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ClCG06G007570 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG06G007570
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionS-protein homolog
Genome locationCG_Chr06:9404625..9405015
RNA-Seq ExpressionClCG06G007570
SyntenyClCG06G007570
Gene Ontology termsGO:0110165 - cellular anatomical structure (cellular component)
InterPro domainsIPR010264 - Plant self-incompatibility S1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0059530.1 pumilio-like protein 15-like [Cucumis melo var. makuwa]1.2e-1077.08Show/hide
Query:  SLFTIEGKPFQSPLVNVNITNAL--KGKLTVHCKSADDDFGFHQLPPL
        +LFT EGKPFQ+PLV VNITNAL  K +LTVHCKSADDD G HQL PL
Subjt:  SLFTIEGKPFQSPLVNVNITNAL--KGKLTVHCKSADDDFGFHQLPPL

KGN61530.1 hypothetical protein Csa_006387 [Cucumis sativus]3.7e-2045.32Show/hide
Query:  MGSFSTFALCLLILVFFTSLFTIEGKPFQSPLVNVNITNALK---GKLTVHCKSADDDFGFHQLPPLVIPSNGL------------------VGHITSIF
        M SFSTF L L I + F ++FTIEGKPFQSP V VNITNALK    +LT+HCKS DDD G HQL  L   +                       H  +I+
Subjt:  MGSFSTFALCLLILVFFTSLFTIEGKPFQSPLVNVNITNALK---GKLTVHCKSADDDFGFHQLPPLVIPSNGL------------------VGHITSIF

Query:  TRMQ---KIEIVAMNLFVGEQGICMFNNGTKKYDICYTW
          ++   K         VGEQG+CMF+  T  YDICYTW
Subjt:  TRMQ---KIEIVAMNLFVGEQGICMFNNGTKKYDICYTW

XP_008465559.1 PREDICTED: pumilio homolog 15-like, partial [Cucumis melo]1.7e-1748.76Show/hide
Query:  LFTIEGKPFQSPLVNVNITNAL--KGKLTVHCKSADDDFGFHQLPPL----VIPSNGLVG--------------HITSIF-TRMQKIEIVAMNLF-VGEQ
        LFTIEGKPFQ+PLV VNITNAL  K +LTVHCKS DDD G HQL PL           +G              H   I+     +     + L+ VGEQ
Subjt:  LFTIEGKPFQSPLVNVNITNAL--KGKLTVHCKSADDDFGFHQLPPL----VIPSNGLVG--------------HITSIF-TRMQKIEIVAMNLF-VGEQ

Query:  GICMFNNGTKKYDICYTWLVK
        G+CMF+  TKKYD CYTW+ K
Subjt:  GICMFNNGTKKYDICYTWLVK

XP_022138779.1 S-protein homolog 5 [Momordica charantia]1.1e-1137.59Show/hide
Query:  STFALCLLILVFFTSL-FTIEGKPFQSPLVNVNITNALKG--KLTVHCKSADDDFGFHQLPPLV-----IPSNGLVG-------------HITSIFTRMQ
        ++  L L  LV F+++   +E     S   +VNITN L+   +LTVHCKS DDD GFHQLPPL+        N  +              H   I+ + +
Subjt:  STFALCLLILVFFTSL-FTIEGKPFQSPLVNVNITNALKG--KLTVHCKSADDDFGFHQLPPLV-----IPSNGLVG-------------HITSIFTRMQ

Query:  KIEIVAMNLF-VGEQGICMFNNGTKKYDICYTW
          ++  + L+ VGE+G+C++N+ T KYDICYTW
Subjt:  KIEIVAMNLF-VGEQGICMFNNGTKKYDICYTW

