; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

ClCG05G026530 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG05G026530
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionRNA-binding protein 1-like
Genome locationCG_Chr05:37777483..37778739
RNA-Seq ExpressionClCG05G026530
SyntenyClCG05G026530
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8649895.1 hypothetical protein Csa_012205 [Cucumis sativus]7.9e-9776.11Show/hide
Query:  RMNMSTIRMENNNDQCRGRKIFVGGLSAELTEDEFKTYFEKFGQITDVVVMHDSVTNRPRGFGFITFDSVESVDSVLQNNFHELNGRRVEVKRAIPKKGN
        R+NMST RM+NNNDQCRGRKIFVGGLSAELTE+EF++YFE FGQITDVVVMHDSVTNRPRGFGF+TF+S+ESVDSVLQ NFHELNGRRVEVKRAIPKKGN
Subjt:  RMNMSTIRMENNNDQCRGRKIFVGGLSAELTEDEFKTYFEKFGQITDVVVMHDSVTNRPRGFGFITFDSVESVDSVLQNNFHELNGRRVEVKRAIPKKGN

Query:  YNAGHIPNARTLGGKSPL--PNRDVPFPYPYYGTGYTIYPGFTPFPHFGGPGVDLYGSNFYGNWFPPSFGNMASDGAWCSPNFFGVGMFPPPYRNFLISP
        YN  HIPNAR    KSPL   NR+VPFPYPYYG+GY IYPGFT FPH+G   VD YGSNFYGNWFPP   N+ASDG W  PNFF VGM PP  RN L+ P
Subjt:  YNAGHIPNARTLGGKSPL--PNRDVPFPYPYYGTGYTIYPGFTPFPHFGGPGVDLYGSNFYGNWFPPSFGNMASDGAWCSPNFFGVGMFPPPYRNFLISP

Query:  SFSSKGLSDTGTGNGMA-IRNGEIKQKTSGKRSMSADAVPFQIKDKT
           SKG+   G+ NGMA  RNGEIKQ T+GKR MSADA PFQIKD+T
Subjt:  SFSSKGLSDTGTGNGMA-IRNGEIKQKTSGKRSMSADAVPFQIKDKT

KAG7037746.1 RNA-binding protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma]1.4e-8066.53Show/hide
Query:  MATEQRMNMSTIRMENNNDQCRGRKIFVGGLSAELTEDEFKTYFEKFGQITDVVVMHDSVTNRPRGFGFITFDSVESVDSVLQNNFHELNGRRVEVKRAI
        +A EQRM+  T RME   DQ RGRKIFVGGLSAELTED+FK+YFEKFG++TDVVVM DSVT RPRGFGFITFDSV+SVDSVLQNNFHELNGRRVEVKRAI
Subjt:  MATEQRMNMSTIRMENNNDQCRGRKIFVGGLSAELTEDEFKTYFEKFGQITDVVVMHDSVTNRPRGFGFITFDSVESVDSVLQNNFHELNGRRVEVKRAI

Query:  PKKGNYNAGHIPNARTLGGKSPLPNRDVPFPYPYYGTGYTIYPGFTPFPHFGGPGVDLYGSNFYGNWFPPSFGNMASDGAWCSPNFFGVGMFPPPYRNFL
        PKKGNYN GHI        KSPL   +V   YPYY  GYT+YPGFTPFP + GPG  LYGS+ YGNWF PSFG MAS  AW +PNFF  GMFPPP+++ L
Subjt:  PKKGNYNAGHIPNARTLGGKSPLPNRDVPFPYPYYGTGYTIYPGFTPFPHFGGPGVDLYGSNFYGNWFPPSFGNMASDGAWCSPNFFGVGMFPPPYRNFL

Query:  ISPSFSSKGLSDTGTGNGMAIRNGEIKQKTSGKRSMSADAVPFQIKDK
        + P++SS GLS    G   A    ++   T  +++MSADAVPF  KDK
Subjt:  ISPSFSSKGLSDTGTGNGMAIRNGEIKQKTSGKRSMSADAVPFQIKDK

XP_004141412.1 RNA-binding protein 1 [Cucumis sativus]1.5e-9576.23Show/hide
Query:  MSTIRMENNNDQCRGRKIFVGGLSAELTEDEFKTYFEKFGQITDVVVMHDSVTNRPRGFGFITFDSVESVDSVLQNNFHELNGRRVEVKRAIPKKGNYNA
        MST RM+NNNDQCRGRKIFVGGLSAELTE+EF++YFE FGQITDVVVMHDSVTNRPRGFGF+TF+S+ESVDSVLQ NFHELNGRRVEVKRAIPKKGNYN 
Subjt:  MSTIRMENNNDQCRGRKIFVGGLSAELTEDEFKTYFEKFGQITDVVVMHDSVTNRPRGFGFITFDSVESVDSVLQNNFHELNGRRVEVKRAIPKKGNYNA

