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ClCG06G005230 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG06G005230
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionDynein beta chain, ciliary protein
Genome locationCG_Chr06:5914044..5918905
RNA-Seq ExpressionClCG06G005230
SyntenyClCG06G005230
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7013632.1 hypothetical protein SDJN02_23799 [Cucurbita argyrosperma subsp. argyrosperma]4.7e-8485.19Show/hide
Query:  MGQAFRRAAGRIKPASSMDSTAASLKMESIVDRKPPPRVAEKALESRALDSGVVSGSDSGNVLEERDPQFDAMLSQMVGRIRSKPGGKLEMGEASVVERY
        MGQAFRRAAGRIKPASS+DS+A+SLKMES+VDRKPPPR AEKA ES ALDSG V GS+S NVLEERDPQFDAMLSQM GRIRSKPGGKLEMGEASVVERY
Subjt:  MGQAFRRAAGRIKPASSMDSTAASLKMESIVDRKPPPRVAEKALESRALDSGVVSGSDSGNVLEERDPQFDAMLSQMVGRIRSKPGGKLEMGEASVVERY

Query:  GRPMPKLRNTDIKSSKYEDRPAPPGTINVAQMRHIILLHQGKADDHDGPMGLHQIAERYNVSVAQIQTIFQFLSLPPEDSIREKKKDPK
         RPMP+LRNTD+KSSKYEDRPAPPGT+NVAQMRHIILLH+GKA+DHDGPMG++QIAERYNV VAQI+TI QFLSLPPEDS+++KKK  K
Subjt:  GRPMPKLRNTDIKSSKYEDRPAPPGTINVAQMRHIILLHQGKADDHDGPMGLHQIAERYNVSVAQIQTIFQFLSLPPEDSIREKKKDPK

XP_008458465.1 PREDICTED: uncharacterized protein LOC103497865 isoform X1 [Cucumis melo]1.6e-8487.89Show/hide
Query:  MGQAFRRAAGRIKPASSMDS-TAASLKMESIVDRKPPPRVAEKALESRALDSGVVSGSDSGNVLEERDPQFDAMLSQMVGRIRSKPGGKLEMGEASVVER
        MGQAFRRAAGRIKPASS+DS TA+SLKMESIVDRKPPPRVAEKA ES +LDSG V+ SDSGN LEERDPQFDAMLSQMVGRI+SKPGGKLEMGEASVVER
Subjt:  MGQAFRRAAGRIKPASSMDS-TAASLKMESIVDRKPPPRVAEKALESRALDSGVVSGSDSGNVLEERDPQFDAMLSQMVGRIRSKPGGKLEMGEASVVER

Query:  YGRPMPKLRNTDIKSSKYEDRPAPPGTINVAQMRHIILLHQGKADDHDGPMGLHQIAERYNVSVAQIQTIFQFLSLPPEDSIREKKKDPK
        YGRPMPKLR+T+IKSSKYEDRPAPPGT+NVAQMR IILLH+GKADDHDGPMG HQIAERYNVSVAQIQTI QFLSLPPEDS+R+K  D K
Subjt:  YGRPMPKLRNTDIKSSKYEDRPAPPGTINVAQMRHIILLHQGKADDHDGPMGLHQIAERYNVSVAQIQTIFQFLSLPPEDSIREKKKDPK

XP_011657169.1 uncharacterized protein LOC101223121 [Cucumis sativus]1.1e-8589.36Show/hide
Query:  MGQAFRRAAGRIKPASSMDS-TAASLKMESIVDRKPPPRVAEKALESRALDSGVVSGSDSGNVLEERDPQFDAMLSQMVGRIRSKPGGKLEMGEASVVER
        MGQAFRRAAGRIKPASS+DS TA+SLKMESIVDRKPPPRVAEKA ES ALDSG V  SDSGN+LEERDPQFDAMLSQMVGRI+SKPGGKLEMGEASVVER
Subjt:  MGQAFRRAAGRIKPASSMDS-TAASLKMESIVDRKPPPRVAEKALESRALDSGVVSGSDSGNVLEERDPQFDAMLSQMVGRIRSKPGGKLEMGEASVVER

