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ClCG06G004085 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG06G004085
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionMannan endo-1,4-beta-mannosidase
Genome locationCG_Chr06:4665845..4666346
RNA-Seq ExpressionClCG06G004085
SyntenyClCG06G004085
Gene Ontology termsGO:0071704 - organic substance metabolic process (biological process)
GO:0005576 - extracellular region (cellular component)
GO:0016985 - mannan endo-1,4-beta-mannosidase activity (molecular function)
InterPro domainsIPR035992 - Ricin B-like lectins


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575267.1 hypothetical protein SDJN03_25906, partial [Cucurbita argyrosperma subsp. sororia]1.0e-3076.4Show/hide
Query:  MLQDPSSNASSSYVMYHPQSGQCAQVSNDNTGIFLSNCSTSSQWSHGDDGTPIKRRTNGLCLKANGEGVGASLSSDCLGQQSVWRAISN
        MLQDP+SNAS SY++YHPQSGQCAQ SN++T IFLS CSTSS+WSHGD G  IK  T GLCLKANGEG+G SLSSDCL Q SVWR ISN
Subjt:  MLQDPSSNASSSYVMYHPQSGQCAQVSNDNTGIFLSNCSTSSQWSHGDDGTPIKRRTNGLCLKANGEGVGASLSSDCLGQQSVWRAISN

XP_022157219.1 uncharacterized protein LOC111023982 [Momordica charantia]9.2e-3278.65Show/hide
Query:  MLQDPSSNASSSYVMYHPQSGQCAQVSNDNTGIFLSNCSTSSQWSHGDDGTPIKRRTNGLCLKANGEGVGASLSSDCLGQQSVWRAISN
        MLQDP+SNASSSYVMYHPQSGQC   SNDN  +FLSNC TSS+WSHG DGTPIK  T GLC+KANGE +G SLSSDCLGQ S WRAISN
Subjt:  MLQDPSSNASSSYVMYHPQSGQCAQVSNDNTGIFLSNCSTSSQWSHGDDGTPIKRRTNGLCLKANGEGVGASLSSDCLGQQSVWRAISN

XP_022158418.1 uncharacterized protein LOC111024912, partial [Momordica charantia]8.3e-3382.02Show/hide
Query:  MLQDPSSNASSSYVMYHPQSGQCAQVSNDNTGIFLSNCSTSSQWSHGDDGTPIKRRTNGLCLKANGEGVGASLSSDCLGQQSVWRAISN
        MLQDP+SNASSSYVMYHPQSGQC   SNDN GIFLS+CSTSS+WSHG DGT IK  T GLCLKANGEG+  SLSSDCL QQSVWRAISN
Subjt:  MLQDPSSNASSSYVMYHPQSGQCAQVSNDNTGIFLSNCSTSSQWSHGDDGTPIKRRTNGLCLKANGEGVGASLSSDCLGQQSVWRAISN

XP_022958844.1 uncharacterized protein LOC111459997 [Cucurbita moschata]9.2e-3277.53Show/hide
Query:  MLQDPSSNASSSYVMYHPQSGQCAQVSNDNTGIFLSNCSTSSQWSHGDDGTPIKRRTNGLCLKANGEGVGASLSSDCLGQQSVWRAISN
        MLQDP+SNAS SY++YHPQSGQCAQ SN++T IFLS+CSTSS+WSHGD G  IK  T GLCLKANGEG+G SLSSDCL QQSVWR ISN
Subjt:  MLQDPSSNASSSYVMYHPQSGQCAQVSNDNTGIFLSNCSTSSQWSHGDDGTPIKRRTNGLCLKANGEGVGASLSSDCLGQQSVWRAISN

XP_038900453.1 glycosyl hydrolase 5 family protein-like [Benincasa hispida]4.1e-3276.4Show/hide
Query:  MLQDPSSNASSSYVMYHPQSGQCAQVSNDNTGIFLSNCSTSSQWSHGDDGTPIKRRTNGLCLKANGEGVGASLSSDCLGQQSVWRAISN
        MLQDP+SNAS+SYVMYHPQSGQC Q  +DN G+FL+NCST S+WSH  DG+PI+ R+ GLCLKANGEG+GASLSSDCL QQS WRAISN
Subjt:  MLQDPSSNASSSYVMYHPQSGQCAQVSNDNTGIFLSNCSTSSQWSHGDDGTPIKRRTNGLCLKANGEGVGASLSSDCLGQQSVWRAISN

TrEMBL top hitse value%identityAlignment
A0A1S3BDI2 Mannan endo-1,4-beta-mannosidase6.4e-3175.28Show/hide
Query:  MLQDPSSNASSSYVMYHPQSGQCAQVSNDNTGIFLSNCSTSSQWSHGDDGTPIKRRTNGLCLKANGEGVGASLSSDCLGQQSVWRAISN
        MLQDP+SNAS SYV+YHPQSGQC +VSNDN  IFL+NCSTSS+WSH +D TPIK    GLCLKA+GEG+ ASLS+DCLG+QSVW AISN
Subjt:  MLQDPSSNASSSYVMYHPQSGQCAQVSNDNTGIFLSNCSTSSQWSHGDDGTPIKRRTNGLCLKANGEGVGASLSSDCLGQQSVWRAISN