Query:  GHIPNARTLGGKSPL--PNRDVPFPYPYYGTGYTIYPGFTPFPHFGGPGVDLYGSNFYGNWFPPSFGNMASDGAWCSPNFFGVGMFPPPYRNFLISPSFS
         HIPNAR    KSPL   NR+VPFPYPYYG+GY IYPGFT FPH+G   VD YGSNFYGNWFPP   N+ASDG W  PNFF VGM PP  RN L+ P   
Subjt:  GHIPNARTLGGKSPL--PNRDVPFPYPYYGTGYTIYPGFTPFPHFGGPGVDLYGSNFYGNWFPPSFGNMASDGAWCSPNFFGVGMFPPPYRNFLISPSFS

Query:  SKGLSDTGTGNGMA-IRNGEIKQKTSGKRSMSADAVPFQIKDKT
        SKG+   G+ NGMA  RNGEIKQ T+GKR MSADA PFQIKD+T
Subjt:  SKGLSDTGTGNGMA-IRNGEIKQKTSGKRSMSADAVPFQIKDKT

XP_022940975.1 RNA-binding protein 1-like [Cucurbita moschata]2.6e-7968.26Show/hide
Query:  DQCRGRKIFVGGLSAELTEDEFKTYFEKFGQITDVVVMHDSVTNRPRGFGFITFDSVESVDSVLQNNFHELNGRRVEVKRAIPKKGNYNAGHIPNARTLG
        DQ RGRKIFVGGLSAELTED+FK YFEKFG++TDVVVM DSVT RPRGFGFITFDSV+SVDSVLQNNFHELNGRRVEVKRAIPKKGNYN GHI       
Subjt:  DQCRGRKIFVGGLSAELTEDEFKTYFEKFGQITDVVVMHDSVTNRPRGFGFITFDSVESVDSVLQNNFHELNGRRVEVKRAIPKKGNYNAGHIPNARTLG

Query:  GKSPLPNRDVPFPYPYYGTGYTIYPGFTPFPHFGGPGVDLYGSNFYGNWFPPSFGNMASDGAWCSPNFFGVGMFPPPYRNFLISPSFSSKGLSDTGTGNG
         KSPL   +V   YPYY  GYT+YPGFTPFP + GPG  LYGS+ YGNWF PSFG MAS  AW +PNFF  GMFPPP++N L+ P++SS GLS    G  
Subjt:  GKSPLPNRDVPFPYPYYGTGYTIYPGFTPFPHFGGPGVDLYGSNFYGNWFPPSFGNMASDGAWCSPNFFGVGMFPPPYRNFLISPSFSSKGLSDTGTGNG

Query:  MAIRNGEIKQKTSGKRSMSADAVPFQIKDK
         A    ++   T  +++MSADAVPF  KDK
Subjt:  MAIRNGEIKQKTSGKRSMSADAVPFQIKDK

XP_038898856.1 RNA-binding protein 1-like [Benincasa hispida]4.3e-11985.83Show/hide
Query:  MNMSTIRMENNNDQCRGRKIFVGGLSAELTEDEFKTYFEKFGQITDVVVMHDSVTNRPRGFGFITFDSVESVDSVLQNNFHELNGRRVEVKRAIPKKGNY
        M MST RMENNNDQCRGRKIFVGGLSAELTEDEFK YFEKFG+ITDVVVMHDSVTNRPRGFGFITF+SVESVDSVLQ+NFHELNGRRVEVKRAIPKKGNY
Subjt:  MNMSTIRMENNNDQCRGRKIFVGGLSAELTEDEFKTYFEKFGQITDVVVMHDSVTNRPRGFGFITFDSVESVDSVLQNNFHELNGRRVEVKRAIPKKGNY

