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ClCG06G005140 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG06G005140
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Descriptionprotein RALF-like 33
Genome locationCG_Chr06:5843795..5844178
RNA-Seq ExpressionClCG06G005140
SyntenyClCG06G005140
Gene Ontology termsGO:0019722 - calcium-mediated signaling (biological process)
GO:0005576 - extracellular region (cellular component)
InterPro domainsIPR008801 - Rapid ALkalinization Factor


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575064.1 Protein RALF-like 33, partial [Cucurbita argyrosperma subsp. sororia]1.5e-5688.19Show/hide
Query:  MGISRVSSLLAAFAIFAAYFLISSATAVDFSGDHNLLFVPTKSECRGSIAECFLAGNDDDSAFGMEFEMDSEINRRILATTRYISYGALRSNTVPCSRRG
        MGISRVS+L+AAFA+ AA+FLI SATA+DFSGD+ +LF PTKSECRGSIAECFLAGNDDDS FGMEFEMDSEINRRILATTRYISYGALR N VPCSRRG
Subjt:  MGISRVSSLLAAFAIFAAYFLISSATAVDFSGDHNLLFVPTKSECRGSIAECFLAGNDDDSAFGMEFEMDSEINRRILATTRYISYGALRSNTVPCSRRG

Query:  ASYYNCRPGAQANPYSRGCSAITRCRS
        ASYYNCRPGAQANPY+RGCSAITRCRS
Subjt:  ASYYNCRPGAQANPYSRGCSAITRCRS

XP_022959207.1 protein RALF-like 33 [Cucurbita moschata]5.9e-5687.4Show/hide
Query:  MGISRVSSLLAAFAIFAAYFLISSATAVDFSGDHNLLFVPTKSECRGSIAECFLAGNDDDSAFGMEFEMDSEINRRILATTRYISYGALRSNTVPCSRRG
        MGISRVS+L+AAFA+ AA+FLI SA A+DFSGD+ +LF PTKSECRGSIAECFLAGNDDDS FGMEFEMDSEINRRILATTRYISYGALR N VPCSRRG
Subjt:  MGISRVSSLLAAFAIFAAYFLISSATAVDFSGDHNLLFVPTKSECRGSIAECFLAGNDDDSAFGMEFEMDSEINRRILATTRYISYGALRSNTVPCSRRG

Query:  ASYYNCRPGAQANPYSRGCSAITRCRS
        ASYYNCRPGAQANPY+RGCSAITRCRS
Subjt:  ASYYNCRPGAQANPYSRGCSAITRCRS

XP_023006467.1 protein RALF-like 33 [Cucurbita maxima]1.0e-5587.4Show/hide
Query:  MGISRVSSLLAAFAIFAAYFLISSATAVDFSGDHNLLFVPTKSECRGSIAECFLAGNDDDSAFGMEFEMDSEINRRILATTRYISYGALRSNTVPCSRRG
        MGISRVS+L+AAFA+ AA+FLISSATA+DFSGD+ +LF PTKSECRGSI ECFLAGN DDS FGMEFEMDSEINRRILATTRYISYGALR N VPCSRRG
Subjt:  MGISRVSSLLAAFAIFAAYFLISSATAVDFSGDHNLLFVPTKSECRGSIAECFLAGNDDDSAFGMEFEMDSEINRRILATTRYISYGALRSNTVPCSRRG

Query:  ASYYNCRPGAQANPYSRGCSAITRCRS
        ASYYNCRPGAQANPY+RGCSAITRCRS
Subjt:  ASYYNCRPGAQANPYSRGCSAITRCRS

XP_023547686.1 protein RALF-like 33 [Cucurbita pepo subsp. pepo]3.4e-5687.4Show/hide
Query:  MGISRVSSLLAAFAIFAAYFLISSATAVDFSGDHNLLFVPTKSECRGSIAECFLAGNDDDSAFGMEFEMDSEINRRILATTRYISYGALRSNTVPCSRRG
        MGISRVS+L+AAF + AA+FLISSATA+DFSGD+ +LF PTKSECRGSIAECFLAGN+DDS FGMEFEMDSEINRRILATTRYISYGALR N VPCSRRG
Subjt:  MGISRVSSLLAAFAIFAAYFLISSATAVDFSGDHNLLFVPTKSECRGSIAECFLAGNDDDSAFGMEFEMDSEINRRILATTRYISYGALRSNTVPCSRRG

