; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

ClCG06G007155 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG06G007155
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionGlial fibrillary acidic protein-like
Genome locationCG_Chr06:8734452..8735057
RNA-Seq ExpressionClCG06G007155
SyntenyClCG06G007155
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025321.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]4.6e-4351.24Show/hide
Query:  MKKKNKRLLRDVDVLHNEAETQKEYIKELQQELERMNKVVANFQSALEEQATSSQKIVAEVENLQNSAKEYKSQL-------------------------
        ++KKNKRLLR++  LH E E +K  I +L+ E+E++N +   FQ+AL EQA SSQ+    +E LQ+S +EYKSQL                         
Subjt:  MKKKNKRLLRDVDVLHNEAETQKEYIKELQQELERMNKVVANFQSALEEQATSSQKIVAEVENLQNSAKEYKSQL-------------------------

Query:  --TEVVTDDYAQLKKEYQEMSADFAVWRDEYSMLRRDYDNVRGQVEQGAEKLRQMAKMADQFATQATTLQQGIVPTRPDSKELSRFLGIIRQYLGRFGCY
           EV+TDDYAQL ++YQEMS DF +W+DEY  LRR YD+   ++E+GAEKLRQMA +ADQF+ QA TL+QG++PTR   +ELS FLGII Q LGRFGCY
Subjt:  --TEVVTDDYAQLKKEYQEMSADFAVWRDEYSMLRRDYDNVRGQVEQGAEKLRQMAKMADQFATQATTLQQGIVPTRPDSKELSRFLGIIRQYLGRFGCY

Query:  H
        H
Subjt:  H

KAA0033848.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]5.8e-3848.31Show/hide
Query:  KKKNKRLLRDVD-VLHNEAETQKEYI------KELQQELERMNKVVANFQSALEEQATSSQKIVAEVENLQNSAKEYKSQLT------------------
        ++KN + LR+++ VL  E E  +E +      KEL+ ELE ++KV  +FQSAL EQ TS+Q+I A +E LQNS KEYK ++T                  
Subjt:  KKKNKRLLRDVD-VLHNEAETQKEYI------KELQQELERMNKVVANFQSALEEQATSSQKIVAEVENLQNSAKEYKSQLT------------------

Query:  ---------EVVTDDYAQLKKEYQEMSADFAVWRDEYSMLRRDYDNVRGQVEQGAEKLRQMAKMADQFATQATTLQQGIVPTRPDSKELSRFLGIIRQYL
                 EVVT+D+A+LK E++E+ ADFA+WRDEY+++R  Y++V+GQ+EQG +KLR MA+ ADQF+T+   LQQ IVP +  S+ELSRFLGII  YL
Subjt:  ---------EVVTDDYAQLKKEYQEMSADFAVWRDEYSMLRRDYDNVRGQVEQGAEKLRQMAKMADQFATQATTLQQGIVPTRPDSKELSRFLGIIRQYL

Query:  GRFGCYH
        G FGCYH
Subjt:  GRFGCYH

KAA0046606.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]3.3e-3350.55Show/hide
Query:  MKKKNKRLLRDVDVLHNEAETQKEYIKELQQELERMNKVVANFQSALEEQATSSQKIVAEVEN--LQNSAKEYKSQL------TEVVTDDYAQLKKEYQE
        ++KKNKRLLR++  LH E E +K  +             +   Q ++EE    SQ I AE +N  LQ +    +SQL       +V+TDDYAQL ++YQE
Subjt:  MKKKNKRLLRDVDVLHNEAETQKEYIKELQQELERMNKVVANFQSALEEQATSSQKIVAEVEN--LQNSAKEYKSQL------TEVVTDDYAQLKKEYQE

Query:  MSADFAVWRDEYSMLRRDYDNVRGQVEQGAEKLRQMAKMADQFATQATTLQQGIVPTRPDSKELSRFLGIIRQYLGRFGCYH
        MS DF +W+DEY  LRR YD+  G++E+GAEKLRQMA++ADQF+ QA TL+QG++PTR   KELS FLGII Q LGRF CYH
Subjt:  MSADFAVWRDEYSMLRRDYDNVRGQVEQGAEKLRQMAKMADQFATQATTLQQGIVPTRPDSKELSRFLGIIRQYLGRFGCYH