Query:  NAGHIPNARTLGGKSPLP--NRDVPFPYPYYGTGYTIYPGFTPFPHFGGPGVDLYGSNFYGNWFPPSFGNMASDGAWCSPNFFGVGMFPPPYRNFLISPS
        N GHIPNART GGKSPLP  NR+VPFPYPYYG+ Y +YPGFTPFPH+GGPGVDLYGS+ YGNWFPPSFGNMAS+G W  PNFFGVG+FPPPYRN LI P 
Subjt:  NAGHIPNARTLGGKSPLP--NRDVPFPYPYYGTGYTIYPGFTPFPHFGGPGVDLYGSNFYGNWFPPSFGNMASDGAWCSPNFFGVGMFPPPYRNFLISPS

Query:  FSSKGLSDTGTGNGM--AIRNGEIKQKTSGKRSMSADAVPFQIKDKT
        +SSKGLSDTGTGNGM    RNGEIKQ T+GKR MSADAVPFQIKD+T
Subjt:  FSSKGLSDTGTGNGM--AIRNGEIKQKTSGKRSMSADAVPFQIKDKT

TrEMBL top hitse value%identityAlignment
A0A0A0L563 RRM domain-containing protein7.2e-9676.23Show/hide
Query:  MSTIRMENNNDQCRGRKIFVGGLSAELTEDEFKTYFEKFGQITDVVVMHDSVTNRPRGFGFITFDSVESVDSVLQNNFHELNGRRVEVKRAIPKKGNYNA
        MST RM+NNNDQCRGRKIFVGGLSAELTE+EF++YFE FGQITDVVVMHDSVTNRPRGFGF+TF+S+ESVDSVLQ NFHELNGRRVEVKRAIPKKGNYN 
Subjt:  MSTIRMENNNDQCRGRKIFVGGLSAELTEDEFKTYFEKFGQITDVVVMHDSVTNRPRGFGFITFDSVESVDSVLQNNFHELNGRRVEVKRAIPKKGNYNA

Query:  GHIPNARTLGGKSPL--PNRDVPFPYPYYGTGYTIYPGFTPFPHFGGPGVDLYGSNFYGNWFPPSFGNMASDGAWCSPNFFGVGMFPPPYRNFLISPSFS
         HIPNAR    KSPL   NR+VPFPYPYYG+GY IYPGFT FPH+G   VD YGSNFYGNWFPP   N+ASDG W  PNFF VGM PP  RN L+ P   
Subjt:  GHIPNARTLGGKSPL--PNRDVPFPYPYYGTGYTIYPGFTPFPHFGGPGVDLYGSNFYGNWFPPSFGNMASDGAWCSPNFFGVGMFPPPYRNFLISPSFS

Query:  SKGLSDTGTGNGMA-IRNGEIKQKTSGKRSMSADAVPFQIKDKT
        SKG+   G+ NGMA  RNGEIKQ T+GKR MSADA PFQIKD+T
Subjt:  SKGLSDTGTGNGMA-IRNGEIKQKTSGKRSMSADAVPFQIKDKT

A0A5N6R9D7 Uncharacterized protein6.8e-4648.58Show/hide
Query:  ENNNDQCRGRKIFVGGLSAELTEDEFKTYFEKFGQITDVVVMHDSVTNRPRGFGFITFDSVESVDSVLQNNFHELNGRRVEVKRAIPKKGNYNAGHIPNA
        +N ++Q R +KIFVGGLSA LTE+EFK YF++FG++TDVVVMHDS T+RPRGFGFITFDS ESV++V+QN+FHELNGR VEVKRA+PK+ N  +    N 
Subjt:  ENNNDQCRGRKIFVGGLSAELTEDEFKTYFEKFGQITDVVVMHDSVTNRPRGFGFITFDSVESVDSVLQNNFHELNGRRVEVKRAIPKKGNYNAGHIPNA

Query:  RTLGGKSPLPNRDVPFPYPYYGTGYTIYPGFTPFPHFGGPGVDLYGSNFYGNWFPPS--------FGNMASDGAWCSPNFFGVGMFPPPYRNFLISPSFS
        R  GG      R  P  +P Y   Y I PG+ PFP F G G  LYG++ Y  W+P             +A    W  P   G G FP P  +  I P++ 
Subjt:  RTLGGKSPLPNRDVPFPYPYYGTGYTIYPGFTPFPHFGGPGVDLYGSNFYGNWFPPS--------FGNMASDGAWCSPNFFGVGMFPPPYRNFLISPSFS

