; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

ClCG06G002000 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG06G002000
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionDUF4408 domain-containing protein
Genome locationCG_Chr06:2139173..2139864
RNA-Seq ExpressionClCG06G002000
SyntenyClCG06G002000
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR025520 - Domain of unknown function DUF4408


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039829.1 DUF4408 domain-containing protein [Cucumis melo var. makuwa]5.4e-6375.39Show/hide
Query:  MDVINAEKLFAIKYCYKKSQLFFYNLTLFHSL-IIFFFTFCL-SSQSHCFPPHALSSTIKMVITPPSFFSPNCLFVVVNFIVVYIVGEQKL-----AWMN
        MDVINAEKLFAIKYCYKKSQLF YNL LF SL IIFFFT+ L SSQSH FPP  +SS IK+VITPPSFFSP+CLFV+VNFIVVYIVGEQKL     A MN
Subjt:  MDVINAEKLFAIKYCYKKSQLFFYNLTLFHSL-IIFFFTFCL-SSQSHCFPPHALSSTIKMVITPPSFFSPNCLFVVVNFIVVYIVGEQKL-----AWMN

Query:  KMYDEYYIERTMEMN--MNPCDNMKQLVQKVVEEKEAEEIAVADRRSHGVNGSKKESEGNCELANEELNKRAEAFIARVNKQRKLEAVDCY
         MYDEYYIERTMEM   +NPC+NMKQLV+K VEEKE E I   D   +GV+   KE+EG+C+ ANEELNKRAEAFIARVNKQRKLEAVDC+
Subjt:  KMYDEYYIERTMEMN--MNPCDNMKQLVQKVVEEKEAEEIAVADRRSHGVNGSKKESEGNCELANEELNKRAEAFIARVNKQRKLEAVDCY

KAE8646757.1 hypothetical protein Csa_004884 [Cucumis sativus]3.2e-6374.33Show/hide
Query:  MDVINAEKLFAIKYCYKKSQLFFYNLTLFHSLIIFFFTFCLSSQSHCFPPHALSSTIKMVITPPSFFSPNCLFVVVNFIVVYIVGEQKL-----AWMNKM
        MDVINAEKLFAIKYCYKKSQLF YNL +FHSLI  FFT+ LSSQSH FPP  +SS IKMV TPPSFFSP+CLFV+VNFIVVYIVGEQKL     A+MN M
Subjt:  MDVINAEKLFAIKYCYKKSQLFFYNLTLFHSLIIFFFTFCLSSQSHCFPPHALSSTIKMVITPPSFFSPNCLFVVVNFIVVYIVGEQKL-----AWMNKM

Query:  YDEYYIERTMEMN-MNPCDNMKQL-VQKVVEEKEAEEIAVADRRSHGVNGSKKESEGNCELANEELNKRAEAFIARVNKQRKLEAVD
        YDEYYIERT+EM  +NPC+NMK+L V+K VEEKE E I+  +   +G+  S+KE+EG+C+LANEELNKRAEAFIARVNKQRKLEAVD
Subjt:  YDEYYIERTMEMN-MNPCDNMKQL-VQKVVEEKEAEEIAVADRRSHGVNGSKKESEGNCELANEELNKRAEAFIARVNKQRKLEAVD

PQQ10153.1 zinc finger E-box-binding homeobox 1 [Prunus yedoensis var. nudiflora]2.0e-1233.05Show/hide
Query:  MDVINAEKLFAIKYCYKK---SQLFFYNLTLFHSLIIFFFTFCLSSQSHCFPPHALSSTIKMVITPPS---FFSPNCLFVVVNFIVVYIVGEQKLAW---
        MD IN +KL A+K  YKK   SQ+F+   +L   L+I      L S SH FP    +  +  +  P S   FF+P CLF+VVNFIVV+++GE +L+    
Subjt:  MDVINAEKLFAIKYCYKK---SQLFFYNLTLFHSLIIFFFTFCLSSQSHCFPPHALSSTIKMVITPPS---FFSPNCLFVVVNFIVVYIVGEQKLAW---

Query:  --MNKMYDEY-------------YIERTMEMNMNPCDNMKQLVQKVVEEKEAEEI----------------------------------AVADRRSHGVN
           N+MY+EY             ++E+  E  +    + K+   K++EEKE +E                                      +++   + 
Subjt:  --MNKMYDEY-------------YIERTMEMNMNPCDNMKQLVQKVVEEKEAEEI----------------------------------AVADRRSHGVN