KAA0065294.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]7.1e-4451.74Show/hide
Query:  MKKKNKRLLRDVDVLHNEAETQKEYIKELQQELERMNKVVANFQSALEEQATSSQKIVAEVENLQNSAKEYKSQL-------------------------
        M+KKNKRLLR++  LH E E +K  I +L+ E+E++N +   FQ+AL EQA SSQ+    +E LQ+  +EYKSQL                         
Subjt:  MKKKNKRLLRDVDVLHNEAETQKEYIKELQQELERMNKVVANFQSALEEQATSSQKIVAEVENLQNSAKEYKSQL-------------------------

Query:  --TEVVTDDYAQLKKEYQEMSADFAVWRDEYSMLRRDYDNVRGQVEQGAEKLRQMAKMADQFATQATTLQQGIVPTRPDSKELSRFLGIIRQYLGRFGCY
           EV+ DDYAQL ++YQEMS DF +W+DEY  LRR YD+  G++E+GAEKLRQMA++ADQF+ QA TL+QG++PTR   KELS FLGII Q LGRFGCY
Subjt:  --TEVVTDDYAQLKKEYQEMSADFAVWRDEYSMLRRDYDNVRGQVEQGAEKLRQMAKMADQFATQATTLQQGIVPTRPDSKELSRFLGIIRQYLGRFGCY

Query:  H
        H
Subjt:  H

TYK27025.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]4.0e-3155.32Show/hide
Query:  VENLQNSAKEYKSQL---------------------------TEVVTDDYAQLKKEYQEMSADFAVWRDEYSMLRRDYDNVRGQVEQGAEKLRQMAKMAD
        +E LQ+S KEYKSQL                            EV+TDDYAQL ++YQEMS DF +W+DEY  LRR YD+  G++E+GAEKLRQMA++AD
Subjt:  VENLQNSAKEYKSQL---------------------------TEVVTDDYAQLKKEYQEMSADFAVWRDEYSMLRRDYDNVRGQVEQGAEKLRQMAKMAD

Query:  QFATQATTLQQGIVPTRPDSKELSRFLGIIRQYLGRFGCYH
        QF  QA TL+QG++PTR   KELS FLGII Q LGRFGCYH
Subjt:  QFATQATTLQQGIVPTRPDSKELSRFLGIIRQYLGRFGCYH

TrEMBL top hitse value%identityAlignment
A0A5A7SM49 Glial fibrillary acidic protein-like2.2e-4351.24Show/hide
Query:  MKKKNKRLLRDVDVLHNEAETQKEYIKELQQELERMNKVVANFQSALEEQATSSQKIVAEVENLQNSAKEYKSQL-------------------------
        ++KKNKRLLR++  LH E E +K  I +L+ E+E++N +   FQ+AL EQA SSQ+    +E LQ+S +EYKSQL                         
Subjt:  MKKKNKRLLRDVDVLHNEAETQKEYIKELQQELERMNKVVANFQSALEEQATSSQKIVAEVENLQNSAKEYKSQL-------------------------

Query:  --TEVVTDDYAQLKKEYQEMSADFAVWRDEYSMLRRDYDNVRGQVEQGAEKLRQMAKMADQFATQATTLQQGIVPTRPDSKELSRFLGIIRQYLGRFGCY
           EV+TDDYAQL ++YQEMS DF +W+DEY  LRR YD+   ++E+GAEKLRQMA +ADQF+ QA TL+QG++PTR   +ELS FLGII Q LGRFGCY
Subjt:  --TEVVTDDYAQLKKEYQEMSADFAVWRDEYSMLRRDYDNVRGQVEQGAEKLRQMAKMADQFATQATTLQQGIVPTRPDSKELSRFLGIIRQYLGRFGCY

