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ClCG06G004380 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG06G004380
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionUnknown protein
Genome locationCG_Chr06:5012715..5013201
RNA-Seq ExpressionClCG06G004380
SyntenyClCG06G004380
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG2395431.1 Gibberellin 2-beta-dioxygenase [Vigna angularis]1.7e-0859.68Show/hide
Query:  SLLDLVRPFLDLVRPNTIAFPFTIHLISYSILGNTHMEFEYNLSLFPPNSSSPSLSIPLELH
        +LLDLVRPFLDLVRP+T++  F    +   I  +T +EF+  LSL PPNSSSPSLSIP EL+
Subjt:  SLLDLVRPFLDLVRPNTIAFPFTIHLISYSILGNTHMEFEYNLSLFPPNSSSPSLSIPLELH
TrEMBL top hitse value%identityAlignment
A0A2P2J7N9 Uncharacterized protein4.3e-0554.1Show/hide
Query:  SLLDLVRPFLDLVRPNTIAFPFTIHLISYSILGNTHMEFEYNLSLFPPNSSSPSLSIPLEL
        +LLDLVRPFLDLVRP ++  P  + +    I  +  ++ EY L LFP NSSS SLSIP EL
Subjt:  SLLDLVRPFLDLVRPNTIAFPFTIHLISYSILGNTHMEFEYNLSLFPPNSSSPSLSIPLEL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTGAGTGGTCAGATTCAAATTGGTGGCATGCATGGACCAACCAAGCCAACCACCATGGCCGTGGTCTCATCTTCAACAAGAGGAAGATGAAGAAATTAAGAACAAA
AATTTCCGTTTTGAGATTGAGTCTTCTTGACCTTGTAAGACCTTTTCTTGACCTTGTAAGACCCAACACCATAGCCTTTCCCTTTACCATCCATTTGATTTCATACTCTA
TTTTGGGAAATACCCATATGGAGTTTGAGTACAATCTATCCCTATTTCCACCCAACTCATCTTCTCCTTCCTTGTCTATCCCTCTTGAGCTACATTTAATTAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTTGAGTGGTCAGATTCAAATTGGTGGCATGCATGGACCAACCAAGCCAACCACCATGGCCGTGGTCTCATCTTCAACAAGAGGAAGATGAAGAAATTAAGAACAAA
AATTTCCGTTTTGAGATTGAGTCTTCTTGACCTTGTAAGACCTTTTCTTGACCTTGTAAGACCCAACACCATAGCCTTTCCCTTTACCATCCATTTGATTTCATACTCTA
TTTTGGGAAATACCCATATGGAGTTTGAGTACAATCTATCCCTATTTCCACCCAACTCATCTTCTCCTTCCTTGTCTATCCCTCTTGAGCTACATTTAATTAATTAA
Protein sequenceShow/hide protein sequence
MVEWSDSNWWHAWTNQANHHGRGLIFNKRKMKKLRTKISVLRLSLLDLVRPFLDLVRPNTIAFPFTIHLISYSILGNTHMEFEYNLSLFPPNSSSPSLSIPLELHLIN