Query:  SKGLSDTGTGNG
        + G+   G   G
Subjt:  SKGLSDTGTGNG

A0A6J1C724 RNA-binding protein 1-like2.8e-6356.97Show/hide
Query:  MNMSTIRMENNNDQCRGRKIFVGGLSAELTEDEFKTYFEKFGQITDVVVMHDSVTNRPRGFGFITFDSVESVDSVLQNNFHELNGRRVEVKRAIPKKGNY
        MN S+ RME+NNDQ RG+KIFVGGL ++LTE+EFK+YFEKFGQITDVVVM DSVTNRPRGFGFITFDSVESV+ VLQNNFHELNGRRVEVKRA+PK  N 
Subjt:  MNMSTIRMENNNDQCRGRKIFVGGLSAELTEDEFKTYFEKFGQITDVVVMHDSVTNRPRGFGFITFDSVESVDSVLQNNFHELNGRRVEVKRAIPKKGNY

Query:  NAGHIPNARTLGGKSPLPNRDVPFPYPYYGTGYTIYPGFTPFPHFGGPGVDLYGSNFYGNW-FPPSFGN------MASDGAWCSPNFFGVGMFPPPYRNF
        N+ +        GKSPL +  VP  YP++ +G  +YPG+ PFPH+       YGS+ YG+W +   +G       +    AW +PN FG GMFP PY N 
Subjt:  NAGHIPNARTLGGKSPLPNRDVPFPYPYYGTGYTIYPGFTPFPHFGGPGVDLYGSNFYGNW-FPPSFGN------MASDGAWCSPNFFGVGMFPPPYRNF

Query:  LISPSFSSKG--LSDTGTGNGMAIRNGEIKQKTSGKRSMSADAVPFQIKDK
        +I P +SSKG  L D   GNG   RNG          +MSADAVPFQ+ ++
Subjt:  LISPSFSSKG--LSDTGTGNGMAIRNGEIKQKTSGKRSMSADAVPFQIKDK

A0A6J1FS87 RNA-binding protein 1-like1.2e-7968.26Show/hide
Query:  DQCRGRKIFVGGLSAELTEDEFKTYFEKFGQITDVVVMHDSVTNRPRGFGFITFDSVESVDSVLQNNFHELNGRRVEVKRAIPKKGNYNAGHIPNARTLG
        DQ RGRKIFVGGLSAELTED+FK YFEKFG++TDVVVM DSVT RPRGFGFITFDSV+SVDSVLQNNFHELNGRRVEVKRAIPKKGNYN GHI       
Subjt:  DQCRGRKIFVGGLSAELTEDEFKTYFEKFGQITDVVVMHDSVTNRPRGFGFITFDSVESVDSVLQNNFHELNGRRVEVKRAIPKKGNYNAGHIPNARTLG

Query:  GKSPLPNRDVPFPYPYYGTGYTIYPGFTPFPHFGGPGVDLYGSNFYGNWFPPSFGNMASDGAWCSPNFFGVGMFPPPYRNFLISPSFSSKGLSDTGTGNG
         KSPL   +V   YPYY  GYT+YPGFTPFP + GPG  LYGS+ YGNWF PSFG MAS  AW +PNFF  GMFPPP++N L+ P++SS GLS    G  
Subjt:  GKSPLPNRDVPFPYPYYGTGYTIYPGFTPFPHFGGPGVDLYGSNFYGNWFPPSFGNMASDGAWCSPNFFGVGMFPPPYRNFLISPSFSSKGLSDTGTGNG

Query:  MAIRNGEIKQKTSGKRSMSADAVPFQIKDK
         A    ++   T  +++MSADAVPF  KDK
Subjt:  MAIRNGEIKQKTSGKRSMSADAVPFQIKDK

A0A6J1J2K5 RNA-binding protein 1-like2.1e-7967.37Show/hide
Query:  RMENNNDQCRGRKIFVGGLSAELTEDEFKTYFEKFGQITDVVVMHDSVTNRPRGFGFITFDSVESVDSVLQNNFHELNGRRVEVKRAIPKKGNYNAGHIP
        RME   DQ RGRKIFVGGLSAELTED+FK YFEKFG++TDVVVM DSVT RPRGFGFITFDSV+SVDSVLQNNFHELNGRRVEVKRAIPKKGNYN GHI 
Subjt:  RMENNNDQCRGRKIFVGGLSAELTEDEFKTYFEKFGQITDVVVMHDSVTNRPRGFGFITFDSVESVDSVLQNNFHELNGRRVEVKRAIPKKGNYNAGHIP