Query:  GSKKESEGNCELANEELNKRAEAFIARVNKQRKLEA
          K+E E    +  EELNKR EAFIARVNKQR LEA
Subjt:  GSKKESEGNCELANEELNKRAEAFIARVNKQRKLEA

XP_007221609.1 zinc finger E-box-binding homeobox 1 [Prunus persica]5.2e-1335.24Show/hide
Query:  MDVINAEKLFAIKYCYKK---SQLFFYNLTLFHSLIIFFFTFCLSSQSHCFPPHALSSTIKMVITPPS---FFSPNCLFVVVNFIVVYIVGEQKLAW---
        MD I  EKL A+K  YKK   SQ+F+   +L   L+I      L S SH FP    +  +  +  P S   FF+P CLF+VVNFIVV+++GE +L+    
Subjt:  MDVINAEKLFAIKYCYKK---SQLFFYNLTLFHSLIIFFFTFCLSSQSHCFPPHALSSTIKMVITPPS---FFSPNCLFVVVNFIVVYIVGEQKLAW---

Query:  --MNKMYDEY-------------YIERTMEMNMNPCDNMKQLVQKVVEEKEAEEI-------------------------AVADRRSHGVNGSKKESEGN
           N+MY+EY             + E+  E    P  + K+   K++EEKE +E                             +++   +   KKE E  
Subjt:  --MNKMYDEY-------------YIERTMEMNMNPCDNMKQLVQKVVEEKEAEEI-------------------------AVADRRSHGVNGSKKESEGN

Query:  CELANEELNKRAEAFIARVNKQRKLEA
          +  EELNKR EAFIARVNKQR LEA
Subjt:  CELANEELNKRAEAFIARVNKQRKLEA

XP_038875115.1 uncharacterized protein LOC120067646 [Benincasa hispida]1.9e-6877.13Show/hide
Query:  MDVINAEKLFAIKYCYKKSQLFFYNLTLFHSLIIFFFTFCLSSQSHCFPPHALSSTIKMVITPPSFFSPNCLFVVVNFIVVYIVGEQKLAW------MNK
        MDVI+AEKLFAIKYCYKKSQLF YNL LFHSLIIFFFTF LSSQ  CFPP ALSS I MV+ PPSFFSP+C FV+VNFIV+YIVGEQKLA       MNK
Subjt:  MDVINAEKLFAIKYCYKKSQLFFYNLTLFHSLIIFFFTFCLSSQSHCFPPHALSSTIKMVITPPSFFSPNCLFVVVNFIVVYIVGEQKLAW------MNK

Query:  MYDEYYIERTMEMNMNPCDNMKQLVQKVVEEKEAEEIAVADRRSHGVNGSKK-ESEGNCELANEELNKRAEAFIARVNKQRKLEAVDC
        MYDEYYI +TMEMNMN C+NMKQLV+KVVEEKE EE+   +  + GV+ S+K E+EG+CELANEELNKRAEAFIARVNKQRKLEAVDC
Subjt:  MYDEYYIERTMEMNMNPCDNMKQLVQKVVEEKEAEEIAVADRRSHGVNGSKK-ESEGNCELANEELNKRAEAFIARVNKQRKLEAVDC

TrEMBL top hitse value%identityAlignment
A0A0A0K9L0 DUF4408 domain-containing protein6.3e-6574.07Show/hide
Query:  MDVINAEKLFAIKYCYKKSQLFFYNLTLFHSLIIFFFTFCLSSQSHCFPPHALSSTIKMVITPPSFFSPNCLFVVVNFIVVYIVGEQKL-----AWMNKM
        MDVINAEKLFAIKYCYKKSQLF YNL +FHSLI  FFT+ LSSQSH FPP  +SS IKMV TPPSFFSP+CLFV+VNFIVVYIVGEQKL     A+MN M
Subjt:  MDVINAEKLFAIKYCYKKSQLFFYNLTLFHSLIIFFFTFCLSSQSHCFPPHALSSTIKMVITPPSFFSPNCLFVVVNFIVVYIVGEQKL-----AWMNKM

Query:  YDEYYIERTMEMN-MNPCDNMKQL-VQKVVEEKEAEEIAVADRRSHGVNGSKKESEGNCELANEELNKRAEAFIARVNKQRKLEAVDCY
        YDEYYIERT+EM  +NPC+NMK+L V+K VEEKE E I+  +   +G+  S+KE+EG+C+LANEELNKRAEAFIARVNKQRKLEAVDC+
Subjt:  YDEYYIERTMEMN-MNPCDNMKQL-VQKVVEEKEAEEIAVADRRSHGVNGSKKESEGNCELANEELNKRAEAFIARVNKQRKLEAVDCY