XP_023522352.1 S-protein homolog 5-like, partial [Cucurbita pepo subsp. pepo]2.9e-0958.21Show/hide
Query:  MGSFSTFALCLLILVFFTSLF-TIEGKPFQSPLVNVNITNALK--GKLTVHCKSADDDFGFHQLPPL
        M SFST A  LL+ +FFT+LF TI+G  F+ P + VNITN LK   +L V CKS+DDD   HQLPPL
Subjt:  MGSFSTFALCLLILVFFTSLF-TIEGKPFQSPLVNVNITNALK--GKLTVHCKSADDDFGFHQLPPL

TrEMBL top hitse value%identityAlignment
A0A0A0LI28 S-protein homolog1.8e-2045.32Show/hide
Query:  MGSFSTFALCLLILVFFTSLFTIEGKPFQSPLVNVNITNALK---GKLTVHCKSADDDFGFHQLPPLVIPSNGL------------------VGHITSIF
        M SFSTF L L I + F ++FTIEGKPFQSP V VNITNALK    +LT+HCKS DDD G HQL  L   +                       H  +I+
Subjt:  MGSFSTFALCLLILVFFTSLFTIEGKPFQSPLVNVNITNALK---GKLTVHCKSADDDFGFHQLPPLVIPSNGL------------------VGHITSIF

Query:  TRMQ---KIEIVAMNLFVGEQGICMFNNGTKKYDICYTW
          ++   K         VGEQG+CMF+  T  YDICYTW
Subjt:  TRMQ---KIEIVAMNLFVGEQGICMFNNGTKKYDICYTW

A0A1S3CDK4 S-protein homolog3.0e-0735.51Show/hide
Query:  VNVNITNALKG---KLTVHCKSADDDFGFHQLPPLVIPSNGLVGHI---TSIFTRMQ------------------KIEIVAMNLFVGEQGICMFNNGTKK
        + VNITN + G   +LTVHCKS DDD G H+LP LV  +     +    T  + + Q                  +         + E+GICMFN  TK 
Subjt:  VNVNITNALKG---KLTVHCKSADDDFGFHQLPPLVIPSNGLVGHI---TSIFTRMQ------------------KIEIVAMNLFVGEQGICMFNNGTKK

Query:  YDICYTW
        YD CY W
Subjt:  YDICYTW

A0A1S3CP53 S-protein homolog8.3e-1848.76Show/hide
Query:  LFTIEGKPFQSPLVNVNITNAL--KGKLTVHCKSADDDFGFHQLPPL----VIPSNGLVG--------------HITSIF-TRMQKIEIVAMNLF-VGEQ
        LFTIEGKPFQ+PLV VNITNAL  K +LTVHCKS DDD G HQL PL           +G              H   I+     +     + L+ VGEQ
Subjt:  LFTIEGKPFQSPLVNVNITNAL--KGKLTVHCKSADDDFGFHQLPPL----VIPSNGLVG--------------HITSIF-TRMQKIEIVAMNLF-VGEQ

Query:  GICMFNNGTKKYDICYTWLVK
        G+CMF+  TKKYD CYTW+ K
Subjt:  GICMFNNGTKKYDICYTWLVK

A0A5A7UWN1 S-protein homolog5.8e-1177.08Show/hide
Query:  SLFTIEGKPFQSPLVNVNITNAL--KGKLTVHCKSADDDFGFHQLPPL
        +LFT EGKPFQ+PLV VNITNAL  K +LTVHCKSADDD G HQL PL
Subjt:  SLFTIEGKPFQSPLVNVNITNAL--KGKLTVHCKSADDDFGFHQLPPL

A0A6J1CB24 S-protein homolog5.2e-1237.59Show/hide
Query:  STFALCLLILVFFTSL-FTIEGKPFQSPLVNVNITNALKG--KLTVHCKSADDDFGFHQLPPLV-----IPSNGLVG-------------HITSIFTRMQ
        ++  L L  LV F+++   +E     S   +VNITN L+   +LTVHCKS DDD GFHQLPPL+        N  +              H   I+ + +
Subjt:  STFALCLLILVFFTSL-FTIEGKPFQSPLVNVNITNALKG--KLTVHCKSADDDFGFHQLPPLV-----IPSNGLVG-------------HITSIFTRMQ