Query:  NARTLGGKSPLPNRDVPFPYPYYGTGYTIYPGFTPFPHFGGPGVDLYGSNFYGNWFPPSFGNMASDGAWCSPNFFGVGMFPPPYRNFLISPSFSSKGLSD
               KSPL   +V   YPYY  GYT+YPGFTPFP + GPG  LYGS+ YGNWF PSFG MAS  AW  PNFF  GMFPPP++N L+ P++SS GLS 
Subjt:  NARTLGGKSPLPNRDVPFPYPYYGTGYTIYPGFTPFPHFGGPGVDLYGSNFYGNWFPPSFGNMASDGAWCSPNFFGVGMFPPPYRNFLISPSFSSKGLSD

Query:  TGTGNGMAIRNGEIKQKTSGKRSMSADAVPFQIKDK
           G   A    +++  T  +++MSADAVPF  KD+
Subjt:  TGTGNGMAIRNGEIKQKTSGKRSMSADAVPFQIKDK

SwissProt top hitse value%identityAlignment
Q8W034 Heterogeneous nuclear ribonucleoprotein 13.1e-2742.13Show/hide
Query:  NMSTIRMENNNDQCRGRKIFVGGLSAELTEDEFKTYFEKFGQITDVVVMHDSVTNRPRGFGFITFDSVESVDSVLQNNFHELNGRRVEVKRAIPKKGNYN
        N++T R    +   + +KIFVGGL   LT++EF+ YFE +G +TDV +M+D  TNRPRGFGF++FDS ++VDSVL   FH+L+G++VEVKRA+PK  N  
Subjt:  NMSTIRMENNNDQCRGRKIFVGGLSAELTEDEFKTYFEKFGQITDVVVMHDSVTNRPRGFGFITFDSVESVDSVLQNNFHELNGRRVEVKRAIPKKGNYN

Query:  AGHIPNARTLGGKSPLPNRDVPFPYPYYGTGYTIYPGFTPFPHF-----GGPGVDLYGSNFYGNWFPPSFGNMASDGA
         G     R++GG            Y  YG   + Y G      F      G G+  YGS+ YG      +GN  S+GA
Subjt:  AGHIPNARTLGGKSPLPNRDVPFPYPYYGTGYTIYPGFTPFPHF-----GGPGVDLYGSNFYGNWFPPSFGNMASDGA

Q96EP5 DAZ-associated protein 11.1e-1932.43Show/hide
Query:  NDQCRGRKIFVGGLSAELTEDEFKTYFEKFGQITDVVVMHDSVTNRPRGFGFITFDSVESVDSVLQNNFHELNGRRVEVKRAIPKKGNYNAGHIPNARTL
        +D  +  KIFVGG+     E E + YF+KFG +T+VV+++D+   RPRGFGFITF+  +SVD  +  +FH++ G++VEVKRA P+     A   P A   
Subjt:  NDQCRGRKIFVGGLSAELTEDEFKTYFEKFGQITDVVVMHDSVTNRPRGFGFITFDSVESVDSVLQNNFHELNGRRVEVKRAIPKKGNYNAGHIPNARTL

Query:  GGKSPLPNRDVPFPYPYYGTGYTIYPGFTPFPHFGGPGVDLYGSNFYGNWFPPSFGNMASDGAWCSPNFFGVGMFPPPYRNFLIS
        G +            P    G+   P  T    +G  G+ +      G + PP  G              G    PPP+ ++++S
Subjt:  GGKSPLPNRDVPFPYPYYGTGYTIYPGFTPFPHFGGPGVDLYGSNFYGNWFPPSFGNMASDGAWCSPNFFGVGMFPPPYRNFLIS

Q9C652 RNA-binding protein 11.1e-3243.69Show/hide
Query:  QRMNMSTIRMENNNDQCRGRKIFVGGLSAELTEDEFKTYFEKFGQITDVVVMHDSVTNRPRGFGFITFDSVESVDSVLQNNFHELNGRRVEVKRAIPKKG
        Q+MN     M +N    R +KIFVGGLS+  TE+EFK+YFE+FG+ TDVVVMHD VTNRPRGFGF+T+DS +SV+ V+Q+NFHEL+ +RVEVKRAIPK+G
Subjt:  QRMNMSTIRMENNNDQCRGRKIFVGGLSAELTEDEFKTYFEKFGQITDVVVMHDSVTNRPRGFGFITFDSVESVDSVLQNNFHELNGRRVEVKRAIPKKG

