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ClCG06G005000 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG06G005000
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionUnknown protein
Genome locationCG_Chr06:5681509..5684420
RNA-Seq ExpressionClCG06G005000
SyntenyClCG06G005000
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7013651.1 hypothetical protein SDJN02_23818, partial [Cucurbita argyrosperma subsp. argyrosperma]2.1e-1594.12Show/hide
Query:  RNSGPSSRMAVWIACAKTLLVFLPTKSSALIDSISQSVLKTTIKIETTHAI
        RNSGPSSRMAVW+ACAKTL VFLPTKSSALIDS SQSVLKTTIKIETTHAI
Subjt:  RNSGPSSRMAVWIACAKTLLVFLPTKSSALIDSISQSVLKTTIKIETTHAI
TrEMBL top hitse value%identityAlignment
A0A0A0KG99 Uncharacterized protein9.9e-2760.71Show/hide
Query:  MEIPFPYHSFPCMTVVFRSFHYYI-----------------------VVVVEMEFDWEGGGFNFLITSSRLSLKLE---ERRTPEMDD-RNSGPSSRMAV
        MEIP   HSFPCMTVVFRSFHYYI                       V    +    EG     LITSSRL LK E    ++    D  RNSGPSSRMAV
Subjt:  MEIPFPYHSFPCMTVVFRSFHYYI-----------------------VVVVEMEFDWEGGGFNFLITSSRLSLKLE---ERRTPEMDD-RNSGPSSRMAV

Query:  WIACAKTLLVFLPTKSSALIDSISQSVLKTTIKIETTHAI
        WIACAK LLVFLPTKSSALIDSISQSVLKTTIKIETTHAI
Subjt:  WIACAKTLLVFLPTKSSALIDSISQSVLKTTIKIETTHAI
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGATTCCATTTCCATATCACTCATTCCCCTGCATGACAGTCGTTTTCAGGTCGTTTCATTACTATATCGTCGTCGTCGTGGAAATGGAGTTTGATTGGGAAGGAGG
TGGATTCAACTTTTTAATTACTTCTTCCCGTTTGAGTTTGAAACTAGAAGAACGCCGTACCCCAGAAATGGATGACAGGAATTCAGGACCTTCCTCACGTATGGCTGTGT
GGATTGCATGTGCAAAGACGTTATTGGTGTTTTTGCCTACTAAGTCTTCGGCTTTGATTGACTCCATTTCCCAATCTGTGTTGAAGACCACTATTAAGATTGAGACCACA
CATGCCATCTGGGCTGCCAAAAGCCCGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGATTCCATTTCCATATCACTCATTCCCCTGCATGACAGTCGTTTTCAGGTCGTTTCATTACTATATCGTCGTCGTCGTGGAAATGGAGTTTGATTGGGAAGGAGG
TGGATTCAACTTTTTAATTACTTCTTCCCGTTTGAGTTTGAAACTAGAAGAACGCCGTACCCCAGAAATGGATGACAGGAATTCAGGACCTTCCTCACGTATGGCTGTGT
GGATTGCATGTGCAAAGACGTTATTGGTGTTTTTGCCTACTAAGTCTTCGGCTTTGATTGACTCCATTTCCCAATCTGTGTTGAAGACCACTATTAAGATTGAGACCACA
CATGCCATCTGGGCTGCCAAAAGCCCGTAG
Protein sequenceShow/hide protein sequence
MEIPFPYHSFPCMTVVFRSFHYYIVVVVEMEFDWEGGGFNFLITSSRLSLKLEERRTPEMDDRNSGPSSRMAVWIACAKTLLVFLPTKSSALIDSISQSVLKTTIKIETT
HAIWAAKSP