Query:  KIEIVAMNLF-VGEQGICMFNNGTKKYDICYTW
          ++  + L+ VGE+G+C++N+ T KYDICYTW
Subjt:  KIEIVAMNLF-VGEQGICMFNNGTKKYDICYTW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G06020.1 Plant self-incompatibility protein S1 family1.0e-0434.92Show/hide
Query:  MGSFSTFALCLLILVFFT--SLFTIEGKPF--QSPLVNVNITNALKGKLTVHCKSADDDFGFH
        + +FS+     ++++F T    F  +G+PF  + PL  + + N     L +HCKS DDD GFH
Subjt:  MGSFSTFALCLLILVFFT--SLFTIEGKPF--QSPLVNVNITNALKGKLTVHCKSADDDFGFH

AT5G06030.1 Plant self-incompatibility protein S1 family6.8e-0450Show/hide
Query:  KPFQSPLVNVNITNALKGKLTVHCKSADDDFGFHQL
        +PF+  L  V I N     L +HCKS DDD GFH L
Subjt:  KPFQSPLVNVNITNALKGKLTVHCKSADDDFGFHQL

AT5G12060.1 Plant self-incompatibility protein S1 family6.8e-0430.19Show/hide
Query:  VNITNALKGKLT--VHCKSADDDFGFHQLPP----------LVIPSNGLVGHIT--------SIFTRMQ---KIEIVAMNLF--VGEQGICMFNNGTKKY
        V ITN L   LT  +HCKSADDD G   L P           ++ +     H T         I+   +   +  I  +N    +  QG CMF+     +
Subjt:  VNITNALKGKLT--VHCKSADDDFGFHQLPP----------LVIPSNGLVGHIT--------SIFTRMQ---KIEIVAMNLF--VGEQGICMFNNGTKKY

Query:  DICYTW
        +ICY W
Subjt:  DICYTW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTCATTCTCAACATTTGCACTATGCCTTTTGATATTAGTGTTTTTCACTAGCCTATTCACAATTGAAGGAAAACCCTTCCAATCCCCACTGGTTAACGTT
AACATAACAAATGCTCTAAAAGGTAAACTAACTGTTCACTGCAAATCTGCCGATGATGACTTTGGATTCCACCAACTCCCACCATTGGTTATACCTTCCAATGGC
CTGGTTGGTCACATTACTTCGATATTTACAAGGATGCAAAAGATAGAGATTGTTGCAATGAACCTCTTTGTGGGTGAACAAGGCATCTGTATGTTCAACAATGGC
ACCAAAAAGTATGATATTTGCTATACATGGTTGGTTAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGGTTCATTCTCAACATTTGCACTATGCCTTTTGATATTAGTGTTTTTCACTAGCCTATTCACAATTGAAGGAAAACCCTTCCAATCCCCACTGGTTAACGTT
AACATAACAAATGCTCTAAAAGGTAAACTAACTGTTCACTGCAAATCTGCCGATGATGACTTTGGATTCCACCAACTCCCACCATTGGTTATACCTTCCAATGGC
CTGGTTGGTCACATTACTTCGATATTTACAAGGATGCAAAAGATAGAGATTGTTGCAATGAACCTCTTTGTGGGTGAACAAGGCATCTGTATGTTCAACAATGGC
ACCAAAAAGTATGATATTTGCTATACATGGTTGGTTAAATGA
Protein sequenceShow/hide protein sequence
MGSFSTFALCLLILVFFTSLFTIEGKPFQSPLVNVNITNALKGKLTVHCKSADDDFGFHQLPPLVIPSNGLVGHITSIFTRMQKIEIVAMNLFVGEQGICMFNNG
TKKYDICYTWLVK