Query:  YGRPMPKLRNTDIKSSKYEDRPAPPGTINVAQMRHIILLHQGKADDHDGPMGLHQIAERYNVSVAQIQTIFQFLSLPPEDSIREKKKD
        YGRPMPKLR+T+I SSKYEDRPAPPGT+NVAQMR IILLH+GKADDHDGPMGLHQIAERYNVSVAQIQTI QFLSLPPEDS+R+K KD
Subjt:  YGRPMPKLRNTDIKSSKYEDRPAPPGTINVAQMRHIILLHQGKADDHDGPMGLHQIAERYNVSVAQIQTIFQFLSLPPEDSIREKKKD

XP_022958820.1 uncharacterized protein LOC111459975 [Cucurbita moschata]6.1e-8485.19Show/hide
Query:  MGQAFRRAAGRIKPASSMDSTAASLKMESIVDRKPPPRVAEKALESRALDSGVVSGSDSGNVLEERDPQFDAMLSQMVGRIRSKPGGKLEMGEASVVERY
        MGQAFRRAAGRIKPASS+DS+A+SLKMES+VDRKPPPR AEKA ES ALDSG V GS+S NVLEERDPQFDAMLSQM GRIRSKPGGKLEMGEASVVERY
Subjt:  MGQAFRRAAGRIKPASSMDSTAASLKMESIVDRKPPPRVAEKALESRALDSGVVSGSDSGNVLEERDPQFDAMLSQMVGRIRSKPGGKLEMGEASVVERY

Query:  GRPMPKLRNTDIKSSKYEDRPAPPGTINVAQMRHIILLHQGKADDHDGPMGLHQIAERYNVSVAQIQTIFQFLSLPPEDSIREKKKDPK
         RPMP+LRNTD+KSSKYEDRPAPPGT+NVAQMRHI+LLH+GKA+DHDGPMG++QIAERYNV VAQI+TI QFLSLPPEDS+R+KKK  K
Subjt:  GRPMPKLRNTDIKSSKYEDRPAPPGTINVAQMRHIILLHQGKADDHDGPMGLHQIAERYNVSVAQIQTIFQFLSLPPEDSIREKKKDPK

XP_023006464.1 uncharacterized protein LOC111499180 [Cucurbita maxima]1.1e-8586.24Show/hide
Query:  MGQAFRRAAGRIKPASSMDSTAASLKMESIVDRKPPPRVAEKALESRALDSGVVSGSDSGNVLEERDPQFDAMLSQMVGRIRSKPGGKLEMGEASVVERY
        MGQAFRRAAGRIKPASS+DS+A+SLKMES+VDRKPPPR AEKA ES +LDSG V GS+SGNVLEERDPQFDAMLSQM GRIRSKPGGKLEMGEASVVERY
Subjt:  MGQAFRRAAGRIKPASSMDSTAASLKMESIVDRKPPPRVAEKALESRALDSGVVSGSDSGNVLEERDPQFDAMLSQMVGRIRSKPGGKLEMGEASVVERY

Query:  GRPMPKLRNTDIKSSKYEDRPAPPGTINVAQMRHIILLHQGKADDHDGPMGLHQIAERYNVSVAQIQTIFQFLSLPPEDSIREKKKDPK
         RPMPKLRNTD+KSSKYEDRPAPPGT+NVAQMRHIILLH+GKADDHDGPMG++QIAERYNV V+QI+TI QFLSLPPEDS+R+KKK  K
Subjt:  GRPMPKLRNTDIKSSKYEDRPAPPGTINVAQMRHIILLHQGKADDHDGPMGLHQIAERYNVSVAQIQTIFQFLSLPPEDSIREKKKDPK

TrEMBL top hitse value%identityAlignment
A0A0A0KCC5 Uncharacterized protein5.4e-8689.36Show/hide
Query:  MGQAFRRAAGRIKPASSMDS-TAASLKMESIVDRKPPPRVAEKALESRALDSGVVSGSDSGNVLEERDPQFDAMLSQMVGRIRSKPGGKLEMGEASVVER
        MGQAFRRAAGRIKPASS+DS TA+SLKMESIVDRKPPPRVAEKA ES ALDSG V  SDSGN+LEERDPQFDAMLSQMVGRI+SKPGGKLEMGEASVVER
Subjt:  MGQAFRRAAGRIKPASSMDS-TAASLKMESIVDRKPPPRVAEKALESRALDSGVVSGSDSGNVLEERDPQFDAMLSQMVGRIRSKPGGKLEMGEASVVER