Query:  ASYYNCRPGAQANPYSRGCSAITRCRS
        ASYYNCRPGAQANPY+RGCSAITRCRS
Subjt:  ASYYNCRPGAQANPYSRGCSAITRCRS

XP_038875155.1 protein RALF-like 33 [Benincasa hispida]4.8e-5892.91Show/hide
Query:  MGISRVSSLLAAFAIFAAYFLISSATAVDFSGDHNLLFVPTKSECRGSIAECFLAGNDDDSAFGMEFEMDSEINRRILATTRYISYGALRSNTVPCSRRG
        MGISRVSSLLAA AI AA+FLISSATAVDFSGDH LLFVPTKSECRGSIAECFLAGNDDDSAFGMEF MDSEINRRILATTRYISYGALR N VPCSRRG
Subjt:  MGISRVSSLLAAFAIFAAYFLISSATAVDFSGDHNLLFVPTKSECRGSIAECFLAGNDDDSAFGMEFEMDSEINRRILATTRYISYGALRSNTVPCSRRG

Query:  ASYYNCRPGAQANPYSRGCSAITRCRS
        ASYYNCRPGAQANPY+RGC+AITRCRS
Subjt:  ASYYNCRPGAQANPYSRGCSAITRCRS

TrEMBL top hitse value%identityAlignment
A0A6J1C9N4 protein RALF-like 331.2e-5185.04Show/hide
Query:  MGISRVSSLLAAFAIFAAYFLISSATAVDFSGDHNLLFVPTKSECRGSIAECFLAGNDDDSAFGMEFEMDSEINRRILATTRYISYGALRSNTVPCSRRG
        M ISRVSSLLAAFAIFAA+ L+SSATA DFSGDH LL+VP KSECRGSIAEC LAG  DDS FG EFEMDSEINRRILAT RYISYGAL+ N+VPCSRRG
Subjt:  MGISRVSSLLAAFAIFAAYFLISSATAVDFSGDHNLLFVPTKSECRGSIAECFLAGNDDDSAFGMEFEMDSEINRRILATTRYISYGALRSNTVPCSRRG

Query:  ASYYNCRPGAQANPYSRGCSAITRCRS
        ASYYNC+PGAQANPY+RGCSAITRCRS
Subjt:  ASYYNCRPGAQANPYSRGCSAITRCRS

A0A6J1EV64 protein RALF-like 332.0e-4980.31Show/hide
Query:  MGISRVSSLLAAFAIFAAYFLISSATAVDFSGDHNLLFVPTKSECRGSIAECFLAGNDDDSAFGMEFEMDSEINRRILATTRYISYGALRSNTVPCSRRG
        M ISRV S LAA AI AA+FL+SSA AVDFSG   LLFVP +S+CRGSIAECFLAG+D+DSAFGMEFEMDSEINRRILA++RY+SYGAL+ N+VPCSRRG
Subjt:  MGISRVSSLLAAFAIFAAYFLISSATAVDFSGDHNLLFVPTKSECRGSIAECFLAGNDDDSAFGMEFEMDSEINRRILATTRYISYGALRSNTVPCSRRG

Query:  ASYYNCRPGAQANPYSRGCSAITRCRS
        ASYYNC+PGAQANPY RGC+AITRCRS
Subjt:  ASYYNCRPGAQANPYSRGCSAITRCRS

A0A6J1H3W7 protein RALF-like 332.8e-5687.4Show/hide
Query:  MGISRVSSLLAAFAIFAAYFLISSATAVDFSGDHNLLFVPTKSECRGSIAECFLAGNDDDSAFGMEFEMDSEINRRILATTRYISYGALRSNTVPCSRRG
        MGISRVS+L+AAFA+ AA+FLI SA A+DFSGD+ +LF PTKSECRGSIAECFLAGNDDDS FGMEFEMDSEINRRILATTRYISYGALR N VPCSRRG
Subjt:  MGISRVSSLLAAFAIFAAYFLISSATAVDFSGDHNLLFVPTKSECRGSIAECFLAGNDDDSAFGMEFEMDSEINRRILATTRYISYGALRSNTVPCSRRG

