGRDERGETTDGWEEDNDLEPELGDGGGGGGVVLQGVPWGEHVLFLAQEVLRQFGDDIKLYSFKTTP

Query:  RGYIYVRLDKLSNEFGCPGLEELESYSQEYKKRLDETGALGNIPDDLAFEVSSPGAERLLKVPDDLFRFKAMPMRVSYIEDVDLRGTENDGVFMLDHVEL
        RGYIYVRLDKLSNE+GCP LEELESYSQEYKKRLDETGALGNIPDDLA EVSSPGAERLLKVPDDLFRFKAMPMRV YIED + RGTENDGVFM+DHV+L
Subjt:  RGYIYVRLDKLSNEFGCPGLEELESYSQEYKKRLDETGALGNIPDDLAFEVSSPGAERLLKVPDDLFRFKAMPMRVSYIEDVDLRGTENDGVFMLDHVEL

Query:  ESKSCIWKLANVRENRDPLSKGRPLTRKQKEWRLKLPYANHKKVFLYIE
        ES+SC+WKLANV+ENRDPLSKGRPLTRKQK+WRLK+P+ NHKKVFLY+E
Subjt:  ESKSCIWKLANVRENRDPLSKGRPLTRKQKEWRLKLPYANHKKVFLYIE

SwissProt top hitse value%identityAlignment
B0SH16 Ribosome maturation factor RimP1.8e-0732.99Show/hide
Query:  VLRQFGDDIKLYSFKTTPR---GYIYVRLDKLSNEFGCPGLEELESYSQEYKKRLDETGALGNIPDDLAFEVSSPGAERLLKVPDDLFRFKAMPMRV
        +LR     + L+S +   R     I + LD L+++ G   LE+ E+ S+  K+ LD+ G       D   +VSS GAER+L++P+DL RF+ + +++
Subjt:  VLRQFGDDIKLYSFKTTPR---GYIYVRLDKLSNEFGCPGLEELESYSQEYKKRLDETGALGNIPDDLAFEVSSPGAERLLKVPDDLFRFKAMPMRV

B0SQH2 Ribosome maturation factor RimP1.8e-0732.99Show/hide
Query:  VLRQFGDDIKLYSFKTTPR---GYIYVRLDKLSNEFGCPGLEELESYSQEYKKRLDETGALGNIPDDLAFEVSSPGAERLLKVPDDLFRFKAMPMRV
        +LR     + L+S +   R     I + LD L+++ G   LE+ E+ S+  K+ LD+ G       D   +VSS GAER+L++P+DL RF+ + +++
Subjt:  VLRQFGDDIKLYSFKTTPR---GYIYVRLDKLSNEFGCPGLEELESYSQEYKKRLDETGALGNIPDDLAFEVSSPGAERLLKVPDDLFRFKAMPMRV

Q04U33 Ribosome maturation factor RimP2.3e-0738.04Show/hide
Query:  IKLYSFKTTPR---GYIYVRLDKLSNEFGCPGLEELESYSQEYKKRLDETGALGNIPD-DLAFEVSSPGAERLLKVPDDLFRFKAMPMRVSY
        +KLYS K   R     I V LD L + +G   L E E  S++ K+ L+        PD D   +VSS GAER L +P+D+ RF+ +P+R+ +
Subjt:  IKLYSFKTTPR---GYIYVRLDKLSNEFGCPGLEELESYSQEYKKRLDETGALGNIPD-DLAFEVSSPGAERLLKVPDDLFRFKAMPMRVSY

Q72NX1 Ribosome maturation factor RimP8.0e-0836.45Show/hide
Query:  IKLYSFKTTPR---GYIYVRLDKLSNEFGCPGLEELESYSQEYKKRLDETGALGNIPD-DLAFEVSSPGAERLLKVPDDLFRFKAMPMRVSYIEDVDLRG
        +KLYS K   R     I V LD L + +G   L E E  S++ K+ L+        PD D   +VSS GAER L +P DL RF+ +P+R+ +  +   + 
Subjt:  IKLYSFKTTPR---GYIYVRLDKLSNEFGCPGLEELESYSQEYKKRLDETGALGNIPD-DLAFEVSSPGAERLLKVPDDLFRFKAMPMRVSYIEDVDLRG