Query:  YGRPMPKLRNTDIKSSKYEDRPAPPGTINVAQMRHIILLHQGKADDHDGPMGLHQIAERYNVSVAQIQTIFQFLSLPPEDSIREKKKD
        YGRPMPKLR+T+I SSKYEDRPAPPGT+NVAQMR IILLH+GKADDHDGPMGLHQIAERYNVSVAQIQTI QFLSLPPEDS+R+K KD
Subjt:  YGRPMPKLRNTDIKSSKYEDRPAPPGTINVAQMRHIILLHQGKADDHDGPMGLHQIAERYNVSVAQIQTIFQFLSLPPEDSIREKKKD

A0A1S3C957 uncharacterized protein LOC103497865 isoform X17.8e-8587.89Show/hide
Query:  MGQAFRRAAGRIKPASSMDS-TAASLKMESIVDRKPPPRVAEKALESRALDSGVVSGSDSGNVLEERDPQFDAMLSQMVGRIRSKPGGKLEMGEASVVER
        MGQAFRRAAGRIKPASS+DS TA+SLKMESIVDRKPPPRVAEKA ES +LDSG V+ SDSGN LEERDPQFDAMLSQMVGRI+SKPGGKLEMGEASVVER
Subjt:  MGQAFRRAAGRIKPASSMDS-TAASLKMESIVDRKPPPRVAEKALESRALDSGVVSGSDSGNVLEERDPQFDAMLSQMVGRIRSKPGGKLEMGEASVVER

Query:  YGRPMPKLRNTDIKSSKYEDRPAPPGTINVAQMRHIILLHQGKADDHDGPMGLHQIAERYNVSVAQIQTIFQFLSLPPEDSIREKKKDPK
        YGRPMPKLR+T+IKSSKYEDRPAPPGT+NVAQMR IILLH+GKADDHDGPMG HQIAERYNVSVAQIQTI QFLSLPPEDS+R+K  D K
Subjt:  YGRPMPKLRNTDIKSSKYEDRPAPPGTINVAQMRHIILLHQGKADDHDGPMGLHQIAERYNVSVAQIQTIFQFLSLPPEDSIREKKKDPK

A0A6J1C9H1 uncharacterized protein LOC1110095507.8e-7777.2Show/hide
Query:  MGQAFRRAAGRIKPASSMDSTAASLKMESIVDRKPPPRVAEKA-----LESRALDSGVVSGSDSGNVLEERDPQFDAMLSQMVGRIRSKPGGKLEMGEAS
        MGQAFRRAAGRIKPASS+DSTA+SLKMES+VDR+PPPR  +KA      ES ALDSG + GS+S NV EERDPQFDAML QMVGRI+SKPGGKLEMGEA+
Subjt:  MGQAFRRAAGRIKPASSMDSTAASLKMESIVDRKPPPRVAEKA-----LESRALDSGVVSGSDSGNVLEERDPQFDAMLSQMVGRIRSKPGGKLEMGEAS

Query:  VVERYGRPMPKLRNTDIKSSKYEDRPAPPGTINVAQMRHIILLHQGKADDHDGPMGLHQIAERYNVSVAQIQTIFQFLSLPPEDSIREKKKDP
        VVERY RPMPKLRNTD+KSS+YEDRPAPPGT+NVAQMRH+I LH+GKA+DH+G M + QIA+RYNVSV QI TI QFLSLPPED++R K KDP
Subjt:  VVERYGRPMPKLRNTDIKSSKYEDRPAPPGTINVAQMRHIILLHQGKADDHDGPMGLHQIAERYNVSVAQIQTIFQFLSLPPEDSIREKKKDP