Query:  ASYYNCRPGAQANPYSRGCSAITRCRS
        ASYYNCRPGAQANPY+RGCSAITRCRS
Subjt:  ASYYNCRPGAQANPYSRGCSAITRCRS

A0A6J1KG89 protein RALF-like 331.2e-4980.31Show/hide
Query:  MGISRVSSLLAAFAIFAAYFLISSATAVDFSGDHNLLFVPTKSECRGSIAECFLAGNDDDSAFGMEFEMDSEINRRILATTRYISYGALRSNTVPCSRRG
        M ISRV S LAA AI AA+FL+SSA  VDFSGD  LLFVP +S+CRGSIAECFLAG+D+DSAFGMEFEMDSEINRRILA +RY+SYGAL+ N+VPCSRRG
Subjt:  MGISRVSSLLAAFAIFAAYFLISSATAVDFSGDHNLLFVPTKSECRGSIAECFLAGNDDDSAFGMEFEMDSEINRRILATTRYISYGALRSNTVPCSRRG

Query:  ASYYNCRPGAQANPYSRGCSAITRCRS
        ASYYNC+PGAQANPY RGC+AITRCRS
Subjt:  ASYYNCRPGAQANPYSRGCSAITRCRS

A0A6J1KVY0 protein RALF-like 334.9e-5687.4Show/hide
Query:  MGISRVSSLLAAFAIFAAYFLISSATAVDFSGDHNLLFVPTKSECRGSIAECFLAGNDDDSAFGMEFEMDSEINRRILATTRYISYGALRSNTVPCSRRG
        MGISRVS+L+AAFA+ AA+FLISSATA+DFSGD+ +LF PTKSECRGSI ECFLAGN DDS FGMEFEMDSEINRRILATTRYISYGALR N VPCSRRG
Subjt:  MGISRVSSLLAAFAIFAAYFLISSATAVDFSGDHNLLFVPTKSECRGSIAECFLAGNDDDSAFGMEFEMDSEINRRILATTRYISYGALRSNTVPCSRRG

Query:  ASYYNCRPGAQANPYSRGCSAITRCRS
        ASYYNCRPGAQANPY+RGCSAITRCRS
Subjt:  ASYYNCRPGAQANPYSRGCSAITRCRS

SwissProt top hitse value%identityAlignment
Q8L9P8 Protein RALF-like 331.5e-3368.14Show/hide
Query:  AIFAAYFLISSATAVDFSGDHNLLFVPTKSECRGSIAECFLAGNDDDSAFGMEFEMDSEINRRILATTRYISYGALRSNTVPCSRRGASYYNCRPGAQAN
        AI   +FL ++ T+   SGD    FVP +S+C G+IAEC L+  ++      EFEMDSEINRRILATT+YISYGALR NTVPCSRRGASYYNCR GAQAN
Subjt:  AIFAAYFLISSATAVDFSGDHNLLFVPTKSECRGSIAECFLAGNDDDSAFGMEFEMDSEINRRILATTRYISYGALRSNTVPCSRRGASYYNCRPGAQAN

Query:  PYSRGCSAITRCR
        PYSRGCSAITRCR
Subjt:  PYSRGCSAITRCR

Q945T0 Rapid alkalinization factor1.1e-2864.55Show/hide
Query:  FLISSATAVDFSGDHNLLFVPTKS--ECRGSIAECFLAGNDDDSAFGMEFEMDSEINRRILATTRYISYGALRSNTVPCSRRGASYYNCRPGAQANPYSR
        F IS A A D SG ++ + +P +S   C+GSI EC         A   EFE+DSE NRRILAT +YISYGAL+ N+VPCSRRGASYYNC+PGAQANPYSR
Subjt:  FLISSATAVDFSGDHNLLFVPTKS--ECRGSIAECFLAGNDDDSAFGMEFEMDSEINRRILATTRYISYGALRSNTVPCSRRGASYYNCRPGAQANPYSR

Query:  GCSAITRCRS
        GCSAITRCRS
Subjt:  GCSAITRCRS

Q9LUS7 Rapid alkalinization factor 232.5e-3359.42Show/hide
Query:  GISRVSSLLAAFAIFAA-----YFLISSATAVDFSGDHNLLFVPTKSECRGSIAECFLA---GNDDD-----SAFGMEFEMDSEINRRILATTRYISYGA
        G+SR S   A FAI        + +  S+ + +F+GD    F P ++ECRG+IAEC ++   G+  D        G EFEMDSEINRRILAT RYISYGA
Subjt:  GISRVSSLLAAFAIFAA-----YFLISSATAVDFSGDHNLLFVPTKSECRGSIAECFLA---GNDDD-----SAFGMEFEMDSEINRRILATTRYISYGA