Query:  ----NYNAGHIPNARTLGGKSP-LPNRD-----VPFPYPYYGTGYTIYPGFTPFPHFGGPGVDLYGSNFYGNWFPPSFGN--MASDGAWCSPNFFGVGMF
            N NA +IP + +    +P +P ++     + FP P +G  + +     P           YG  F       S+ N  M   G +C+P        
Subjt:  ----NYNAGHIPNARTLGGKSP-LPNRD-----VPFPYPYYGTGYTIYPGFTPFPHFGGPGVDLYGSNFYGNWFPPSFGN--MASDGAWCSPNFFGVGMF

Query:  PPPYRN
        PPP  N
Subjt:  PPPYRN

Q9JII5 DAZ-associated protein 18.1e-2032.43Show/hide
Query:  NDQCRGRKIFVGGLSAELTEDEFKTYFEKFGQITDVVVMHDSVTNRPRGFGFITFDSVESVDSVLQNNFHELNGRRVEVKRAIPKKGNYNAGHIPNARTL
        +D  +  KIFVGG+     E E + YF+KFG +T+VV+++D+   RPRGFGFITF+  +SVD  +  +FH++ G++VEVKRA P+     A   P A   
Subjt:  NDQCRGRKIFVGGLSAELTEDEFKTYFEKFGQITDVVVMHDSVTNRPRGFGFITFDSVESVDSVLQNNFHELNGRRVEVKRAIPKKGNYNAGHIPNARTL

Query:  GGKSPLPNRDVPFPYPYYGTGYTIYPGFTPFPHFGGPGVDLYGSNFYGNWFPPSFGNMASDGAWCSPNFFGVGMFPPPYRNFLIS
        G +            P    G+   P  T    +G  G+ +      G + PP  G              G    PPP+ ++++S
Subjt:  GGKSPLPNRDVPFPYPYYGTGYTIYPGFTPFPHFGGPGVDLYGSNFYGNWFPPSFGNMASDGAWCSPNFFGVGMFPPPYRNFLIS

Q9VVE5 RNA-binding protein Musashi homolog Rbp62.8e-2043.17Show/hide
Query:  RGRKIFVGGLSAELTEDEFKTYFEKFGQITDVVVMHDSVTNRPRGFGFITFDSVESVDSVLQNNFHELNGRRVEVKRAIPKK--------GNYNAGHIPN
        R +KIFVGGLSA  T ++ K+YFE+FG I D ++M D  TNR RGFGF+TF S + VD V + +FHE+N + VE K+A PK+            AG    
Subjt:  RGRKIFVGGLSAELTEDEFKTYFEKFGQITDVVVMHDSVTNRPRGFGFITFDSVESVDSVLQNNFHELNGRRVEVKRAIPKK--------GNYNAGHIPN

Query:  ARTLGGKSPLPNRDVPFPYPYY--GTGYTIYPGF-TPFP
           + G   LP       Y  Y  G GY+ YP F  P+P
Subjt:  ARTLGGKSPLPNRDVPFPYPYY--GTGYTIYPGF-TPFP

Arabidopsis top hitse value%identityAlignment
AT1G58470.1 RNA-binding protein 17.7e-3443.69Show/hide
Query:  QRMNMSTIRMENNNDQCRGRKIFVGGLSAELTEDEFKTYFEKFGQITDVVVMHDSVTNRPRGFGFITFDSVESVDSVLQNNFHELNGRRVEVKRAIPKKG
        Q+MN     M +N    R +KIFVGGLS+  TE+EFK+YFE+FG+ TDVVVMHD VTNRPRGFGF+T+DS +SV+ V+Q+NFHEL+ +RVEVKRAIPK+G
Subjt:  QRMNMSTIRMENNNDQCRGRKIFVGGLSAELTEDEFKTYFEKFGQITDVVVMHDSVTNRPRGFGFITFDSVESVDSVLQNNFHELNGRRVEVKRAIPKKG

Query:  ----NYNAGHIPNARTLGGKSP-LPNRD-----VPFPYPYYGTGYTIYPGFTPFPHFGGPGVDLYGSNFYGNWFPPSFGN--MASDGAWCSPNFFGVGMF
            N NA +IP + +    +P +P ++     + FP P +G  + +     P           YG  F       S+ N  M   G +C+P        
Subjt:  ----NYNAGHIPNARTLGGKSP-LPNRD-----VPFPYPYYGTGYTIYPGFTPFPHFGGPGVDLYGSNFYGNWFPPSFGN--MASDGAWCSPNFFGVGMF