Query:  TENDGVF
         E +G+F
Subjt:  TENDGVF

Q8F7K3 Ribosome maturation factor RimP8.0e-0836.45Show/hide
Query:  IKLYSFKTTPR---GYIYVRLDKLSNEFGCPGLEELESYSQEYKKRLDETGALGNIPD-DLAFEVSSPGAERLLKVPDDLFRFKAMPMRVSYIEDVDLRG
        +KLYS K   R     I V LD L + +G   L E E  S++ K+ L+        PD D   +VSS GAER L +P DL RF+ +P+R+ +  +   + 
Subjt:  IKLYSFKTTPR---GYIYVRLDKLSNEFGCPGLEELESYSQEYKKRLDETGALGNIPD-DLAFEVSSPGAERLLKVPDDLFRFKAMPMRVSYIEDVDLRG

Query:  TENDGVF
         E +G+F
Subjt:  TENDGVF

Arabidopsis top hitse value%identityAlignment
AT1G69210.1 Uncharacterised protein family UPF00901.3e-7461.61Show/hide
Query:  ETTDGWE--EDNDLEPELGDGGGGGGVVLQGVPWGEHVLFLAQEVLRQFGDDIKLYSFKTTPRGYIYVRLDKLSNEFGCPGLEELESYSQEYKKRLDETG
        E  + WE  ED D+E +LGDGG GGG+VL+GV WGE VL +A +VL+Q   D++L++FKT+PRGYIYVRLDKLS E+GCP ++ELE +S+E+KKRLD+ G
Subjt:  ETTDGWE--EDNDLEPELGDGGGGGGVVLQGVPWGEHVLFLAQEVLRQFGDDIKLYSFKTTPRGYIYVRLDKLSNEFGCPGLEELESYSQEYKKRLDETG

Query:  ALGNIPDDLAFEVSSPGAERLLKVPDDLFRFKAMPMRVSYIEDVDLRGTENDGVFMLDHVELESKSCIWKLANVRENRDPLSKGRPLTRKQKEWRLKLPY
        A   IP+DLA EVSSPGAERLL+VP+DL RFK MPM VSY+E+ + R     GVF+L+ ++ ES +C+WKLA+VRENRDP SKGRPL+RKQK+ R+ LP+
Subjt:  ALGNIPDDLAFEVSSPGAERLLKVPDDLFRFKAMPMRVSYIEDVDLRGTENDGVFMLDHVELESKSCIWKLANVRENRDPLSKGRPLTRKQKEWRLKLPY

Query:  ANHKKVFLYIE
        A+HKK+ LY++
Subjt:  ANHKKVFLYIE

AT1G69210.2 Uncharacterised protein family UPF00901.6e-3561.06Show/hide
Query:  ETTDGWE--EDNDLEPELGDGGGGGGVVLQGVPWGEHVLFLAQEVLRQFGDDIKLYSFKTTPRGYIYVRLDKLSNEFGCPGLEELESYSQEYKKRLDETG
        E  + WE  ED D+E +LGDGG GGG+VL+GV WGE VL +A +VL+Q   D++L++FKT+PRGYIYVRLDKLS E+GCP ++ELE +S+E+KKRLD+ G
Subjt:  ETTDGWE--EDNDLEPELGDGGGGGGVVLQGVPWGEHVLFLAQEVLRQFGDDIKLYSFKTTPRGYIYVRLDKLSNEFGCPGLEELESYSQEYKKRLDETG