Query:  H
        H
Subjt:  H

A0A5A7TXA1 Glial fibrillary acidic protein-like1.6e-3350.55Show/hide
Query:  MKKKNKRLLRDVDVLHNEAETQKEYIKELQQELERMNKVVANFQSALEEQATSSQKIVAEVEN--LQNSAKEYKSQL------TEVVTDDYAQLKKEYQE
        ++KKNKRLLR++  LH E E +K  +             +   Q ++EE    SQ I AE +N  LQ +    +SQL       +V+TDDYAQL ++YQE
Subjt:  MKKKNKRLLRDVDVLHNEAETQKEYIKELQQELERMNKVVANFQSALEEQATSSQKIVAEVEN--LQNSAKEYKSQL------TEVVTDDYAQLKKEYQE

Query:  MSADFAVWRDEYSMLRRDYDNVRGQVEQGAEKLRQMAKMADQFATQATTLQQGIVPTRPDSKELSRFLGIIRQYLGRFGCYH
        MS DF +W+DEY  LRR YD+  G++E+GAEKLRQMA++ADQF+ QA TL+QG++PTR   KELS FLGII Q LGRF CYH
Subjt:  MSADFAVWRDEYSMLRRDYDNVRGQVEQGAEKLRQMAKMADQFATQATTLQQGIVPTRPDSKELSRFLGIIRQYLGRFGCYH

A0A5A7VDD9 Glial fibrillary acidic protein-like3.4e-4451.74Show/hide
Query:  MKKKNKRLLRDVDVLHNEAETQKEYIKELQQELERMNKVVANFQSALEEQATSSQKIVAEVENLQNSAKEYKSQL-------------------------
        M+KKNKRLLR++  LH E E +K  I +L+ E+E++N +   FQ+AL EQA SSQ+    +E LQ+  +EYKSQL                         
Subjt:  MKKKNKRLLRDVDVLHNEAETQKEYIKELQQELERMNKVVANFQSALEEQATSSQKIVAEVENLQNSAKEYKSQL-------------------------

Query:  --TEVVTDDYAQLKKEYQEMSADFAVWRDEYSMLRRDYDNVRGQVEQGAEKLRQMAKMADQFATQATTLQQGIVPTRPDSKELSRFLGIIRQYLGRFGCY
           EV+ DDYAQL ++YQEMS DF +W+DEY  LRR YD+  G++E+GAEKLRQMA++ADQF+ QA TL+QG++PTR   KELS FLGII Q LGRFGCY
Subjt:  --TEVVTDDYAQLKKEYQEMSADFAVWRDEYSMLRRDYDNVRGQVEQGAEKLRQMAKMADQFATQATTLQQGIVPTRPDSKELSRFLGIIRQYLGRFGCY

Query:  H
        H
Subjt:  H

A0A5D3BQ93 Glial fibrillary acidic protein-like2.8e-3848.31Show/hide
Query:  KKKNKRLLRDVD-VLHNEAETQKEYI------KELQQELERMNKVVANFQSALEEQATSSQKIVAEVENLQNSAKEYKSQLT------------------
        ++KN + LR+++ VL  E E  +E +      KEL+ ELE ++KV  +FQSAL EQ TS+Q+I A +E LQNS KEYK ++T                  
Subjt:  KKKNKRLLRDVD-VLHNEAETQKEYI------KELQQELERMNKVVANFQSALEEQATSSQKIVAEVENLQNSAKEYKSQLT------------------

Query:  ---------EVVTDDYAQLKKEYQEMSADFAVWRDEYSMLRRDYDNVRGQVEQGAEKLRQMAKMADQFATQATTLQQGIVPTRPDSKELSRFLGIIRQYL
                 EVVT+D+A+LK E++E+ ADFA+WRDEY+++R  Y++V+GQ+EQG +KLR MA+ ADQF+T+   LQQ IVP +  S+ELSRFLGII  YL
Subjt:  ---------EVVTDDYAQLKKEYQEMSADFAVWRDEYSMLRRDYDNVRGQVEQGAEKLRQMAKMADQFATQATTLQQGIVPTRPDSKELSRFLGIIRQYL

