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ClCG06G005540 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG06G005540
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionNADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B-like
Genome locationCG_Chr06:6280894..6282620
RNA-Seq ExpressionClCG06G005540
SyntenyClCG06G005540
Gene Ontology termsGO:0006120 - mitochondrial electron transport, NADH to ubiquinone (biological process)
GO:0005747 - mitochondrial respiratory chain complex I (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593937.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B, partial [Cucurbita argyrosperma subsp. sororia]1.1e-0691.43Show/hide
Query:  MASVVDAAGDPIPTSAVVMSSSKHIANKCRSENVA
        MAS VDAAGDPIPTSAV+MSSSKHIAN CRSENVA
Subjt:  MASVVDAAGDPIPTSAVVMSSSKHIANKCRSENVA

XP_004135555.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B [Cucumis sativus]2.4e-0691.43Show/hide
Query:  MASVVDAAGDPIPTSAVVMSSSKHIANKCRSENVA
        MAS VDAAGDPIPTSAV+MSSSKHIA KCRSENVA
Subjt:  MASVVDAAGDPIPTSAVVMSSSKHIANKCRSENVA

XP_022930219.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B-like [Cucurbita moschata]1.1e-0691.43Show/hide
Query:  MASVVDAAGDPIPTSAVVMSSSKHIANKCRSENVA
        MAS VDAAGDPIPTSAV+MSSSKHIAN CRSENVA
Subjt:  MASVVDAAGDPIPTSAVVMSSSKHIANKCRSENVA

XP_022958837.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B-like [Cucurbita moschata]1.1e-0691.43Show/hide
Query:  MASVVDAAGDPIPTSAVVMSSSKHIANKCRSENVA
        MAS VDAAGDPIPTSAV+MSSSKHIAN CRSENVA
Subjt:  MASVVDAAGDPIPTSAVVMSSSKHIANKCRSENVA

XP_038893587.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B-like [Benincasa hispida]8.4e-0791.43Show/hide
Query:  MASVVDAAGDPIPTSAVVMSSSKHIANKCRSENVA
        MAS V+AAGDPIPTSAV+MSSSKHIANKCRSENVA
Subjt:  MASVVDAAGDPIPTSAVVMSSSKHIANKCRSENVA

TrEMBL top hitse value%identityAlignment
A0A5A7UKJ4 NADH dehydrogenase (Ubiquinone) 1 alpha subcomplex subunit 8-B-like1.2e-0691.43Show/hide
Query:  MASVVDAAGDPIPTSAVVMSSSKHIANKCRSENVA
        MAS VDAAGDPIPTSAV+MSSSKHIA KCRSENVA
Subjt:  MASVVDAAGDPIPTSAVVMSSSKHIANKCRSENVA

A0A6J1EWD6 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B-like5.3e-0791.43Show/hide
Query:  MASVVDAAGDPIPTSAVVMSSSKHIANKCRSENVA
        MAS VDAAGDPIPTSAV+MSSSKHIAN CRSENVA
Subjt:  MASVVDAAGDPIPTSAVVMSSSKHIANKCRSENVA

A0A6J1H2X4 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B-like5.3e-0791.43Show/hide
Query:  MASVVDAAGDPIPTSAVVMSSSKHIANKCRSENVA
        MAS VDAAGDPIPTSAV+MSSSKHIAN CRSENVA
Subjt:  MASVVDAAGDPIPTSAVVMSSSKHIANKCRSENVA

A0A6J1KIR7 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B-like5.3e-0791.43Show/hide
Query:  MASVVDAAGDPIPTSAVVMSSSKHIANKCRSENVA
        MAS VDAAGDPIPTSAV+MSSSKHIAN CRSENVA
Subjt:  MASVVDAAGDPIPTSAVVMSSSKHIANKCRSENVA

A0A6J1KXR2 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B-like5.3e-0791.43Show/hide
Query:  MASVVDAAGDPIPTSAVVMSSSKHIANKCRSENVA
        MAS VDAAGDPIPTSAV+MSSSKHIAN CRSENVA
Subjt:  MASVVDAAGDPIPTSAVVMSSSKHIANKCRSENVA