Query:  LRSNTVPCSRRGASYYNCRPGAQANPYSRGCSAITRCR
        LR NT+PCSRRGASYYNCR GAQANPYSRGCSAITRCR
Subjt:  LRSNTVPCSRRGASYYNCRPGAQANPYSRGCSAITRCR

Q9MA62 Protein RALF-like 222.1e-2455.28Show/hide
Query:  AAFAIFAAYFLISSATAVDFSGD--HNLLFVPTKSE-----CRGSIAECFLAGNDDDSAFGMEFEMDSEINRRILATTRYISYGALRSNTVPCSRRGASY
        A +A+ A   ++ S  AV+ +GD   +L FV   S      C GSIAEC         A   E E DS+I+RRILA  +YISYGA+R N+VPCSRRGASY
Subjt:  AAFAIFAAYFLISSATAVDFSGD--HNLLFVPTKSE-----CRGSIAECFLAGNDDDSAFGMEFEMDSEINRRILATTRYISYGALRSNTVPCSRRGASY

Query:  YNCRPGAQANPYSRGCSAITRCR
        YNC+ GAQANPYSRGCS ITRCR
Subjt:  YNCRPGAQANPYSRGCSAITRCR

Q9SRY3 Protein RALF-like 11.6e-2453.23Show/hide
Query:  SLLAAFAIFAAYFLISSATAVDFSGDHNLLFVPTK----SECRGSIAECFLAGNDDDSAFGMEFEMDSEINRRILATTRYISYGALRSNTVPCSRRGASY
        +L     I   + + S      F+ D   +   T     S C GSIAEC  A          E EMDSEINRRILATT+YISY +L+ N+VPCSRRGASY
Subjt:  SLLAAFAIFAAYFLISSATAVDFSGDHNLLFVPTK----SECRGSIAECFLAGNDDDSAFGMEFEMDSEINRRILATTRYISYGALRSNTVPCSRRGASY

Query:  YNCRPGAQANPYSRGCSAITRCRS
        YNC+ GAQANPYSRGCS I RCRS
Subjt:  YNCRPGAQANPYSRGCSAITRCRS

Arabidopsis top hitse value%identityAlignment
AT1G02900.1 rapid alkalinization factor 11.2e-2553.23Show/hide
Query:  SLLAAFAIFAAYFLISSATAVDFSGDHNLLFVPTK----SECRGSIAECFLAGNDDDSAFGMEFEMDSEINRRILATTRYISYGALRSNTVPCSRRGASY
        +L     I   + + S      F+ D   +   T     S C GSIAEC  A          E EMDSEINRRILATT+YISY +L+ N+VPCSRRGASY
Subjt:  SLLAAFAIFAAYFLISSATAVDFSGDHNLLFVPTK----SECRGSIAECFLAGNDDDSAFGMEFEMDSEINRRILATTRYISYGALRSNTVPCSRRGASY

Query:  YNCRPGAQANPYSRGCSAITRCRS
        YNC+ GAQANPYSRGCS I RCRS
Subjt:  YNCRPGAQANPYSRGCSAITRCRS

AT2G33775.1 ralf-like 194.4e-1766.13Show/hide
Query:  MEFEMDSEINRRILATTR-YISYGALRSNTVPCSRRGASYYNCRPGAQANPYSRGCSAITRC
        +++ MDSE NRR LA  R YISYGALR N VPCSRRG SYY+C+   +ANPY RGCS IT C
Subjt:  MEFEMDSEINRRILATTR-YISYGALRSNTVPCSRRGASYYNCRPGAQANPYSRGCSAITRC

AT3G05490.1 ralf-like 221.5e-2555.28Show/hide
Query:  AAFAIFAAYFLISSATAVDFSGD--HNLLFVPTKSE-----CRGSIAECFLAGNDDDSAFGMEFEMDSEINRRILATTRYISYGALRSNTVPCSRRGASY
        A +A+ A   ++ S  AV+ +GD   +L FV   S      C GSIAEC         A   E E DS+I+RRILA  +YISYGA+R N+VPCSRRGASY
Subjt:  AAFAIFAAYFLISSATAVDFSGD--HNLLFVPTKSE-----CRGSIAECFLAGNDDDSAFGMEFEMDSEINRRILATTRYISYGALRSNTVPCSRRGASY