Query:  GRFGCYH
        G FGCYH
Subjt:  GRFGCYH

A0A5D3DUN1 Glial fibrillary acidic protein-like1.9e-3155.32Show/hide
Query:  VENLQNSAKEYKSQL---------------------------TEVVTDDYAQLKKEYQEMSADFAVWRDEYSMLRRDYDNVRGQVEQGAEKLRQMAKMAD
        +E LQ+S KEYKSQL                            EV+TDDYAQL ++YQEMS DF +W+DEY  LRR YD+  G++E+GAEKLRQMA++AD
Subjt:  VENLQNSAKEYKSQL---------------------------TEVVTDDYAQLKKEYQEMSADFAVWRDEYSMLRRDYDNVRGQVEQGAEKLRQMAKMAD

Query:  QFATQATTLQQGIVPTRPDSKELSRFLGIIRQYLGRFGCYH
        QF  QA TL+QG++PTR   KELS FLGII Q LGRFGCYH
Subjt:  QFATQATTLQQGIVPTRPDSKELSRFLGIIRQYLGRFGCYH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAAAGAAGAATAAGAGATTGCTAAGAGATGTTGATGTTCTGCACAATGAGGCGGAAACACAAAAGGAGTACATCAAAGAGTTACAACAAGAGTTGGAGAGAATGAA
CAAAGTCGTTGCAAATTTTCAAAGCGCCTTAGAAGAGCAGGCCACATCATCCCAAAAGATTGTTGCAGAGGTTGAGAATCTACAGAATTCAGCCAAAGAATATAAATCCC
AGCTTACTGAGGTGGTGACAGATGACTATGCTCAACTGAAGAAGGAATATCAGGAAATGTCAGCTGATTTTGCAGTATGGAGAGATGAGTATAGTATGTTAAGACGCGAT
TACGATAATGTCAGAGGGCAGGTAGAACAAGGAGCCGAGAAATTAAGGCAGATGGCAAAGATGGCTGATCAATTCGCAACACAGGCTACAACCCTCCAACAAGGCATCGT
ACCCACGCGACCTGACAGCAAGGAGTTGTCTCGTTTTCTAGGGATCATAAGGCAATACCTTGGGCGTTTTGGGTGCTATCATTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAAAAGAAGAATAAGAGATTGCTAAGAGATGTTGATGTTCTGCACAATGAGGCGGAAACACAAAAGGAGTACATCAAAGAGTTACAACAAGAGTTGGAGAGAATGAA
CAAAGTCGTTGCAAATTTTCAAAGCGCCTTAGAAGAGCAGGCCACATCATCCCAAAAGATTGTTGCAGAGGTTGAGAATCTACAGAATTCAGCCAAAGAATATAAATCCC
AGCTTACTGAGGTGGTGACAGATGACTATGCTCAACTGAAGAAGGAATATCAGGAAATGTCAGCTGATTTTGCAGTATGGAGAGATGAGTATAGTATGTTAAGACGCGAT
TACGATAATGTCAGAGGGCAGGTAGAACAAGGAGCCGAGAAATTAAGGCAGATGGCAAAGATGGCTGATCAATTCGCAACACAGGCTACAACCCTCCAACAAGGCATCGT
ACCCACGCGACCTGACAGCAAGGAGTTGTCTCGTTTTCTAGGGATCATAAGGCAATACCTTGGGCGTTTTGGGTGCTATCATTAG
Protein sequenceShow/hide protein sequence
MKKKNKRLLRDVDVLHNEAETQKEYIKELQQELERMNKVVANFQSALEEQATSSQKIVAEVENLQNSAKEYKSQLTEVVTDDYAQLKKEYQEMSADFAVWRDEYSMLRRD
YDNVRGQVEQGAEKLRQMAKMADQFATQATTLQQGIVPTRPDSKELSRFLGIIRQYLGRFGCYH