Query:  ALGNIPDDLAFEV
        A   IP+DLA EV
Subjt:  ALGNIPDDLAFEV

AT1G77122.1 Uncharacterised protein family UPF00902.4e-4744.24Show/hide
Query:  DERGETTDGWEEDNDLEPEL--GDGGGGGGVVLQGVPWGEHVLFLAQEVLRQFGDDIKLYSFKTTPRGYIYVRLDKLSNEFGCPGLEELESYSQEYKKRL
        DE  E  D   E ++ E EL  GDGGGGGG+ L G  W +  L LA +V   F  D+ +Y+FKT P   I VR+++L+N+FG P +E++E++S  Y+ +L
Subjt:  DERGETTDGWEEDNDLEPEL--GDGGGGGGVVLQGVPWGEHVLFLAQEVLRQFGDDIKLYSFKTTPRGYIYVRLDKLSNEFGCPGLEELESYSQEYKKRL

Query:  DETGALGNIPDDLAFEVSSPGAERLLKVPDDLFRFKAMPMRVSYI-EDVDLRGTENDGVFMLDHVELESKSCIWKLANVRENRDPLSKGRPLTRKQKEWR
         E     +IPD+++ EVSSPG ER++++P DL R+K  PM V Y  ED +   TE DG+F L   ++E+K CIW +A++R NR+   KGRPL++KQ+EWR
Subjt:  DETGALGNIPDDLAFEVSSPGAERLLKVPDDLFRFKAMPMRVSYI-EDVDLRGTENDGVFMLDHVELESKSCIWKLANVRENRDPLSKGRPLTRKQKEWR