A0A6J1H4J6 uncharacterized protein LOC1114599753.0e-8485.19Show/hide
Query:  MGQAFRRAAGRIKPASSMDSTAASLKMESIVDRKPPPRVAEKALESRALDSGVVSGSDSGNVLEERDPQFDAMLSQMVGRIRSKPGGKLEMGEASVVERY
        MGQAFRRAAGRIKPASS+DS+A+SLKMES+VDRKPPPR AEKA ES ALDSG V GS+S NVLEERDPQFDAMLSQM GRIRSKPGGKLEMGEASVVERY
Subjt:  MGQAFRRAAGRIKPASSMDSTAASLKMESIVDRKPPPRVAEKALESRALDSGVVSGSDSGNVLEERDPQFDAMLSQMVGRIRSKPGGKLEMGEASVVERY

Query:  GRPMPKLRNTDIKSSKYEDRPAPPGTINVAQMRHIILLHQGKADDHDGPMGLHQIAERYNVSVAQIQTIFQFLSLPPEDSIREKKKDPK
         RPMP+LRNTD+KSSKYEDRPAPPGT+NVAQMRHI+LLH+GKA+DHDGPMG++QIAERYNV VAQI+TI QFLSLPPEDS+R+KKK  K
Subjt:  GRPMPKLRNTDIKSSKYEDRPAPPGTINVAQMRHIILLHQGKADDHDGPMGLHQIAERYNVSVAQIQTIFQFLSLPPEDSIREKKKDPK

A0A6J1L288 uncharacterized protein LOC1114991805.4e-8686.24Show/hide
Query:  MGQAFRRAAGRIKPASSMDSTAASLKMESIVDRKPPPRVAEKALESRALDSGVVSGSDSGNVLEERDPQFDAMLSQMVGRIRSKPGGKLEMGEASVVERY
        MGQAFRRAAGRIKPASS+DS+A+SLKMES+VDRKPPPR AEKA ES +LDSG V GS+SGNVLEERDPQFDAMLSQM GRIRSKPGGKLEMGEASVVERY
Subjt:  MGQAFRRAAGRIKPASSMDSTAASLKMESIVDRKPPPRVAEKALESRALDSGVVSGSDSGNVLEERDPQFDAMLSQMVGRIRSKPGGKLEMGEASVVERY

Query:  GRPMPKLRNTDIKSSKYEDRPAPPGTINVAQMRHIILLHQGKADDHDGPMGLHQIAERYNVSVAQIQTIFQFLSLPPEDSIREKKKDPK
         RPMPKLRNTD+KSSKYEDRPAPPGT+NVAQMRHIILLH+GKADDHDGPMG++QIAERYNV V+QI+TI QFLSLPPEDS+R+KKK  K
Subjt:  GRPMPKLRNTDIKSSKYEDRPAPPGTINVAQMRHIILLHQGKADDHDGPMGLHQIAERYNVSVAQIQTIFQFLSLPPEDSIREKKKDPK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G21400.1 unknown protein7.5e-4852.08Show/hide
Query:  MGQAFRRAAGRIKPASSMDSTAASLKMESIVDRKPPPRVAEKALESRALDSGVVSGSDSG------NVLEERDPQFDAMLSQMVGRIRSKPGGKLEMGEA
        MGQ  RRA G+IK       +  S      +DR+  P     A++S    + V   SD G      NVLEERDP++D ML+QMVGRI++KPGGK EMGEA
Subjt:  MGQAFRRAAGRIKPASSMDSTAASLKMESIVDRKPPPRVAEKALESRALDSGVVSGSDSG------NVLEERDPQFDAMLSQMVGRIRSKPGGKLEMGEA