SwissProt top hitse value%identityAlignment
Q8LGE7 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B1.8e-0462.86Show/hide
Query:  MASVVDAAGDPIPTSAVVMSSSKHIANKCRSENVA
        M+S VDA G+PIPTSAV+ +S+KHI  +C  ENVA
Subjt:  MASVVDAAGDPIPTSAVVMSSSKHIANKCRSENVA

Arabidopsis top hitse value%identityAlignment
AT3G06310.1 Cox19-like CHCH family protein9.3e-0454.55Show/hide
Query:  SVVDAAGDPIPTSAVVMSSSKHIANKCRSENVA
        + VD  G+PIPTSAV+ +S+KHI  +C  EN+A
Subjt:  SVVDAAGDPIPTSAVVMSSSKHIANKCRSENVA

AT3G06310.2 Cox19-like CHCH family protein9.3e-0454.55Show/hide
Query:  SVVDAAGDPIPTSAVVMSSSKHIANKCRSENVA
        + VD  G+PIPTSAV+ +S+KHI  +C  EN+A
Subjt:  SVVDAAGDPIPTSAVVMSSSKHIANKCRSENVA

AT3G06310.3 Cox19-like CHCH family protein9.3e-0454.55Show/hide
Query:  SVVDAAGDPIPTSAVVMSSSKHIANKCRSENVA
        + VD  G+PIPTSAV+ +S+KHI  +C  EN+A
Subjt:  SVVDAAGDPIPTSAVVMSSSKHIANKCRSENVA

AT5G18800.1 Cox19-like CHCH family protein1.3e-0562.86Show/hide
Query:  MASVVDAAGDPIPTSAVVMSSSKHIANKCRSENVA
        M+S VDA G+PIPTSAV+ +S+KHI  +C  ENVA
Subjt:  MASVVDAAGDPIPTSAVVMSSSKHIANKCRSENVA

AT5G18800.2 Cox19-like CHCH family protein1.3e-0562.86Show/hide
Query:  MASVVDAAGDPIPTSAVVMSSSKHIANKCRSENVA
        M+S VDA G+PIPTSAV+ +S+KHI  +C  ENVA
Subjt:  MASVVDAAGDPIPTSAVVMSSSKHIANKCRSENVA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAGCGTAGTAGATGCTGCAGGAGATCCAATTCCTACATCGGCAGTGGTAATGTCCTCATCAAAGCACATTGCGAACAAGTGTCGATCGGAGAATGTGGCT
GTGGCATACCCTCCATTGCAAACACAAGGATTCCAACCCGGGGAAATGCCTCCACAAAGGCCATCAAGTCACTCGATGCGTCCTCTCCCTGTTGGAATCCCAAAG
AAGGTTAGAAGTTTTCGCCCGACATTTTTGCATGTGAAAATCAACACTTTGGATCACATTCAGAGGCGTTCCCCTGTGTATTTGGCGTTGCAATGGTGTGTTTGT
GCAGAGGAGATTCAAAGGATCTTGATAATTTATTTTGGAATTGTCAGTTCGTGCAATTGA
mRNA sequenceShow/hide mRNA sequence
TTTTTCATGGTGAAATTAGGAATTGATGAAACTAGAGAGAGATGGCGAGCGTAGTAGATGCTGCAGGAGATCCAATTCCTACATCGGCAGTGGTAATGTCCTCAT
CAAAGCACATTGCGAACAAGTGTCGATCGGAGAATGTGGCTGTGGCATACCCTCCATTGCAAACACAAGGATTCCAACCCGGGGAAATGCCTCCACAAAGGCCAT
CAAGTCACTCGATGCGTCCTCTCCCTGTTGGAATCCCAAAGAAGGTTAGAAGTTTTCGCCCGACATTTTTGCATGTGAAAATCAACACTTTGGATCACATTCAGA
GGCGTTCCCCTGTGTATTTGGCGTTGCAATGGTGTGTTTGTGCAGAGGAGATTCAAAGGATCTTGATAATTTATTTTGGAATTGTCAGTTCGTGCAATTGA
Protein sequenceShow/hide protein sequence
MASVVDAAGDPIPTSAVVMSSSKHIANKCRSENVAVAYPPLQTQGFQPGEMPPQRPSSHSMRPLPVGIPKKVRSFRPTFLHVKINTLDHIQRRSPVYLALQWCVC
AEEIQRILIIYFGIVSSCN