A0A5D3D4P4 Mannan endo-1,4-beta-mannosidase6.4e-3175.28Show/hide
Query:  MLQDPSSNASSSYVMYHPQSGQCAQVSNDNTGIFLSNCSTSSQWSHGDDGTPIKRRTNGLCLKANGEGVGASLSSDCLGQQSVWRAISN
        MLQDP+SNAS SYV+YHPQSGQC +VSNDN  IFL+NCSTSS+WSH +D TPIK    GLCLKA+GEG+ ASLS+DCLG+QSVW AISN
Subjt:  MLQDPSSNASSSYVMYHPQSGQCAQVSNDNTGIFLSNCSTSSQWSHGDDGTPIKRRTNGLCLKANGEGVGASLSSDCLGQQSVWRAISN

A0A6J1DVV8 Mannan endo-1,4-beta-mannosidase4.5e-3278.65Show/hide
Query:  MLQDPSSNASSSYVMYHPQSGQCAQVSNDNTGIFLSNCSTSSQWSHGDDGTPIKRRTNGLCLKANGEGVGASLSSDCLGQQSVWRAISN
        MLQDP+SNASSSYVMYHPQSGQC   SNDN  +FLSNC TSS+WSHG DGTPIK  T GLC+KANGE +G SLSSDCLGQ S WRAISN
Subjt:  MLQDPSSNASSSYVMYHPQSGQCAQVSNDNTGIFLSNCSTSSQWSHGDDGTPIKRRTNGLCLKANGEGVGASLSSDCLGQQSVWRAISN

A0A6J1DW12 uncharacterized protein LOC1110249124.0e-3382.02Show/hide
Query:  MLQDPSSNASSSYVMYHPQSGQCAQVSNDNTGIFLSNCSTSSQWSHGDDGTPIKRRTNGLCLKANGEGVGASLSSDCLGQQSVWRAISN
        MLQDP+SNASSSYVMYHPQSGQC   SNDN GIFLS+CSTSS+WSHG DGT IK  T GLCLKANGEG+  SLSSDCL QQSVWRAISN
Subjt:  MLQDPSSNASSSYVMYHPQSGQCAQVSNDNTGIFLSNCSTSSQWSHGDDGTPIKRRTNGLCLKANGEGVGASLSSDCLGQQSVWRAISN

A0A6J1H6A6 Mannan endo-1,4-beta-mannosidase4.5e-3277.53Show/hide
Query:  MLQDPSSNASSSYVMYHPQSGQCAQVSNDNTGIFLSNCSTSSQWSHGDDGTPIKRRTNGLCLKANGEGVGASLSSDCLGQQSVWRAISN
        MLQDP+SNAS SY++YHPQSGQCAQ SN++T IFLS+CSTSS+WSHGD G  IK  T GLCLKANGEG+G SLSSDCL QQSVWR ISN
Subjt:  MLQDPSSNASSSYVMYHPQSGQCAQVSNDNTGIFLSNCSTSSQWSHGDDGTPIKRRTNGLCLKANGEGVGASLSSDCLGQQSVWRAISN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGCAAGATCCAAGTTCCAATGCATCGTCTTCTTATGTTATGTATCATCCACAAAGTGGTCAATGTGCCCAAGTTTCAAATGACAATACTGGAATTTTTTTGAGTAA
TTGTTCCACCTCAAGTCAATGGAGTCATGGTGATGATGGCACTCCAATCAAAAGGAGGACAAATGGTTTGTGTTTAAAGGCTAATGGCGAAGGTGTTGGAGCATCCCTCT
CAAGTGATTGTTTGGGTCAACAAAGTGTTTGGAGAGCAATTTCTAACGTAATCTTCATTTGGCCACTGTCACTCAAGATGGGAAGAGTCTTTGCTTGTAGGTTGAAAGCT
CCAATTCTTCAAAAATTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTGCAAGATCCAAGTTCCAATGCATCGTCTTCTTATGTTATGTATCATCCACAAAGTGGTCAATGTGCCCAAGTTTCAAATGACAATACTGGAATTTTTTTGAGTAA
TTGTTCCACCTCAAGTCAATGGAGTCATGGTGATGATGGCACTCCAATCAAAAGGAGGACAAATGGTTTGTGTTTAAAGGCTAATGGCGAAGGTGTTGGAGCATCCCTCT
CAAGTGATTGTTTGGGTCAACAAAGTGTTTGGAGAGCAATTTCTAACGTAATCTTCATTTGGCCACTGTCACTCAAGATGGGAAGAGTCTTTGCTTGTAGGTTGAAAGCT
CCAATTCTTCAAAAATTGTGA
Protein sequenceShow/hide protein sequence
MLQDPSSNASSSYVMYHPQSGQCAQVSNDNTGIFLSNCSTSSQWSHGDDGTPIKRRTNGLCLKANGEGVGASLSSDCLGQQSVWRAISNVIFIWPLSLKMGRVFACRLKA
PILQKL