Query:  PPPYRN
        PPP  N
Subjt:  PPPYRN

AT4G14300.1 RNA-binding (RRM/RBD/RNP motifs) family protein2.2e-2842.13Show/hide
Query:  NMSTIRMENNNDQCRGRKIFVGGLSAELTEDEFKTYFEKFGQITDVVVMHDSVTNRPRGFGFITFDSVESVDSVLQNNFHELNGRRVEVKRAIPKKGNYN
        N++T R    +   + +KIFVGGL   LT++EF+ YFE +G +TDV +M+D  TNRPRGFGF++FDS ++VDSVL   FH+L+G++VEVKRA+PK  N  
Subjt:  NMSTIRMENNNDQCRGRKIFVGGLSAELTEDEFKTYFEKFGQITDVVVMHDSVTNRPRGFGFITFDSVESVDSVLQNNFHELNGRRVEVKRAIPKKGNYN

Query:  AGHIPNARTLGGKSPLPNRDVPFPYPYYGTGYTIYPGFTPFPHF-----GGPGVDLYGSNFYGNWFPPSFGNMASDGA
         G     R++GG            Y  YG   + Y G      F      G G+  YGS+ YG      +GN  S+GA
Subjt:  AGHIPNARTLGGKSPLPNRDVPFPYPYYGTGYTIYPGFTPFPHF-----GGPGVDLYGSNFYGNWFPPSFGNMASDGA

AT4G26650.1 RNA-binding (RRM/RBD/RNP motifs) family protein7.5e-2946.84Show/hide
Query:  NNDQCRGRKIFVGGLSAELTEDEFKTYFEKFGQITDVVVMHDSVTNRPRGFGFITFDSVESVDSVLQNNFHELNGRRVEVKRAIPKKGNYNAGHIPNART
        N    R +KIFVGGL + +TE EFK YF++FG I DVVVM+D  T RPRGFGFITFDS ESVD VL   FHELNG+ VEVKRA+PK+ +           
Subjt:  NNDQCRGRKIFVGGLSAELTEDEFKTYFEKFGQITDVVVMHDSVTNRPRGFGFITFDSVESVDSVLQNNFHELNGRRVEVKRAIPKKGNYNAGHIPNART

Query:  LGGKSPLPNRDVPFPYPYYGTGYTIYPGFTPFPHFGGPGVDLYGSNFYGNWFPPSFGN
            S  PNR    P   YG  Y + P  +              +N Y N FPP + N
Subjt:  LGGKSPLPNRDVPFPYPYYGTGYTIYPGFTPFPHFGGPGVDLYGSNFYGNWFPPSFGN

AT4G26650.2 RNA-binding (RRM/RBD/RNP motifs) family protein7.5e-2946.84Show/hide
Query:  NNDQCRGRKIFVGGLSAELTEDEFKTYFEKFGQITDVVVMHDSVTNRPRGFGFITFDSVESVDSVLQNNFHELNGRRVEVKRAIPKKGNYNAGHIPNART
        N    R +KIFVGGL + +TE EFK YF++FG I DVVVM+D  T RPRGFGFITFDS ESVD VL   FHELNG+ VEVKRA+PK+ +           
Subjt:  NNDQCRGRKIFVGGLSAELTEDEFKTYFEKFGQITDVVVMHDSVTNRPRGFGFITFDSVESVDSVLQNNFHELNGRRVEVKRAIPKKGNYNAGHIPNART

Query:  LGGKSPLPNRDVPFPYPYYGTGYTIYPGFTPFPHFGGPGVDLYGSNFYGNWFPPSFGN
            S  PNR    P   YG  Y + P  +              +N Y N FPP + N
Subjt:  LGGKSPLPNRDVPFPYPYYGTGYTIYPGFTPFPHFGGPGVDLYGSNFYGNWFPPSFGN

AT5G47620.1 RNA-binding (RRM/RBD/RNP motifs) family protein2.4e-2741.75Show/hide
Query:  NMSTIRMENNNDQCRGRKIFVGGLSAELTEDEFKTYFEKFGQITDVVVMHDSVTNRPRGFGFITFDSVESVDSVLQNNFHELNGRRVEVKRAIPKKGNYN
        N S   ++ +      +KIFVGGL++ +TE EFK YF +FG ITDVVVM+D  T RPRGFGFI++DS E+VD VLQ  FHELNG+ VEVK A+PK    N
Subjt:  NMSTIRMENNNDQCRGRKIFVGGLSAELTEDEFKTYFEKFGQITDVVVMHDSVTNRPRGFGFITFDSVESVDSVLQNNFHELNGRRVEVKRAIPKKGNYN