Query:  SVVERYGRPMPKLRNTDIKSSKYEDRPAPPGTINVAQMRHIILLHQGKADDHDGPMGLHQIAERYNVSVAQIQTIFQFLSLPPEDSIREKKK
        SVVE   RP+PKLRNT  +S++YE+ P P GT+NVAQ+RHI+LL QGK+ DH GPMG+++IAE+Y + V+Q+Q I QFLSLP E + ++KK+
Subjt:  SVVERYGRPMPKLRNTDIKSSKYEDRPAPPGTINVAQMRHIILLHQGKADDHDGPMGLHQIAERYNVSVAQIQTIFQFLSLPPEDSIREKKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCCCATTACGTGGAGAAATATCGGACCAGCCACGTTCGCCCTCCCAACACTATTTTATTTTTCTCATTGCGGCTCGAGTTTCGTACTCAGTAAAACCCGAG
TCACGACTCACCCGATTCCTCCTCTCTTCTCCATTTCCCCCTGAAATTGTCGTAAAACCCTCCGTCTCTTCGTTTTATGAGATCGTTGCTCGTTTCGAACAAGGA
AGGATGGGACAGGCATTTCGTCGAGCGGCTGGAAGAATCAAACCAGCTTCGAGTATGGATTCCACTGCCGCTTCGTTGAAAATGGAGAGCATCGTCGATCGGAAG
CCTCCGCCGCGTGTGGCCGAGAAGGCTCTGGAAAGCCGTGCGCTTGATTCTGGTGTTGTCTCGGGAAGTGATTCTGGAAATGTGCTTGAAGAACGAGATCCCCAA
TTTGACGCCATGCTTAGCCAAATGGTGGGTCGAATTAGATCAAAGCCTGGAGGAAAACTTGAGATGGGGGAGGCCTCTGTGGTGGAAAGGTACGGGAGACCAATG
CCAAAGCTAAGAAACACAGATATAAAATCGAGTAAATATGAGGATCGTCCAGCCCCACCAGGAACTATAAACGTAGCGCAGATGCGCCACATAATTCTCCTGCAT
CAAGGTAAGGCTGATGATCATGATGGCCCAATGGGACTTCACCAAATCGCTGAAAGGTATAATGTTAGTGTTGCTCAAATACAGACCATTTTCCAGTTTCTGTCT
CTCCCTCCAGAGGATAGTATTAGAGAGAAAAAGAAGGATCCTAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGTCCCATTACGTGGAGAAATATCGGACCAGCCACGTTCGCCCTCCCAACACTATTTTATTTTTCTCATTGCGGCTCGAGTTTCGTACTCAGTAAAACCCGAG
TCACGACTCACCCGATTCCTCCTCTCTTCTCCATTTCCCCCTGAAATTGTCGTAAAACCCTCCGTCTCTTCGTTTTATGAGATCGTTGCTCGTTTCGAACAAGGA
AGGATGGGACAGGCATTTCGTCGAGCGGCTGGAAGAATCAAACCAGCTTCGAGTATGGATTCCACTGCCGCTTCGTTGAAAATGGAGAGCATCGTCGATCGGAAG
CCTCCGCCGCGTGTGGCCGAGAAGGCTCTGGAAAGCCGTGCGCTTGATTCTGGTGTTGTCTCGGGAAGTGATTCTGGAAATGTGCTTGAAGAACGAGATCCCCAA
TTTGACGCCATGCTTAGCCAAATGGTGGGTCGAATTAGATCAAAGCCTGGAGGAAAACTTGAGATGGGGGAGGCCTCTGTGGTGGAAAGGTACGGGAGACCAATG
CCAAAGCTAAGAAACACAGATATAAAATCGAGTAAATATGAGGATCGTCCAGCCCCACCAGGAACTATAAACGTAGCGCAGATGCGCCACATAATTCTCCTGCAT
CAAGGTAAGGCTGATGATCATGATGGCCCAATGGGACTTCACCAAATCGCTGAAAGGTATAATGTTAGTGTTGCTCAAATACAGACCATTTTCCAGTTTCTGTCT
CTCCCTCCAGAGGATAGTATTAGAGAGAAAAAGAAGGATCCTAAATGACAGGAATGGAGCCAAGAAAACAAAGGAAGGGGCAATTGCTCCTAAGAAGCAAAAAAA
TAAAGGTTTCAAAAATTTTCTAAATGTTCTAGGGGGTCTTTAAACTTTCAATTGTGTGTGCGATAAATCATTGAATTTTTTATTTTGTGTCCGATA
Protein sequenceShow/hide protein sequence
MVPLRGEISDQPRSPSQHYFIFLIAARVSYSVKPESRLTRFLLSSPFPPEIVVKPSVSSFYEIVARFEQGRMGQAFRRAAGRIKPASSMDSTAASLKMESIVDRK
PPPRVAEKALESRALDSGVVSGSDSGNVLEERDPQFDAMLSQMVGRIRSKPGGKLEMGEASVVERYGRPMPKLRNTDIKSSKYEDRPAPPGTINVAQMRHIILLH
QGKADDHDGPMGLHQIAERYNVSVAQIQTIFQFLSLPPEDSIREKKKDPK