Query:  YNCRPGAQANPYSRGCSAITRCR
        YNC+ GAQANPYSRGCS ITRCR
Subjt:  YNCRPGAQANPYSRGCSAITRCR

AT3G16570.1 rapid alkalinization factor 231.8e-3459.42Show/hide
Query:  GISRVSSLLAAFAIFAA-----YFLISSATAVDFSGDHNLLFVPTKSECRGSIAECFLA---GNDDD-----SAFGMEFEMDSEINRRILATTRYISYGA
        G+SR S   A FAI        + +  S+ + +F+GD    F P ++ECRG+IAEC ++   G+  D        G EFEMDSEINRRILAT RYISYGA
Subjt:  GISRVSSLLAAFAIFAA-----YFLISSATAVDFSGDHNLLFVPTKSECRGSIAECFLA---GNDDD-----SAFGMEFEMDSEINRRILATTRYISYGA

Query:  LRSNTVPCSRRGASYYNCRPGAQANPYSRGCSAITRCR
        LR NT+PCSRRGASYYNCR GAQANPYSRGCSAITRCR
Subjt:  LRSNTVPCSRRGASYYNCRPGAQANPYSRGCSAITRCR

AT4G15800.1 ralf-like 331.0e-3468.14Show/hide
Query:  AIFAAYFLISSATAVDFSGDHNLLFVPTKSECRGSIAECFLAGNDDDSAFGMEFEMDSEINRRILATTRYISYGALRSNTVPCSRRGASYYNCRPGAQAN
        AI   +FL ++ T+   SGD    FVP +S+C G+IAEC L+  ++      EFEMDSEINRRILATT+YISYGALR NTVPCSRRGASYYNCR GAQAN
Subjt:  AIFAAYFLISSATAVDFSGDHNLLFVPTKSECRGSIAECFLAGNDDDSAFGMEFEMDSEINRRILATTRYISYGALRSNTVPCSRRGASYYNCRPGAQAN

Query:  PYSRGCSAITRCR
        PYSRGCSAITRCR
Subjt:  PYSRGCSAITRCR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAATCTCACGCGTTTCTTCTCTCCTTGCCGCCTTCGCTATTTTCGCCGCTTATTTTCTTATCTCATCAGCGACGGCCGTCGATTTCTCCGGCGACCACAACCTTCT
CTTCGTTCCAACCAAATCCGAGTGCCGAGGCTCAATCGCCGAGTGTTTTCTCGCCGGAAACGACGACGATTCCGCCTTCGGAATGGAGTTCGAGATGGACTCTGAGATCA
ATCGCCGAATTCTAGCGACGACTCGTTACATAAGCTACGGTGCTCTGAGAAGCAACACCGTTCCTTGCTCTCGCCGCGGCGCTTCTTATTACAACTGCAGACCAGGCGCT
CAGGCGAATCCTTACTCCCGTGGTTGCAGCGCCATTACTCGCTGCCGAAGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGAATCTCACGCGTTTCTTCTCTCCTTGCCGCCTTCGCTATTTTCGCCGCTTATTTTCTTATCTCATCAGCGACGGCCGTCGATTTCTCCGGCGACCACAACCTTCT
CTTCGTTCCAACCAAATCCGAGTGCCGAGGCTCAATCGCCGAGTGTTTTCTCGCCGGAAACGACGACGATTCCGCCTTCGGAATGGAGTTCGAGATGGACTCTGAGATCA
ATCGCCGAATTCTAGCGACGACTCGTTACATAAGCTACGGTGCTCTGAGAAGCAACACCGTTCCTTGCTCTCGCCGCGGCGCTTCTTATTACAACTGCAGACCAGGCGCT
CAGGCGAATCCTTACTCCCGTGGTTGCAGCGCCATTACTCGCTGCCGAAGTTAA
Protein sequenceShow/hide protein sequence
MGISRVSSLLAAFAIFAAYFLISSATAVDFSGDHNLLFVPTKSECRGSIAECFLAGNDDDSAFGMEFEMDSEINRRILATTRYISYGALRSNTVPCSRRGASYYNCRPGA
QANPYSRGCSAITRCRS