Query:  LKLPYANHKKVFLYIEC
        L+  + + + V L+ EC
Subjt:  LKLPYANHKKVFLYIEC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AACCGTCGACAACCCGCGAAATATCCATTCTGCGAGCTTCCATCGATCAACCGACGAGGCAAAACAATGCGTGGCAACAGGATTGCTCATACTTTGCTCCATCGAGCTCG
AATCGCCTCCGTTTCCTCTTCACTCTCCTCCGTCGGAGCACCGTCTTCCATAGTCTGTGGCTCCGAAGCAACGTCTCTAAGTGCTTCCGTCGGAGCACCGTCTTCCATAG
TCTGTGGCTCCGAAGCAACGTCTCTAAGTGCTTGCTCCTCTTCCTCCCGTCGCGACTACGCATTCGCCTTTTCCCCCGCTGCAACCCTGCGGTTATTCAATACCAACTCG
TCTAAAGACTTTCAAGATGAAGTGAAAGAACATAATCCACCCCAGTGTACGGATGCGTTTTCTTATTCTTATGCAATCCGTCAATTCTCTTATTTTGACGCTTCAATCGA
GATTACCGTTTATGGGAGGGATGAACGGGGAGAAACCACGGATGGATGGGAAGAAGACAATGATCTGGAACCTGAGCTTGGTGATGGAGGGGGTGGTGGCGGTGTTGTTT
TGCAAGGCGTACCATGGGGTGAGCATGTTCTTTTTCTTGCTCAAGAGGTCCTGCGGCAATTTGGTGATGACATAAAACTCTATTCTTTCAAGACCACTCCACGTGGATAC
ATTTACGTCAGATTAGACAAACTCTCAAACGAATTTGGTTGTCCCGGCTTGGAGGAGCTTGAAAGTTATAGCCAAGAGTACAAGAAAAGATTAGATGAAACTGGAGCACT
TGGAAATATTCCCGATGATTTAGCTTTTGAGGTATCATCTCCAGGTGCAGAGAGGTTACTGAAGGTCCCAGATGATCTGTTTAGATTCAAAGCCATGCCAATGCGAGTTT
CCTACATTGAAGACGTAGACTTGAGAGGCACTGAAAATGATGGAGTTTTTATGCTGGATCATGTAGAATTGGAATCTAAGAGCTGTATTTGGAAATTGGCAAATGTGAGG
GAAAACCGAGATCCTTTAAGTAAGGGTAGGCCTTTGACTCGTAAGCAGAAAGAATGGAGGTTAAAGTTACCCTATGCAAATCATAAGAAGGTATTCCTTTACATTGAATG
CTGA
mRNA sequenceShow/hide mRNA sequence
AACCGTCGACAACCCGCGAAATATCCATTCTGCGAGCTTCCATCGATCAACCGACGAGGCAAAACAATGCGTGGCAACAGGATTGCTCATACTTTGCTCCATCGAGCTCG
AATCGCCTCCGTTTCCTCTTCACTCTCCTCCGTCGGAGCACCGTCTTCCATAGTCTGTGGCTCCGAAGCAACGTCTCTAAGTGCTTCCGTCGGAGCACCGTCTTCCATAG
TCTGTGGCTCCGAAGCAACGTCTCTAAGTGCTTGCTCCTCTTCCTCCCGTCGCGACTACGCATTCGCCTTTTCCCCCGCTGCAACCCTGCGGTTATTCAATACCAACTCG
TCTAAAGACTTTCAAGATGAAGTGAAAGAACATAATCCACCCCAGTGTACGGATGCGTTTTCTTATTCTTATGCAATCCGTCAATTCTCTTATTTTGACGCTTCAATCGA
GATTACCGTTTATGGGAGGGATGAACGGGGAGAAACCACGGATGGATGGGAAGAAGACAATGATCTGGAACCTGAGCTTGGTGATGGAGGGGGTGGTGGCGGTGTTGTTT
TGCAAGGCGTACCATGGGGTGAGCATGTTCTTTTTCTTGCTCAAGAGGTCCTGCGGCAATTTGGTGATGACATAAAACTCTATTCTTTCAAGACCACTCCACGTGGATAC
ATTTACGTCAGATTAGACAAACTCTCAAACGAATTTGGTTGTCCCGGCTTGGAGGAGCTTGAAAGTTATAGCCAAGAGTACAAGAAAAGATTAGATGAAACTGGAGCACT
TGGAAATATTCCCGATGATTTAGCTTTTGAGGTATCATCTCCAGGTGCAGAGAGGTTACTGAAGGTCCCAGATGATCTGTTTAGATTCAAAGCCATGCCAATGCGAGTTT
CCTACATTGAAGACGTAGACTTGAGAGGCACTGAAAATGATGGAGTTTTTATGCTGGATCATGTAGAATTGGAATCTAAGAGCTGTATTTGGAAATTGGCAAATGTGAGG
GAAAACCGAGATCCTTTAAGTAAGGGTAGGCCTTTGACTCGTAAGCAGAAAGAATGGAGGTTAAAGTTACCCTATGCAAATCATAAGAAGGTATTCCTTTACATTGAATG
CTGAATGTCAGCACCTGAAGGTCCAAAAGAAAGCATGGGTGTCCTCATTTCATGAGGCACATTCAACAAAGGTAGAGCCAGGATACTTATTGTCAATCAAAAGGAGGTGT
CCATGTTGCCATGTTGGGCAGGCCCCCGGCTGTAGAGATAGATAGCTCATTATGGATAAGTGGACCACTGAATGGTTTTATTATTTCTTAGAAAGAAAATTCATATT
Protein sequenceShow/hide protein sequence
NRRQPAKYPFCELPSINRRGKTMRGNRIAHTLLHRARIASVSSSLSSVGAPSSIVCGSEATSLSASVGAPSSIVCGSEATSLSACSSSSRRDYAFAFSPAATLRLFNTNS
SKDFQDEVKEHNPPQCTDAFSYSYAIRQFSYFDASIEITVYGRDERGETTDGWEEDNDLEPELGDGGGGGGVVLQGVPWGEHVLFLAQEVLRQFGDDIKLYSFKTTPRGY
IYVRLDKLSNEFGCPGLEELESYSQEYKKRLDETGALGNIPDDLAFEVSSPGAERLLKVPDDLFRFKAMPMRVSYIEDVDLRGTENDGVFMLDHVELESKSCIWKLANVR
ENRDPLSKGRPLTRKQKEWRLKLPYANHKKVFLYIEC