Query:  A-GHIPNARTLGGK--SPLPNRDVPFPYPYYGTGYTIYP------------GFTPFPHFGGPGVDLYGSNF-------YGNWFPPSFGNMASDGAWCSPN
           +  N  + G    S L N       P   +GY + P            GF+PF H  G G++L   NF       YG+     FG   S G   S  
Subjt:  A-GHIPNARTLGGK--SPLPNRDVPFPYPYYGTGYTIYP------------GFTPFPHFGGPGVDLYGSNF-------YGNWFPPSFGNMASDGAWCSPN

Query:  FFGVGM
         FG  M
Subjt:  FFGVGM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAACGGAACAAAGAATGAATATGAGTACTATTAGGATGGAAAATAACAATGATCAGTGTAGGGGCAGAAAGATTTTTGTTGGGGGCTTATCAGCTGAATTGACTGA
GGATGAGTTTAAAACTTACTTTGAAAAGTTCGGTCAGATAACCGATGTAGTTGTGATGCATGATAGTGTAACCAACCGCCCTAGAGGATTTGGATTCATCACATTTGATT
CTGTAGAATCTGTTGACTCTGTTCTGCAGAATAACTTTCATGAGCTGAATGGTAGGCGTGTGGAGGTGAAGAGAGCTATCCCAAAAAAGGGAAACTACAATGCTGGTCAT
ATTCCCAATGCTAGAACACTGGGAGGAAAAAGCCCTCTTCCTAACAGGGATGTTCCTTTCCCTTACCCATATTATGGTACTGGTTATACAATTTATCCTGGTTTTACACC
TTTTCCGCATTTTGGAGGACCAGGAGTTGATTTGTATGGTTCAAACTTCTATGGGAATTGGTTTCCCCCTAGCTTTGGTAACATGGCTTCCGACGGCGCATGGTGCAGTC
CAAATTTTTTTGGTGTTGGGATGTTTCCTCCACCTTACAGAAATTTTCTAATTTCTCCATCATTCTCAAGCAAGGGGCTCTCAGATACAGGGACTGGAAATGGAATGGCA
ATAAGAAACGGGGAGATAAAGCAGAAAACTTCTGGAAAGCGAAGTATGTCAGCGGATGCAGTGCCATTTCAGATCAAAGACAAAACTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAACGGAACAAAGAATGAATATGAGTACTATTAGGATGGAAAATAACAATGATCAGTGTAGGGGCAGAAAGATTTTTGTTGGGGGCTTATCAGCTGAATTGACTGA
GGATGAGTTTAAAACTTACTTTGAAAAGTTCGGTCAGATAACCGATGTAGTTGTGATGCATGATAGTGTAACCAACCGCCCTAGAGGATTTGGATTCATCACATTTGATT
CTGTAGAATCTGTTGACTCTGTTCTGCAGAATAACTTTCATGAGCTGAATGGTAGGCGTGTGGAGGTGAAGAGAGCTATCCCAAAAAAGGGAAACTACAATGCTGGTCAT
ATTCCCAATGCTAGAACACTGGGAGGAAAAAGCCCTCTTCCTAACAGGGATGTTCCTTTCCCTTACCCATATTATGGTACTGGTTATACAATTTATCCTGGTTTTACACC
TTTTCCGCATTTTGGAGGACCAGGAGTTGATTTGTATGGTTCAAACTTCTATGGGAATTGGTTTCCCCCTAGCTTTGGTAACATGGCTTCCGACGGCGCATGGTGCAGTC
CAAATTTTTTTGGTGTTGGGATGTTTCCTCCACCTTACAGAAATTTTCTAATTTCTCCATCATTCTCAAGCAAGGGGCTCTCAGATACAGGGACTGGAAATGGAATGGCA
ATAAGAAACGGGGAGATAAAGCAGAAAACTTCTGGAAAGCGAAGTATGTCAGCGGATGCAGTGCCATTTCAGATCAAAGACAAAACTTGA
Protein sequenceShow/hide protein sequence
MATEQRMNMSTIRMENNNDQCRGRKIFVGGLSAELTEDEFKTYFEKFGQITDVVVMHDSVTNRPRGFGFITFDSVESVDSVLQNNFHELNGRRVEVKRAIPKKGNYNAGH
IPNARTLGGKSPLPNRDVPFPYPYYGTGYTIYPGFTPFPHFGGPGVDLYGSNFYGNWFPPSFGNMASDGAWCSPNFFGVGMFPPPYRNFLISPSFSSKGLSDTGTGNGMA
IRNGEIKQKTSGKRSMSADAVPFQIKDKT