A0A314YTX2 Zinc finger E-box-binding homeobox 19.5e-1333.05Show/hide
Query:  MDVINAEKLFAIKYCYKK---SQLFFYNLTLFHSLIIFFFTFCLSSQSHCFPPHALSSTIKMVITPPS---FFSPNCLFVVVNFIVVYIVGEQKLAW---
        MD IN +KL A+K  YKK   SQ+F+   +L   L+I      L S SH FP    +  +  +  P S   FF+P CLF+VVNFIVV+++GE +L+    
Subjt:  MDVINAEKLFAIKYCYKK---SQLFFYNLTLFHSLIIFFFTFCLSSQSHCFPPHALSSTIKMVITPPS---FFSPNCLFVVVNFIVVYIVGEQKLAW---

Query:  --MNKMYDEY-------------YIERTMEMNMNPCDNMKQLVQKVVEEKEAEEI----------------------------------AVADRRSHGVN
           N+MY+EY             ++E+  E  +    + K+   K++EEKE +E                                      +++   + 
Subjt:  --MNKMYDEY-------------YIERTMEMNMNPCDNMKQLVQKVVEEKEAEEI----------------------------------AVADRRSHGVN

Query:  GSKKESEGNCELANEELNKRAEAFIARVNKQRKLEA
          K+E E    +  EELNKR EAFIARVNKQR LEA
Subjt:  GSKKESEGNCELANEELNKRAEAFIARVNKQRKLEA

A0A5D3DN17 DUF4408 domain-containing protein2.6e-6375.39Show/hide
Query:  MDVINAEKLFAIKYCYKKSQLFFYNLTLFHSL-IIFFFTFCL-SSQSHCFPPHALSSTIKMVITPPSFFSPNCLFVVVNFIVVYIVGEQKL-----AWMN
        MDVINAEKLFAIKYCYKKSQLF YNL LF SL IIFFFT+ L SSQSH FPP  +SS IK+VITPPSFFSP+CLFV+VNFIVVYIVGEQKL     A MN
Subjt:  MDVINAEKLFAIKYCYKKSQLFFYNLTLFHSL-IIFFFTFCL-SSQSHCFPPHALSSTIKMVITPPSFFSPNCLFVVVNFIVVYIVGEQKL-----AWMN

Query:  KMYDEYYIERTMEMN--MNPCDNMKQLVQKVVEEKEAEEIAVADRRSHGVNGSKKESEGNCELANEELNKRAEAFIARVNKQRKLEAVDCY
         MYDEYYIERTMEM   +NPC+NMKQLV+K VEEKE E I   D   +GV+   KE+EG+C+ ANEELNKRAEAFIARVNKQRKLEAVDC+
Subjt:  KMYDEYYIERTMEMN--MNPCDNMKQLVQKVVEEKEAEEIAVADRRSHGVNGSKKESEGNCELANEELNKRAEAFIARVNKQRKLEAVDCY

A0A5E4EWE0 PREDICTED: L484_0101332.8e-1234.76Show/hide
Query:  MDVINAEKLFAIKYCYKK---SQLFFYNLTLFHSLIIFFFTFCLSSQSHCFPPHALSSTIKMVITPPS---FFSPNCLFVVVNFIVVYIVGEQKLAW---
        MD I  EKL A+K  YKK   SQ+F+   +L   L+I      L S SH FP    +  +  +  P S   FF+P CLF+VVNFIVV+++GE +L+    
Subjt:  MDVINAEKLFAIKYCYKK---SQLFFYNLTLFHSLIIFFFTFCLSSQSHCFPPHALSSTIKMVITPPS---FFSPNCLFVVVNFIVVYIVGEQKLAW---

Query:  --MNKMYDEY-------------YIERTMEMNMNPCDNMKQLVQKVVEEKEAEEI-------------------------AVADRRSHGVNGSKKESEGN
           N+MY+EY             + E+  E    P  + K+   K++EEKE +E                             +++   +   KKE E  
Subjt:  --MNKMYDEY-------------YIERTMEMNMNPCDNMKQLVQKVVEEKEAEEI-------------------------AVADRRSHGVNGSKKESEGN

Query:  CE------LANEELNKRAEAFIARVNKQRKLEA
         E      +  EELNKR EAFIARVNKQR LEA
Subjt:  CE------LANEELNKRAEAFIARVNKQRKLEA

