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ClCG05G024200 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG05G024200
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionUnknown protein
Genome locationCG_Chr05:35843911..35850502
RNA-Seq ExpressionClCG05G024200
SyntenyClCG05G024200
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034426.1 putative lipoprotein yfhM [Cucumis melo var. makuwa]6.7e-1878.57Show/hide
Query:  AVIMIHLGQDFPASQGAHQKNQPLQKLLNGRMDLQYNDYPIFGSNPRHTPKPTGKV
        A  M+HLGQDFPASQ A+QKNQP + L NGRMDLQ+NDY IFG+NPRHTPKPTGKV
Subjt:  AVIMIHLGQDFPASQGAHQKNQPLQKLLNGRMDLQYNDYPIFGSNPRHTPKPTGKV

KAG6601439.1 hypothetical protein SDJN03_06672, partial [Cucurbita argyrosperma subsp. sororia]6.7e-1880.7Show/hide
Query:  GAVIMIHLGQDFPASQGAHQKNQPLQKLLNGRMDLQYNDYPIFGSNPRHTPKPTGKV
        GA IMIHLGQDF ASQ AHQK QPLQKLLN RMDLQYNDYP+  +N RHTPKPTG+V
Subjt:  GAVIMIHLGQDFPASQGAHQKNQPLQKLLNGRMDLQYNDYPIFGSNPRHTPKPTGKV

KAG7032221.1 hypothetical protein SDJN02_06264, partial [Cucurbita argyrosperma subsp. argyrosperma]3.3e-1778.95Show/hide
Query:  GAVIMIHLGQDFPASQGAHQKNQPLQKLLNGRMDLQYNDYPIFGSNPRHTPKPTGKV
        GA IMIHLGQDF ASQ AHQ  QPLQKLLN RMDLQYNDYP+  +N RHTPKPTG+V
Subjt:  GAVIMIHLGQDFPASQGAHQKNQPLQKLLNGRMDLQYNDYPIFGSNPRHTPKPTGKV

KGN51928.1 hypothetical protein Csa_009059 [Cucumis sativus]1.0e-1880.36Show/hide
Query:  AVIMIHLGQDFPASQGAHQKNQPLQKLLNGRMDLQYNDYPIFGSNPRHTPKPTGKV
        A +MIHLGQDFPASQ  +QKNQPL+ L NGRMDLQ+NDY IFG+NPRHTPKPTGKV
Subjt:  AVIMIHLGQDFPASQGAHQKNQPLQKLLNGRMDLQYNDYPIFGSNPRHTPKPTGKV

XP_008446367.1 PREDICTED: uncharacterized protein LOC103489129 [Cucumis melo]6.7e-1878.57Show/hide
Query:  AVIMIHLGQDFPASQGAHQKNQPLQKLLNGRMDLQYNDYPIFGSNPRHTPKPTGKV
        A  M+HLGQDFPASQ A+QKNQP + L NGRMDLQ+NDY IFG+NPRHTPKPTGKV
Subjt:  AVIMIHLGQDFPASQGAHQKNQPLQKLLNGRMDLQYNDYPIFGSNPRHTPKPTGKV

TrEMBL top hitse value%identityAlignment
A0A0A0KQN6 Uncharacterized protein5.0e-1980.36Show/hide
Query:  AVIMIHLGQDFPASQGAHQKNQPLQKLLNGRMDLQYNDYPIFGSNPRHTPKPTGKV
        A +MIHLGQDFPASQ  +QKNQPL+ L NGRMDLQ+NDY IFG+NPRHTPKPTGKV
Subjt:  AVIMIHLGQDFPASQGAHQKNQPLQKLLNGRMDLQYNDYPIFGSNPRHTPKPTGKV

A0A1S3BEE6 uncharacterized protein LOC1034891293.2e-1878.57Show/hide
Query:  AVIMIHLGQDFPASQGAHQKNQPLQKLLNGRMDLQYNDYPIFGSNPRHTPKPTGKV
        A  M+HLGQDFPASQ A+QKNQP + L NGRMDLQ+NDY IFG+NPRHTPKPTGKV
Subjt:  AVIMIHLGQDFPASQGAHQKNQPLQKLLNGRMDLQYNDYPIFGSNPRHTPKPTGKV

A0A5A7SX31 Putative lipoprotein yfhM3.2e-1878.57Show/hide
Query:  AVIMIHLGQDFPASQGAHQKNQPLQKLLNGRMDLQYNDYPIFGSNPRHTPKPTGKV
        A  M+HLGQDFPASQ A+QKNQP + L NGRMDLQ+NDY IFG+NPRHTPKPTGKV
Subjt:  AVIMIHLGQDFPASQGAHQKNQPLQKLLNGRMDLQYNDYPIFGSNPRHTPKPTGKV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGTCTCTCATTAATAACTGTCTCCTTCCACATCAGCACCGTCTCCAACAAGATCCCACCAACAAAAAGATCCACGAAAAGCTTGATCTAAACACATCCCAGCCGTC
CATCTACACTACAAAAAGGTTAGGGGACACGTGTCGGTCCCAGAAGGAGTATATCTTCCCTTTAAAAATATCTTGTTCTAGTGGCTGTCCTCCCGTCCAATTAGGAGGCA
TACCTTTATTTGGGGCAGTAATTATGATCCATCTTGGCCAGGATTTTCCAGCTTCCCAAGGTGCACACCAGAAGAATCAGCCACTGCAGAAATTGTTGAATGGCAGAATG
GATTTGCAGTACAATGATTATCCAATATTTGGATCTAATCCTCGCCACACTCCAAAGCCAACGGGAAAAGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTGTCTCTCATTAATAACTGTCTCCTTCCACATCAGCACCGTCTCCAACAAGATCCCACCAACAAAAAGATCCACGAAAAGCTTGATCTAAACACATCCCAGCCGTC
CATCTACACTACAAAAAGGTTAGGGGACACGTGTCGGTCCCAGAAGGAGTATATCTTCCCTTTAAAAATATCTTGTTCTAGTGGCTGTCCTCCCGTCCAATTAGGAGGCA
TACCTTTATTTGGGGCAGTAATTATGATCCATCTTGGCCAGGATTTTCCAGCTTCCCAAGGTGCACACCAGAAGAATCAGCCACTGCAGAAATTGTTGAATGGCAGAATG
GATTTGCAGTACAATGATTATCCAATATTTGGATCTAATCCTCGCCACACTCCAAAGCCAACGGGAAAAGTTTGA
Protein sequenceShow/hide protein sequence
MVSLINNCLLPHQHRLQQDPTNKKIHEKLDLNTSQPSIYTTKRLGDTCRSQKEYIFPLKISCSSGCPPVQLGGIPLFGAVIMIHLGQDFPASQGAHQKNQPLQKLLNGRM
DLQYNDYPIFGSNPRHTPKPTGKV