M5XMS0 DUF4408 domain-containing protein2.5e-1335.24Show/hide
Query:  MDVINAEKLFAIKYCYKK---SQLFFYNLTLFHSLIIFFFTFCLSSQSHCFPPHALSSTIKMVITPPS---FFSPNCLFVVVNFIVVYIVGEQKLAW---
        MD I  EKL A+K  YKK   SQ+F+   +L   L+I      L S SH FP    +  +  +  P S   FF+P CLF+VVNFIVV+++GE +L+    
Subjt:  MDVINAEKLFAIKYCYKK---SQLFFYNLTLFHSLIIFFFTFCLSSQSHCFPPHALSSTIKMVITPPS---FFSPNCLFVVVNFIVVYIVGEQKLAW---

Query:  --MNKMYDEY-------------YIERTMEMNMNPCDNMKQLVQKVVEEKEAEEI-------------------------AVADRRSHGVNGSKKESEGN
           N+MY+EY             + E+  E    P  + K+   K++EEKE +E                             +++   +   KKE E  
Subjt:  --MNKMYDEY-------------YIERTMEMNMNPCDNMKQLVQKVVEEKEAEEI-------------------------AVADRRSHGVNGSKKESEGN

Query:  CELANEELNKRAEAFIARVNKQRKLEA
          +  EELNKR EAFIARVNKQR LEA
Subjt:  CELANEELNKRAEAFIARVNKQRKLEA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGTCATCAATGCAGAGAAGCTTTTTGCCATAAAATATTGTTACAAGAAAAGCCAACTCTTCTTCTACAATCTCACTCTTTTTCACTCTCTCATCATCTTCTTCTT
TACCTTTTGCCTTTCTTCCCAATCTCATTGCTTTCCTCCCCACGCGCTTTCTTCGACGATCAAAATGGTCATTACGCCGCCCTCGTTCTTCAGCCCGAATTGCTTGTTTG
TTGTCGTTAATTTCATCGTCGTCTACATCGTTGGGGAACAAAAGCTCGCTTGGATGAACAAAATGTATGACGAATACTACATTGAGAGGACCATGGAGATGAACATGAAT
CCTTGTGATAATATGAAACAATTGGTTCAGAAAGTGGTGGAAGAAAAAGAAGCGGAAGAGATCGCCGTCGCCGACCGACGAAGCCACGGTGTCAATGGGAGTAAAAAAGA
GAGTGAAGGCAATTGCGAGTTGGCCAATGAAGAGTTGAACAAAAGAGCAGAAGCCTTCATTGCAAGAGTTAACAAGCAAAGGAAGCTTGAAGCTGTGGATTGTTACTAA
mRNA sequenceShow/hide mRNA sequence
TGAAACAATAGGGGGTTTCAAGTTTTTCTTAAAAAATTTCCCTCCAAAACTTCCCAAAGTTAAAAGTGTCAAAATCTGAAACCAACAACAAAAGAAAACCCTAAAAAAAA
TGGATGTCATCAATGCAGAGAAGCTTTTTGCCATAAAATATTGTTACAAGAAAAGCCAACTCTTCTTCTACAATCTCACTCTTTTTCACTCTCTCATCATCTTCTTCTTT
ACCTTTTGCCTTTCTTCCCAATCTCATTGCTTTCCTCCCCACGCGCTTTCTTCGACGATCAAAATGGTCATTACGCCGCCCTCGTTCTTCAGCCCGAATTGCTTGTTTGT
TGTCGTTAATTTCATCGTCGTCTACATCGTTGGGGAACAAAAGCTCGCTTGGATGAACAAAATGTATGACGAATACTACATTGAGAGGACCATGGAGATGAACATGAATC
CTTGTGATAATATGAAACAATTGGTTCAGAAAGTGGTGGAAGAAAAAGAAGCGGAAGAGATCGCCGTCGCCGACCGACGAAGCCACGGTGTCAATGGGAGTAAAAAAGAG
AGTGAAGGCAATTGCGAGTTGGCCAATGAAGAGTTGAACAAAAGAGCAGAAGCCTTCATTGCAAGAGTTAACAAGCAAAGGAAGCTTGAAGCTGTGGATTGTTACTAAGC
CAAGTTTTTATCTTTCGTCCTTTGTTTTTTTT
Protein sequenceShow/hide protein sequence
MDVINAEKLFAIKYCYKKSQLFFYNLTLFHSLIIFFFTFCLSSQSHCFPPHALSSTIKMVITPPSFFSPNCLFVVVNFIVVYIVGEQKLAWMNKMYDEYYIERTMEMNMN
PCDNMKQLVQKVVEEKEAEEIAVADRRSHGVNGSKKESEGNCELANEELNKRAEAFIARVNKQRKLEAVDCY